Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10729
Gene name
LocationContig_898:7026..8821
Strand+
Gene length (bp)1795
Transcript length (bp)1281
Coding sequence length (bp)1281
Protein length (aa) 427

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01494 FAD_binding_3 FAD binding domain 3.5E-26 6 365
PF05834 Lycopene_cycl Lycopene cyclase protein 5.2E-06 7 182

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9F131|3HBH1_PSEAC 3-hydroxybenzoate 6-hydroxylase 1 OS=Pseudomonas alcaligenes GN=xlnD PE=1 SV=1 7 409 4.0E-24
sp|Q02N79|PQSH_PSEAB 2-heptyl-3-hydroxy-4(1H)-quinolone synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pqsH PE=1 SV=1 8 393 8.0E-23
sp|Q9I0Q0|PQSH_PSEAE 2-heptyl-3-hydroxy-4(1H)-quinolone synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=pqsH PE=3 SV=1 8 393 9.0E-23
sp|Q53552|NHG2_PSEPU Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=4 SV=1 8 400 2.0E-21
sp|P23262|NHG1_PSEPU Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=1 SV=4 23 400 1.0E-20
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Swissprot ID Swissprot Description Start End E-value
sp|Q9F131|3HBH1_PSEAC 3-hydroxybenzoate 6-hydroxylase 1 OS=Pseudomonas alcaligenes GN=xlnD PE=1 SV=1 7 409 4.0E-24
sp|Q02N79|PQSH_PSEAB 2-heptyl-3-hydroxy-4(1H)-quinolone synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pqsH PE=1 SV=1 8 393 8.0E-23
sp|Q9I0Q0|PQSH_PSEAE 2-heptyl-3-hydroxy-4(1H)-quinolone synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=pqsH PE=3 SV=1 8 393 9.0E-23
sp|Q53552|NHG2_PSEPU Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=4 SV=1 8 400 2.0E-21
sp|P23262|NHG1_PSEPU Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=1 SV=4 23 400 1.0E-20
sp|P86491|6HN3M_PSEFL 6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas fluorescens PE=1 SV=1 26 378 1.0E-17
sp|Q88FY2|6HN3M_PSEPK 6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas putida (strain KT2440) GN=nicC PE=1 SV=1 8 378 3.0E-17
sp|B6D1N4|HPXO_KLEPN FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae GN=hpxO PE=3 SV=1 9 362 1.0E-16
sp|A6T923|HPXO_KLEP7 FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hpxO PE=1 SV=1 9 362 2.0E-16
sp|O81360|ABA2_PRUAR Zeaxanthin epoxidase, chloroplastic OS=Prunus armeniaca PE=2 SV=1 8 384 5.0E-16
sp|Q5EXK1|3HBH_KLEOX 3-hydroxybenzoate 6-hydroxylase OS=Klebsiella oxytoca GN=mhbM PE=1 SV=1 22 409 7.0E-16
sp|C3VEQ2|ZEP_ONCHC Zeaxanthin epoxidase, chloroplastic OS=Oncidium hybrid cultivar GN=ZEP PE=2 SV=1 88 384 2.0E-15
