© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10729 |
| Gene name | |
| Location | Contig_898:7026..8821 |
| Strand | + |
| Gene length (bp) | 1795 |
| Transcript length (bp) | 1281 |
| Coding sequence length (bp) | 1281 |
| Protein length (aa) | 427 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01494 | FAD_binding_3 | FAD binding domain | 3.8E-26 | 6 | 365 |
| PF05834 | Lycopene_cycl | Lycopene cyclase protein | 5.7E-06 | 7 | 182 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9F131|3HBH1_PSEAC | 3-hydroxybenzoate 6-hydroxylase 1 OS=Pseudomonas alcaligenes GN=xlnD PE=1 SV=1 | 7 | 409 | 4.0E-24 |
| sp|Q02N79|PQSH_PSEAB | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pqsH PE=1 SV=1 | 8 | 393 | 8.0E-23 |
| sp|Q9I0Q0|PQSH_PSEAE | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=pqsH PE=3 SV=1 | 8 | 393 | 9.0E-23 |
| sp|Q53552|NHG2_PSEPU | Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=4 SV=1 | 8 | 400 | 2.0E-21 |
| sp|P23262|NHG1_PSEPU | Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=1 SV=4 | 23 | 400 | 1.0E-20 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9F131|3HBH1_PSEAC | 3-hydroxybenzoate 6-hydroxylase 1 OS=Pseudomonas alcaligenes GN=xlnD PE=1 SV=1 | 7 | 409 | 4.0E-24 |
| sp|Q02N79|PQSH_PSEAB | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pqsH PE=1 SV=1 | 8 | 393 | 8.0E-23 |
| sp|Q9I0Q0|PQSH_PSEAE | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=pqsH PE=3 SV=1 | 8 | 393 | 9.0E-23 |
| sp|Q53552|NHG2_PSEPU | Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=4 SV=1 | 8 | 400 | 2.0E-21 |
| sp|P23262|NHG1_PSEPU | Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=1 SV=4 | 23 | 400 | 1.0E-20 |
| sp|P86491|6HN3M_PSEFL | 6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas fluorescens PE=1 SV=1 | 26 | 378 | 1.0E-17 |
| sp|Q88FY2|6HN3M_PSEPK | 6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas putida (strain KT2440) GN=nicC PE=1 SV=1 | 8 | 378 | 3.0E-17 |
| sp|B6D1N4|HPXO_KLEPN | FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae GN=hpxO PE=3 SV=1 | 9 | 362 | 1.0E-16 |
| sp|A6T923|HPXO_KLEP7 | FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hpxO PE=1 SV=1 | 9 | 362 | 2.0E-16 |
| sp|O81360|ABA2_PRUAR | Zeaxanthin epoxidase, chloroplastic OS=Prunus armeniaca PE=2 SV=1 | 8 | 384 | 5.0E-16 |
| sp|Q5EXK1|3HBH_KLEOX | 3-hydroxybenzoate 6-hydroxylase OS=Klebsiella oxytoca GN=mhbM PE=1 SV=1 | 22 | 409 | 7.0E-16 |
