Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10719
Gene name
LocationContig_896:4492..5394
Strand-
Gene length (bp)902
Transcript length (bp)825
Coding sequence length (bp)825
Protein length (aa) 275

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14234 DUF4336 Domain of unknown function (DUF4336) 6.5E-10 38 181

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 64 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10719
MSAELIPANPQDLMVIRNVTPKIATFSVPFSRFGKIRIGGRGTLVKLSSGALAIFSPVALTEATKAKVTEMGGRV
DYIVALDIEHHIFISEWAKQYPTAKLVGPGGIEEKRAKQQSDPKIGADKFDVVFTKDNKRQLRIGDEFDADFEYE
YVDGHTNLELVFFHKPDRVLIEADLMFNLPAVEQYSRAPEEDRKAAGIADTLFQGVQSTEGEPKWMRRFNWYLAA
KDRPSLNASIKLIDAWDFATLIPCHGDVLEGDGKEVFRKVFKWHLEADK*
Coding >Hirsu2|10719
ATGTCGGCCGAACTGATCCCCGCGAACCCCCAGGACCTGATGGTCATTCGGAATGTCACGCCCAAGATTGCCACC
TTCTCCGTGCCCTTCTCCCGCTTCGGCAAGATCCGGATTGGCGGCCGCGGAACGTTGGTCAAGCTCAGCTCGGGG
GCCCTGGCCATCTTCTCGCCCGTGGCCCTGACCGAGGCCACCAAGGCCAAGGTGACTGAGATGGGCGGCCGCGTC
GACTACATCGTCGCCCTCGACATCGAGCACCACATCTTCATCTCCGAGTGGGCCAAGCAGTACCCGACGGCCAAG
CTCGTCGGCCCCGGCGGCATCGAGGAGAAGCGGGCCAAGCAGCAGAGCGACCCCAAGATCGGCGCCGACAAGTTC
GACGTTGTCTTCACCAAGGACAACAAGCGCCAGCTGCGCATCGGCGACGAGTTCGACGCCGACTTCGAGTACGAG
TACGTCGACGGCCACACCAACCTCGAGCTCGTCTTCTTCCACAAGCCCGACCGCGTCCTCATCGAGGCCGACCTC
ATGTTCAACCTGCCGGCCGTCGAGCAGTACAGCAGGGCGCCCGAGGAGGACCGCAAGGCGGCCGGCATCGCCGAC
ACGCTCTTCCAGGGCGTCCAAAGCACCGAGGGCGAGCCCAAGTGGATGCGCCGCTTCAACTGGTACCTGGCCGCC
AAGGACCGGCCCAGCCTCAACGCCAGCATCAAGCTGATCGACGCCTGGGACTTTGCCACGCTCATCCCCTGCCAC
GGCGACGTGCTCGAGGGCGACGGCAAGGAAGTCTTCCGAAAGGTCTTCAAATGGCATCTGGAGGCAGACAAGTGA
Transcript >Hirsu2|10719
ATGTCGGCCGAACTGATCCCCGCGAACCCCCAGGACCTGATGGTCATTCGGAATGTCACGCCCAAGATTGCCACC
TTCTCCGTGCCCTTCTCCCGCTTCGGCAAGATCCGGATTGGCGGCCGCGGAACGTTGGTCAAGCTCAGCTCGGGG
GCCCTGGCCATCTTCTCGCCCGTGGCCCTGACCGAGGCCACCAAGGCCAAGGTGACTGAGATGGGCGGCCGCGTC
GACTACATCGTCGCCCTCGACATCGAGCACCACATCTTCATCTCCGAGTGGGCCAAGCAGTACCCGACGGCCAAG
CTCGTCGGCCCCGGCGGCATCGAGGAGAAGCGGGCCAAGCAGCAGAGCGACCCCAAGATCGGCGCCGACAAGTTC
GACGTTGTCTTCACCAAGGACAACAAGCGCCAGCTGCGCATCGGCGACGAGTTCGACGCCGACTTCGAGTACGAG
TACGTCGACGGCCACACCAACCTCGAGCTCGTCTTCTTCCACAAGCCCGACCGCGTCCTCATCGAGGCCGACCTC
ATGTTCAACCTGCCGGCCGTCGAGCAGTACAGCAGGGCGCCCGAGGAGGACCGCAAGGCGGCCGGCATCGCCGAC
ACGCTCTTCCAGGGCGTCCAAAGCACCGAGGGCGAGCCCAAGTGGATGCGCCGCTTCAACTGGTACCTGGCCGCC
AAGGACCGGCCCAGCCTCAACGCCAGCATCAAGCTGATCGACGCCTGGGACTTTGCCACGCTCATCCCCTGCCAC
GGCGACGTGCTCGAGGGCGACGGCAAGGAAGTCTTCCGAAAGGTCTTCAAATGGCATCTGGAGGCAGACAAGTGA
Gene >Hirsu2|10719
ATGTCGGCCGAACTGATCCCCGCGAACCCCCAGGACCTGATGGTCATTCGGAATGTCACGCCCAAGATTGCCACC
TTCTCCGTGCCCTTCTCCCGCTTCGGCAAGATCCGGATTGGCGGCCGCGGAACGTTGGGTAGGTCGGCTGCGTTG
CGCCAGAGCTCCGCTGGCTCGCCTGGGCTGACCGGCTTGGGGGGCGACGGCGCGTGTTAGTCAAGCTCAGCTCGG
GGGCCCTGGCCATCTTCTCGCCCGTGGCCCTGACCGAGGCCACCAAGGCCAAGGTGACTGAGATGGGCGGCCGCG
TCGACTACATCGTCGCCCTCGACATCGAGCACCACATCTTCATCTCCGAGTGGGCCAAGCAGTACCCGACGGCCA
AGCTCGTCGGCCCCGGCGGCATCGAGGAGAAGCGGGCCAAGCAGCAGAGCGACCCCAAGATCGGCGCCGACAAGT
TCGACGTTGTCTTCACCAAGGACAACAAGCGCCAGCTGCGCATCGGCGACGAGTTCGACGCCGACTTCGAGTACG
AGTACGTCGACGGCCACACCAACCTCGAGCTCGTCTTCTTCCACAAGCCCGACCGCGTCCTCATCGAGGCCGACC
TCATGTTCAACCTGCCGGCCGTCGAGCAGTACAGCAGGGCGCCCGAGGAGGACCGCAAGGCGGCCGGCATCGCCG
ACACGCTCTTCCAGGGCGTCCAAAGCACCGAGGGCGAGCCCAAGTGGATGCGCCGCTTCAACTGGTACCTGGCCG
CCAAGGACCGGCCCAGCCTCAACGCCAGCATCAAGCTGATCGACGCCTGGGACTTTGCCACGCTCATCCCCTGCC
ACGGCGACGTGCTCGAGGGCGACGGCAAGGAAGTCTTCCGAAAGGTCTTCAAATGGCATCTGGAGGCAGACAAGT
GA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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