sp|P93236|ABA2_SOLLC Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1 8 384 2.0E-15
sp|Q3S4B7|3HBH_POLNA 3-hydroxybenzoate 6-hydroxylase OS=Polaromonas naphthalenivorans (strain CJ2) GN=nagX PE=1 SV=1 28 409 3.0E-15
sp|Q0JCU7|ZEP_ORYSJ Zeaxanthin epoxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=ZEP PE=2 SV=1 8 384 7.0E-15
sp|Q40412|ABA2_NICPL Zeaxanthin epoxidase, chloroplastic OS=Nicotiana plumbaginifolia GN=ABA2 PE=1 SV=1 8 384 2.0E-14
sp|Q96375|ABA2_CAPAN Zeaxanthin epoxidase, chloroplastic OS=Capsicum annuum PE=2 SV=1 8 384 1.0E-13
sp|Q9FGC7|ZEP_ARATH Zeaxanthin epoxidase, chloroplastic OS=Arabidopsis thaliana GN=ZEP PE=1 SV=1 8 336 4.0E-12
sp|B5B0J6|HPXO_KLEOX FAD-dependent urate hydroxylase OS=Klebsiella oxytoca GN=hpxO PE=3 SV=1 18 362 3.0E-11
sp|A4XD40|KMO_SALTO Kynurenine 3-monooxygenase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=kmo PE=3 SV=1 12 405 8.0E-11
sp|Q0QFQ1|3HBH2_PSEAC 3-hydroxybenzoate 6-hydroxylase 2 OS=Pseudomonas alcaligenes GN=hbzD PE=2 SV=1 103 408 2.0E-10
sp|Q476N1|MHPA_CUPPJ 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=mhpA PE=3 SV=1 1 335 6.0E-10
sp|A8LVF4|KMO_SALAI Kynurenine 3-monooxygenase OS=Salinispora arenicola (strain CNS-205) GN=kmo PE=3 SV=1 12 417 2.0E-08
sp|A4JPY1|MHPA1_BURVG 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase 1 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mhpA1 PE=3 SV=1 3 367 6.0E-08
sp|O06489|YETM_BACSU Putative oxidoreductase YetM OS=Bacillus subtilis (strain 168) GN=yetM PE=3 SV=1 25 366 2.0E-07
sp|A1TCX2|MHPA_MYCVP 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=mhpA PE=3 SV=1 12 396 2.0E-07
sp|Q93NG3|DHPH_ARTNI 2,6-dihydroxypyridine 3-monooxygenase OS=Arthrobacter nicotinovorans GN=dhpH PE=1 SV=1 1 338 3.0E-07
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GO

GO Term Description Terminal node
GO:0071949 FAD binding Yes
GO:1901265 nucleoside phosphate binding No
GO:0050662 coenzyme binding No
GO:1901363 heterocyclic compound binding No
GO:0048037 cofactor binding No
GO:0036094 small molecule binding No
GO:0043167 ion binding No
GO:0000166 nucleotide binding No
GO:0097159 organic cyclic compound binding No
GO:0050660 flavin adenine dinucleotide binding No
GO:0003674 molecular_function No
GO:0043168 anion binding No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 386 408 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10729
MTTVDADIIIVGAGIGGLALAAICRQLGISYTVLERAATLQPVGAGISLAPNALRVLDQLGLYAELLRTSQKMGR