| sp|C3VEQ2|ZEP_ONCHC | Zeaxanthin epoxidase, chloroplastic OS=Oncidium hybrid cultivar GN=ZEP PE=2 SV=1 | 88 | 384 | 2.0E-15 |
| sp|P93236|ABA2_SOLLC | Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1 | 8 | 384 | 2.0E-15 |
| sp|Q3S4B7|3HBH_POLNA | 3-hydroxybenzoate 6-hydroxylase OS=Polaromonas naphthalenivorans (strain CJ2) GN=nagX PE=1 SV=1 | 28 | 409 | 3.0E-15 |
| sp|Q0JCU7|ZEP_ORYSJ | Zeaxanthin epoxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=ZEP PE=2 SV=1 | 8 | 384 | 7.0E-15 |
| sp|Q40412|ABA2_NICPL | Zeaxanthin epoxidase, chloroplastic OS=Nicotiana plumbaginifolia GN=ABA2 PE=1 SV=1 | 8 | 384 | 2.0E-14 |
| sp|Q96375|ABA2_CAPAN | Zeaxanthin epoxidase, chloroplastic OS=Capsicum annuum PE=2 SV=1 | 8 | 384 | 1.0E-13 |
| sp|Q9FGC7|ZEP_ARATH | Zeaxanthin epoxidase, chloroplastic OS=Arabidopsis thaliana GN=ZEP PE=1 SV=1 | 8 | 336 | 4.0E-12 |
| sp|B5B0J6|HPXO_KLEOX | FAD-dependent urate hydroxylase OS=Klebsiella oxytoca GN=hpxO PE=3 SV=1 | 18 | 362 | 3.0E-11 |
| sp|A4XD40|KMO_SALTO | Kynurenine 3-monooxygenase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=kmo PE=3 SV=1 | 12 | 405 | 8.0E-11 |
| sp|Q0QFQ1|3HBH2_PSEAC | 3-hydroxybenzoate 6-hydroxylase 2 OS=Pseudomonas alcaligenes GN=hbzD PE=2 SV=1 | 103 | 408 | 2.0E-10 |
| sp|Q476N1|MHPA_CUPPJ | 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=mhpA PE=3 SV=1 | 1 | 335 | 6.0E-10 |
| sp|A8LVF4|KMO_SALAI | Kynurenine 3-monooxygenase OS=Salinispora arenicola (strain CNS-205) GN=kmo PE=3 SV=1 | 12 | 417 | 2.0E-08 |
| sp|A4JPY1|MHPA1_BURVG | 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase 1 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mhpA1 PE=3 SV=1 | 3 | 367 | 6.0E-08 |
| sp|O06489|YETM_BACSU | Putative oxidoreductase YetM OS=Bacillus subtilis (strain 168) GN=yetM PE=3 SV=1 | 25 | 366 | 2.0E-07 |
| sp|A1TCX2|MHPA_MYCVP | 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=mhpA PE=3 SV=1 | 12 | 396 | 2.0E-07 |
| sp|Q93NG3|DHPH_ARTNI | 2,6-dihydroxypyridine 3-monooxygenase OS=Arthrobacter nicotinovorans GN=dhpH PE=1 SV=1 | 1 | 338 | 3.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0071949 | FAD binding | Yes |
