© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10707 |
| Gene name | |
| Location | Contig_893:8716..9331 |
| Strand | + |
| Gene length (bp) | 615 |
| Transcript length (bp) | 516 |
| Coding sequence length (bp) | 516 |
| Protein length (aa) | 172 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12273 | RCR | Chitin synthesis regulation, resistance to Congo red | 3.7E-24 | 34 | 169 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q03446|RCR2_YEAST | Protein RCR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RCR2 PE=1 SV=1 | 32 | 75 | 2.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 33 | 55 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10707 MAPTSVVKLMARYVECDITGRCYRRNSRWYDWGRWILIGILLLGLLLVLFSLSCIARRRRRRGAQPLYGTGWMAP AGKFGGHNSQQPMNTYQQGYDGQGYGPQGGYPPAPPAYGQPQHAQYTGTTGTTFNPNDGYYGDPAQQQQHYGVQQ PPNAYQPNSPYSPPAGPPPGK* |
| Coding | >Hirsu2|10707 ATGGCGCCCACGTCGGTAGTCAAGCTGATGGCGCGCTACGTTGAGTGCGACATCACCGGTCGCTGCTACAGACGG AACAGCCGCTGGTACGACTGGGGTCGATGGATCTTGATCGGCATCCTCCTGCTGGGCCTCCTCCTCGTCCTGTTC TCGTTGTCATGCATCGCCCGTCGCCGCCGTCGCCGCGGTGCGCAGCCGCTGTACGGCACTGGCTGGATGGCGCCG GCCGGCAAGTTCGGCGGCCACAACTCGCAGCAGCCCATGAACACGTACCAGCAGGGCTACGACGGCCAGGGCTAC GGCCCGCAGGGTGGCTACCCCCCGGCGCCGCCGGCGTACGGCCAGCCGCAGCACGCGCAGTACACGGGCACGACG GGCACGACCTTCAACCCCAACGACGGCTACTACGGCGACCCGGCGCAGCAGCAGCAGCACTACGGCGTCCAGCAG CCGCCCAACGCCTACCAGCCGAATTCCCCCTACTCGCCTCCCGCCGGCCCGCCGCCCGGCAAGTAG |
| Transcript | >Hirsu2|10707 ATGGCGCCCACGTCGGTAGTCAAGCTGATGGCGCGCTACGTTGAGTGCGACATCACCGGTCGCTGCTACAGACGG AACAGCCGCTGGTACGACTGGGGTCGATGGATCTTGATCGGCATCCTCCTGCTGGGCCTCCTCCTCGTCCTGTTC TCGTTGTCATGCATCGCCCGTCGCCGCCGTCGCCGCGGTGCGCAGCCGCTGTACGGCACTGGCTGGATGGCGCCG GCCGGCAAGTTCGGCGGCCACAACTCGCAGCAGCCCATGAACACGTACCAGCAGGGCTACGACGGCCAGGGCTAC GGCCCGCAGGGTGGCTACCCCCCGGCGCCGCCGGCGTACGGCCAGCCGCAGCACGCGCAGTACACGGGCACGACG GGCACGACCTTCAACCCCAACGACGGCTACTACGGCGACCCGGCGCAGCAGCAGCAGCACTACGGCGTCCAGCAG CCGCCCAACGCCTACCAGCCGAATTCCCCCTACTCGCCTCCCGCCGGCCCGCCGCCCGGCAAGTAG |
| Gene | >Hirsu2|10707 ATGGCGCCCACGTCGGTAGTCAAGCTGATGGCGCGCTACGTTGAGTGCGACATCACCGGTCGCTGCTACAGACGG AACAGCCGCTGGTACGACTGGGGTCGATGGATCTTGATCGGCATCCTCCTGCTGGGCCTCCTCCTCGTCCTGTTC TCGTTGTCGTGAGTTTGGCCCCCCCCCCTGTTCGTCCACTTGTCGCTCCCTTCCCCCTCTTCCGCTGCCCATGCC GGGAGCGCTGACGTGGGCTGTGACACGGCCAGATGCATCGCCCGTCGCCGCCGTCGCCGCGGTGCGCAGCCGCTG TACGGCACTGGCTGGATGGCGCCGGCCGGCAAGTTCGGCGGCCACAACTCGCAGCAGCCCATGAACACGTACCAG CAGGGCTACGACGGCCAGGGCTACGGCCCGCAGGGTGGCTACCCCCCGGCGCCGCCGGCGTACGGCCAGCCGCAG CACGCGCAGTACACGGGCACGACGGGCACGACCTTCAACCCCAACGACGGCTACTACGGCGACCCGGCGCAGCAG CAGCAGCACTACGGCGTCCAGCAGCCGCCCAACGCCTACCAGCCGAATTCCCCCTACTCGCCTCCCGCCGGCCCG CCGCCCGGCAAGTAG |