LQIWRNERQWNTVSFAGVEPAYGYPVLSTERHAFHRLLYAAAGAEERVVLGAKVVDVVDEPGAGPARVVVEGGRE
YRGRIVVGADGIRSAVRRALQRKNGLEAAANTIRFTGRVHFSGYTRPLDHCGPAEVGVGNWMLYDRTILTTWPCR
DNRQWYIGVKMAEGDVDKNRSVWGSITPDDIKKVYGKAFHPFAEDKQFGSIVDKSERVIASNVFQEVDFPSMYDG
RVALLGDAAHSMTSFFGQGGCQAIEDAAVLGNLLAENRSSLDRPHELLALYAKTREPRTQDLSRFSDRFAMLHTA
RLPYGLGPFVRWLLYTLVPSWFWVWYLGWLYGYQPRVTALDKPSIYGRDKA*
Coding >Hirsu2|10729
ATGACGACGGTCGACGCGGACATCATCATCGTCGGCGCGGGCATCGGCGGCCTCGCGCTGGCGGCCATCTGCCGG
CAGCTGGGCATCTCGTACACGGTGCTGGAGCGGGCGGCGACGCTGCAGCCGGTGGGCGCGGGCATCTCGCTGGCG
CCCAACGCGCTGCGGGTGCTGGACCAGCTGGGCCTGTACGCGGAGCTGCTGCGGACGTCGCAGAAGATGGGCCGG
CTGCAGATCTGGCGCAACGAGCGGCAGTGGAACACGGTCAGCTTCGCCGGCGTCGAGCCGGCGTACGGCTACCCG
GTGCTGTCGACGGAGCGGCACGCCTTCCACCGGCTGCTGTACGCCGCGGCCGGGGCCGAGGAGCGCGTCGTGCTG
GGCGCCAAGGTCGTCGACGTCGTCGACGAGCCGGGCGCCGGGCCGGCCCGCGTCGTCGTCGAGGGCGGCCGTGAG
TACCGCGGCCGCATCGTCGTCGGCGCCGACGGCATCCGCTCCGCCGTCCGCCGCGCCCTGCAGCGCAAGAACGGG
CTCGAGGCCGCCGCCAACACCATCCGCTTCACCGGCCGCGTCCACTTCTCCGGCTACACCCGCCCGCTCGACCAC
TGCGGGCCCGCCGAGGTCGGCGTCGGCAACTGGATGCTCTACGACCGCACCATCCTGACCACCTGGCCGTGCCGC
GACAACAGGCAGTGGTACATCGGCGTCAAGATGGCCGAGGGCGACGTCGACAAGAACCGCTCCGTCTGGGGCTCC
ATCACACCCGACGACATCAAGAAGGTGTATGGCAAAGCCTTCCATCCGTTTGCGGAGGATAAACAGTTCGGATCC
ATCGTCGACAAATCAGAGCGTGTCATCGCCAGCAACGTCTTCCAGGAAGTCGACTTCCCGTCCATGTACGACGGC
AGAGTGGCGCTCCTCGGCGACGCCGCACATAGCATGACGAGCTTCTTCGGGCAAGGCGGATGTCAGGCCATCGAG
GACGCGGCCGTGCTGGGCAACCTGCTGGCCGAGAACCGGTCGTCGCTGGACCGGCCGCACGAGCTGCTCGCGCTC
TACGCCAAGACGCGCGAGCCGCGAACGCAGGACCTGTCGCGCTTCAGCGACCGGTTCGCGATGCTGCACACGGCG
CGGCTGCCCTACGGGCTGGGGCCCTTCGTCCGTTGGCTGCTCTACACCCTGGTGCCCTCGTGGTTCTGGGTCTGG
TACCTGGGCTGGCTCTACGGCTACCAGCCCCGGGTCACGGCCCTGGACAAGCCGTCCATCTACGGACGCGACAAG
GCCTGA
Transcript >Hirsu2|10729
ATGACGACGGTCGACGCGGACATCATCATCGTCGGCGCGGGCATCGGCGGCCTCGCGCTGGCGGCCATCTGCCGG
CAGCTGGGCATCTCGTACACGGTGCTGGAGCGGGCGGCGACGCTGCAGCCGGTGGGCGCGGGCATCTCGCTGGCG
CCCAACGCGCTGCGGGTGCTGGACCAGCTGGGCCTGTACGCGGAGCTGCTGCGGACGTCGCAGAAGATGGGCCGG
CTGCAGATCTGGCGCAACGAGCGGCAGTGGAACACGGTCAGCTTCGCCGGCGTCGAGCCGGCGTACGGCTACCCG
GTGCTGTCGACGGAGCGGCACGCCTTCCACCGGCTGCTGTACGCCGCGGCCGGGGCCGAGGAGCGCGTCGTGCTG
GGCGCCAAGGTCGTCGACGTCGTCGACGAGCCGGGCGCCGGGCCGGCCCGCGTCGTCGTCGAGGGCGGCCGTGAG
TACCGCGGCCGCATCGTCGTCGGCGCCGACGGCATCCGCTCCGCCGTCCGCCGCGCCCTGCAGCGCAAGAACGGG
CTCGAGGCCGCCGCCAACACCATCCGCTTCACCGGCCGCGTCCACTTCTCCGGCTACACCCGCCCGCTCGACCAC
TGCGGGCCCGCCGAGGTCGGCGTCGGCAACTGGATGCTCTACGACCGCACCATCCTGACCACCTGGCCGTGCCGC
GACAACAGGCAGTGGTACATCGGCGTCAAGATGGCCGAGGGCGACGTCGACAAGAACCGCTCCGTCTGGGGCTCC