| GO:0036094 | small molecule binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0043168 | anion binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0050660 | flavin adenine dinucleotide binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 386 | 408 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10729 MTTVDADIIIVGAGIGGLALAAICRQLGISYTVLERAATLQPVGAGISLAPNALRVLDQLGLYAELLRTSQKMGR LQIWRNERQWNTVSFAGVEPAYGYPVLSTERHAFHRLLYAAAGAEERVVLGAKVVDVVDEPGAGPARVVVEGGRE YRGRIVVGADGIRSAVRRALQRKNGLEAAANTIRFTGRVHFSGYTRPLDHCGPAEVGVGNWMLYDRTILTTWPCR DNRQWYIGVKMAEGDVDKNRSVWGSITPDDIKKVYGKAFHPFAEDKQFGSIVDKSERVIASNVFQEVDFPSMYDG RVALLGDAAHSMTSFFGQGGCQAIEDAAVLGNLLAENRSSLDRPHELLALYAKTREPRTQDLSRFSDRFAMLHTA RLPYGLGPFVRWLLYTLVPSWFWVWYLGWLYGYQPRVTALDKPSIYGRDKA* |
| Coding | >Hirsu2|10729 ATGACGACGGTCGACGCGGACATCATCATCGTCGGCGCGGGCATCGGCGGCCTCGCGCTGGCGGCCATCTGCCGG CAGCTGGGCATCTCGTACACGGTGCTGGAGCGGGCGGCGACGCTGCAGCCGGTGGGCGCGGGCATCTCGCTGGCG CCCAACGCGCTGCGGGTGCTGGACCAGCTGGGCCTGTACGCGGAGCTGCTGCGGACGTCGCAGAAGATGGGCCGG CTGCAGATCTGGCGCAACGAGCGGCAGTGGAACACGGTCAGCTTCGCCGGCGTCGAGCCGGCGTACGGCTACCCG GTGCTGTCGACGGAGCGGCACGCCTTCCACCGGCTGCTGTACGCCGCGGCCGGGGCCGAGGAGCGCGTCGTGCTG GGCGCCAAGGTCGTCGACGTCGTCGACGAGCCGGGCGCCGGGCCGGCCCGCGTCGTCGTCGAGGGCGGCCGTGAG TACCGCGGCCGCATCGTCGTCGGCGCCGACGGCATCCGCTCCGCCGTCCGCCGCGCCCTGCAGCGCAAGAACGGG CTCGAGGCCGCCGCCAACACCATCCGCTTCACCGGCCGCGTCCACTTCTCCGGCTACACCCGCCCGCTCGACCAC TGCGGGCCCGCCGAGGTCGGCGTCGGCAACTGGATGCTCTACGACCGCACCATCCTGACCACCTGGCCGTGCCGC GACAACAGGCAGTGGTACATCGGCGTCAAGATGGCCGAGGGCGACGTCGACAAGAACCGCTCCGTCTGGGGCTCC ATCACACCCGACGACATCAAGAAGGTGTATGGCAAAGCCTTCCATCCGTTTGCGGAGGATAAACAGTTCGGATCC ATCGTCGACAAATCAGAGCGTGTCATCGCCAGCAACGTCTTCCAGGAAGTCGACTTCCCGTCCATGTACGACGGC AGAGTGGCGCTCCTCGGCGACGCCGCACATAGCATGACGAGCTTCTTCGGGCAAGGCGGATGTCAGGCCATCGAG GACGCGGCCGTGCTGGGCAACCTGCTGGCCGAGAACCGGTCGTCGCTGGACCGGCCGCACGAGCTGCTCGCGCTC TACGCCAAGACGCGCGAGCCGCGAACGCAGGACCTGTCGCGCTTCAGCGACCGGTTCGCGATGCTGCACACGGCG CGGCTGCCCTACGGGCTGGGGCCCTTCGTCCGTTGGCTGCTCTACACCCTGGTGCCCTCGTGGTTCTGGGTCTGG TACCTGGGCTGGCTCTACGGCTACCAGCCCCGGGTCACGGCCCTGGACAAGCCGTCCATCTACGGACGCGACAAG GCCTGA |
| Transcript | >Hirsu2|10729 ATGACGACGGTCGACGCGGACATCATCATCGTCGGCGCGGGCATCGGCGGCCTCGCGCTGGCGGCCATCTGCCGG CAGCTGGGCATCTCGTACACGGTGCTGGAGCGGGCGGCGACGCTGCAGCCGGTGGGCGCGGGCATCTCGCTGGCG CCCAACGCGCTGCGGGTGCTGGACCAGCTGGGCCTGTACGCGGAGCTGCTGCGGACGTCGCAGAAGATGGGCCGG CTGCAGATCTGGCGCAACGAGCGGCAGTGGAACACGGTCAGCTTCGCCGGCGTCGAGCCGGCGTACGGCTACCCG GTGCTGTCGACGGAGCGGCACGCCTTCCACCGGCTGCTGTACGCCGCGGCCGGGGCCGAGGAGCGCGTCGTGCTG GGCGCCAAGGTCGTCGACGTCGTCGACGAGCCGGGCGCCGGGCCGGCCCGCGTCGTCGTCGAGGGCGGCCGTGAG TACCGCGGCCGCATCGTCGTCGGCGCCGACGGCATCCGCTCCGCCGTCCGCCGCGCCCTGCAGCGCAAGAACGGG CTCGAGGCCGCCGCCAACACCATCCGCTTCACCGGCCGCGTCCACTTCTCCGGCTACACCCGCCCGCTCGACCAC TGCGGGCCCGCCGAGGTCGGCGTCGGCAACTGGATGCTCTACGACCGCACCATCCTGACCACCTGGCCGTGCCGC