Protein ID | Hirsu2|10721 |
Gene name | |
Location | Contig_896:10758..11055 |
Strand | - |
Gene length (bp) | 297 |
Transcript length (bp) | 297 |
Coding sequence length (bp) | 297 |
Protein length (aa) | 99 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion|Endoplasmic reticulum|Lysosome/Vacuole | Signal peptide|Mitochondrial transit peptide | 0.2474 | 0.3165 | 0.2051 | 0.1713 | 0.6394 | 0.1665 | 0.6422 | 0.647 | 0.5641 | 0.3029 |
Orthofinder run ID | 4 |
Orthogroup | 263 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10721 LPPPRASPKGLLRALRHVLVVLSLHACLACRWERDLWLEANGRTRVLLLRHLRHDVGWWPVPGVDRAVFWDEAAL VSASVAAQMLDVWAPWAWGRLGW* |
Coding | >Hirsu2|10721 CTGCCGCCGCCGCGCGCTTCGCCCAAGGGCCTGCTCCGCGCGCTGCGCCACGTCCTCGTCGTTCTCTCCCTCCAC GCCTGCCTCGCCTGCCGCTGGGAGCGCGACCTGTGGCTCGAGGCGAACGGCCGGACGCGCGTGCTGCTGCTGCGG CACCTGCGCCACGACGTCGGCTGGTGGCCCGTCCCTGGCGTCGACCGCGCCGTCTTCTGGGACGAGGCTGCCCTT GTCTCGGCTTCTGTCGCGGCCCAGATGCTGGATGTCTGGGCGCCCTGGGCTTGGGGCCGTCTTGGCTGGTGA |
Transcript | >Hirsu2|10721 CTGCCGCCGCCGCGCGCTTCGCCCAAGGGCCTGCTCCGCGCGCTGCGCCACGTCCTCGTCGTTCTCTCCCTCCAC GCCTGCCTCGCCTGCCGCTGGGAGCGCGACCTGTGGCTCGAGGCGAACGGCCGGACGCGCGTGCTGCTGCTGCGG CACCTGCGCCACGACGTCGGCTGGTGGCCCGTCCCTGGCGTCGACCGCGCCGTCTTCTGGGACGAGGCTGCCCTT GTCTCGGCTTCTGTCGCGGCCCAGATGCTGGATGTCTGGGCGCCCTGGGCTTGGGGCCGTCTTGGCTGGTGA |
Gene | >Hirsu2|10721 CTGCCGCCGCCGCGCGCTTCGCCCAAGGGCCTGCTCCGCGCGCTGCGCCACGTCCTCGTCGTTCTCTCCCTCCAC GCCTGCCTCGCCTGCCGCTGGGAGCGCGACCTGTGGCTCGAGGCGAACGGCCGGACGCGCGTGCTGCTGCTGCGG CACCTGCGCCACGACGTCGGCTGGTGGCCCGTCCCTGGCGTCGACCGCGCCGTCTTCTGGGACGAGGCTGCCCTT GTCTCGGCTTCTGTCGCGGCCCAGATGCTGGATGTCTGGGCGCCCTGGGCTTGGGGCCGTCTTGGCTGGTGA |