ATCACACCCGACGACATCAAGAAGGTGTATGGCAAAGCCTTCCATCCGTTTGCGGAGGATAAACAGTTCGGATCC
ATCGTCGACAAATCAGAGCGTGTCATCGCCAGCAACGTCTTCCAGGAAGTCGACTTCCCGTCCATGTACGACGGC
AGAGTGGCGCTCCTCGGCGACGCCGCACATAGCATGACGAGCTTCTTCGGGCAAGGCGGATGTCAGGCCATCGAG
GACGCGGCCGTGCTGGGCAACCTGCTGGCCGAGAACCGGTCGTCGCTGGACCGGCCGCACGAGCTGCTCGCGCTC
TACGCCAAGACGCGCGAGCCGCGAACGCAGGACCTGTCGCGCTTCAGCGACCGGTTCGCGATGCTGCACACGGCG
CGGCTGCCCTACGGGCTGGGGCCCTTCGTCCGTTGGCTGCTCTACACCCTGGTGCCCTCGTGGTTCTGGGTCTGG
TACCTGGGCTGGCTCTACGGCTACCAGCCCCGGGTCACGGCCCTGGACAAGCCGTCCATCTACGGACGCGACAAG
GCCTGA
Gene >Hirsu2|10729
ATGACGACGGTCGACGCGGACATCATCATCGTCGGCGCGGGCATCGGCGGCCTCGCGCTGGCGGCCATCTGCCGG
CAGCTGGGCATCTCGTACACGGTGCTGGAGCGGGCGGCGACGCTGCAGCCGGTGGGCGCGGGCATCTCGCTGGCG
CCCAACGCGCTGCGGGTGCTGGACCAGCTGGGCCTGTACGCGGAGCTGCTGCGGACGTCGCAGAAGATGGGCCGG
CTGCAGATCTGGCGCAACGAGCGGCAGTGGAACACGGTCAGCTTCGCCGGCGTCGAGCCGGCGTACGGCTACCCG
GTGCTGTCGACGGAGCGGCACGCCTTCCACCGGCTGCTGTACGCCGCGGCCGGGGCCGAGGAGCGCGTCGTGCTG
GGCGCCAAGGTCGTCGACGTCGTCGACGAGCCGGGCGCCGGGCCGGCCCGCGTCGTCGTCGAGGGCGGCCGTGAG
TACCGCGGCCGCATCGTCGTCGGCGCCGACGGCATCCGCTCCGCCGTCCGCCGCGCCCTGCAGCGCAAGAACGGG
CTCGAGGCCGCCGCCAACACCATCCGCTTCACCGGCCGCGTCCACTTCTCCGGCTACACCCGCCCGCTCGACCAC
TGCGGGCCCGCCGAGGTCGGCGTCGGCAACTGGATGCTCTACGACCGCACCATCCTGACCACCTGGCCGTGCCGC
GACAACAGGCAGTGGTACATCGGCGTCAAGGTATGTGAGCGTGAGGGGGTCTCGCAAGGCTGGAAGGGGGGCCCT
CATGATGGAAGACGAGTGAGATGAATCAGACTTACACACACTCACTCACACTCACACATACACACACACACACAC
ACACGAGAGAGAGAGACATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAAAGGCTAACACACGGCAATCG
TGGCAGATGGCCGAGGGCGACGTCGACAAGAACCGCTCCGTCTGGGGCTCCATCACACCCGACGACATCAAGAAG
GTGTATGGCAAAGCCTTCCATCCGTTTGCGGAGGATAAACAGTTCGGATCCAGTAAGCAGGCTGCGCTCCGCGCG
TCTCATCCTATCTCGTCCTCCCCCTCCGGGGCGGCCGTCATACCCGCCGGCTAACGGGAAGGGCAGTCGTCGACA
AATCAGAGCGTGTCATCGCCAGCAACGTCTTCCAGGAAGTCGACTTCCCGTCCATGTACGACGGCAGAGTGGCGC
TCCTCGGCGACGGTCAGTAGCAGACACATCAATCCCCCCTCTCCATCCTCCTCCTCCCTGCTGCCCGGCCCATTG
AAGGGCCAAAGGGGCCGCGAACGGGGTGACGACGTACTGACGCGGACAAACACTCGCCGGTGCAACAGCCGCACA
TAGCATGACGAGCTTCTTCGGGCAGTAAGTCAGCAGCACTCATCGTTGGGTGTCCCTCGCGGACGGCAGCTAACG
GGCATCTCTCTTCTTTTCTCCCCCCTGTTGCGCGGTAAACAGAGGCGGATGTCAGGCCATCGAGGACGCGGCCGT
GCTGGGCAACCTGCTGGCCGAGAACCGGTCGTCGCTGGACCGGCCGCACGAGCTGCTCGCGCTCTACGCCAAGAC
GCGCGAGCCGCGAACGCAGGACCTGTCGCGCTTCAGCGACCGGTTCGCGATGCTGCACACGGCGCGGCTGCCCTA
CGGGCTGGGGCCCTTCGTCCGTTGGCTGCTCTACACCCTGGTGCCCTCGTGGTTCTGGGTCTGGTACCTGGGCTG
GCTCTACGGCTACCAGCCCCGGGTCACGGCCCTGGACAAGCCGTCCATCTACGGACGCGACAAGGCCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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