GACAACAGGCAGTGGTACATCGGCGTCAAGATGGCCGAGGGCGACGTCGACAAGAACCGCTCCGTCTGGGGCTCC ATCACACCCGACGACATCAAGAAGGTGTATGGCAAAGCCTTCCATCCGTTTGCGGAGGATAAACAGTTCGGATCC ATCGTCGACAAATCAGAGCGTGTCATCGCCAGCAACGTCTTCCAGGAAGTCGACTTCCCGTCCATGTACGACGGC AGAGTGGCGCTCCTCGGCGACGCCGCACATAGCATGACGAGCTTCTTCGGGCAAGGCGGATGTCAGGCCATCGAG GACGCGGCCGTGCTGGGCAACCTGCTGGCCGAGAACCGGTCGTCGCTGGACCGGCCGCACGAGCTGCTCGCGCTC TACGCCAAGACGCGCGAGCCGCGAACGCAGGACCTGTCGCGCTTCAGCGACCGGTTCGCGATGCTGCACACGGCG CGGCTGCCCTACGGGCTGGGGCCCTTCGTCCGTTGGCTGCTCTACACCCTGGTGCCCTCGTGGTTCTGGGTCTGG TACCTGGGCTGGCTCTACGGCTACCAGCCCCGGGTCACGGCCCTGGACAAGCCGTCCATCTACGGACGCGACAAG GCCTGA |
| Gene | >Hirsu2|10729 ATGACGACGGTCGACGCGGACATCATCATCGTCGGCGCGGGCATCGGCGGCCTCGCGCTGGCGGCCATCTGCCGG CAGCTGGGCATCTCGTACACGGTGCTGGAGCGGGCGGCGACGCTGCAGCCGGTGGGCGCGGGCATCTCGCTGGCG CCCAACGCGCTGCGGGTGCTGGACCAGCTGGGCCTGTACGCGGAGCTGCTGCGGACGTCGCAGAAGATGGGCCGG CTGCAGATCTGGCGCAACGAGCGGCAGTGGAACACGGTCAGCTTCGCCGGCGTCGAGCCGGCGTACGGCTACCCG GTGCTGTCGACGGAGCGGCACGCCTTCCACCGGCTGCTGTACGCCGCGGCCGGGGCCGAGGAGCGCGTCGTGCTG GGCGCCAAGGTCGTCGACGTCGTCGACGAGCCGGGCGCCGGGCCGGCCCGCGTCGTCGTCGAGGGCGGCCGTGAG TACCGCGGCCGCATCGTCGTCGGCGCCGACGGCATCCGCTCCGCCGTCCGCCGCGCCCTGCAGCGCAAGAACGGG CTCGAGGCCGCCGCCAACACCATCCGCTTCACCGGCCGCGTCCACTTCTCCGGCTACACCCGCCCGCTCGACCAC TGCGGGCCCGCCGAGGTCGGCGTCGGCAACTGGATGCTCTACGACCGCACCATCCTGACCACCTGGCCGTGCCGC GACAACAGGCAGTGGTACATCGGCGTCAAGGTATGTGAGCGTGAGGGGGTCTCGCAAGGCTGGAAGGGGGGCCCT CATGATGGAAGACGAGTGAGATGAATCAGACTTACACACACTCACTCACACTCACACATACACACACACACACAC ACACGAGAGAGAGAGACATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAAAGGCTAACACACGGCAATCG TGGCAGATGGCCGAGGGCGACGTCGACAAGAACCGCTCCGTCTGGGGCTCCATCACACCCGACGACATCAAGAAG GTGTATGGCAAAGCCTTCCATCCGTTTGCGGAGGATAAACAGTTCGGATCCAGTAAGCAGGCTGCGCTCCGCGCG TCTCATCCTATCTCGTCCTCCCCCTCCGGGGCGGCCGTCATACCCGCCGGCTAACGGGAAGGGCAGTCGTCGACA AATCAGAGCGTGTCATCGCCAGCAACGTCTTCCAGGAAGTCGACTTCCCGTCCATGTACGACGGCAGAGTGGCGC TCCTCGGCGACGGTCAGTAGCAGACACATCAATCCCCCCTCTCCATCCTCCTCCTCCCTGCTGCCCGGCCCATTG AAGGGCCAAAGGGGCCGCGAACGGGGTGACGACGTACTGACGCGGACAAACACTCGCCGGTGCAACAGCCGCACA TAGCATGACGAGCTTCTTCGGGCAGTAAGTCAGCAGCACTCATCGTTGGGTGTCCCTCGCGGACGGCAGCTAACG GGCATCTCTCTTCTTTTCTCCCCCCTGTTGCGCGGTAAACAGAGGCGGATGTCAGGCCATCGAGGACGCGGCCGT GCTGGGCAACCTGCTGGCCGAGAACCGGTCGTCGCTGGACCGGCCGCACGAGCTGCTCGCGCTCTACGCCAAGAC GCGCGAGCCGCGAACGCAGGACCTGTCGCGCTTCAGCGACCGGTTCGCGATGCTGCACACGGCGCGGCTGCCCTA CGGGCTGGGGCCCTTCGTCCGTTGGCTGCTCTACACCCTGGTGCCCTCGTGGTTCTGGGTCTGGTACCTGGGCTG GCTCTACGGCTACCAGCCCCGGGTCACGGCCCTGGACAAGCCGTCCATCTACGGACGCGACAAGGCCTGA |