Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10705
Gene name
LocationContig_893:3023..4058
Strand-
Gene length (bp)1035
Transcript length (bp)1035
Coding sequence length (bp)1035
Protein length (aa) 345

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04488 Gly_transf_sug Glycosyltransferase sugar-binding region containing DXD motif 2.8E-06 138 172

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 36 0.5

Transmembrane Domains

Domain # Start End Length
1 12 29 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10705
MALRAAKRTWSGAVAAAALLTLLLYLMFARHPAAALERLRPSRWPAAEDGIPNQVHVVYVLREPTADVALEFGQA
LCVFAARHYWHPRRIYLHTDAGPEAVARARDGRAGKWSRLVLNLPEVRVRRVTAPTEANGVEIKQVEHRSDFVRV
QVVRELGGVYLDLDAHPLRDIRPLRRAGFGAVGGRQHGGQVNSGIFMARRGARFVSLWHDAMFRVFDGGWTTHSN
DLATRFGQQLVTEPGEMLILDQAALAPGSWLEPDCVDLYEAHDGGDDDDAPSWSHNYSDTYILHAFSPARGGYRI
NGFDHITPRYVLERRSNFARAVFPVAKLMLDRGLIDIDDSHLGS*
Coding >Hirsu2|10705
ATGGCGCTCAGGGCGGCGAAGCGAACGTGGTCCGGCGCTGTTGCGGCCGCGGCGCTCCTGACGCTCCTCCTATAT
CTGATGTTCGCGCGGCATCCGGCCGCGGCGCTCGAGCGGCTCCGGCCGTCCCGGTGGCCGGCGGCAGAGGACGGC
ATCCCGAACCAGGTGCACGTGGTGTACGTCCTGCGCGAGCCGACAGCCGACGTCGCCTTGGAGTTCGGCCAGGCG
CTGTGCGTCTTCGCGGCGCGGCACTACTGGCACCCGCGGCGCATCTACCTGCACACCGACGCCGGCCCCGAGGCG
GTGGCGCGGGCGCGCGACGGCCGGGCCGGCAAATGGAGCCGGCTCGTCCTCAACCTGCCCGAGGTGCGGGTCAGG
CGGGTGACGGCGCCGACGGAGGCCAACGGCGTGGAAATCAAACAGGTCGAGCACCGGTCCGACTTCGTGCGCGTG
CAGGTGGTGCGCGAGCTGGGCGGCGTCTACCTCGACTTGGACGCGCACCCGCTGCGGGACATCCGGCCGCTGCGG
CGGGCCGGCTTCGGCGCCGTCGGCGGCCGCCAGCACGGCGGGCAGGTCAACAGCGGCATCTTCATGGCGCGGCGC
GGCGCGCGCTTCGTGTCGCTGTGGCACGACGCCATGTTCCGCGTCTTCGACGGCGGCTGGACCACCCACAGCAAC
GACCTGGCCACCCGGTTCGGCCAGCAGCTCGTGACCGAGCCCGGCGAGATGCTCATCCTCGACCAGGCCGCCCTC
GCCCCGGGCAGCTGGCTGGAGCCGGACTGCGTCGACCTGTACGAGGCTCACGACGGCGGCGACGACGACGACGCG
CCCTCCTGGAGCCACAACTACTCCGACACGTACATCCTGCACGCCTTCAGCCCGGCCCGCGGCGGCTATCGCATC
AACGGCTTCGACCACATCACCCCGCGCTATGTGCTCGAGCGGAGGAGCAACTTTGCCCGCGCCGTCTTCCCCGTC
GCCAAGCTCATGCTCGACCGCGGCCTGATCGATATCGATGACTCCCACCTCGGGTCGTAG
Transcript >Hirsu2|10705
ATGGCGCTCAGGGCGGCGAAGCGAACGTGGTCCGGCGCTGTTGCGGCCGCGGCGCTCCTGACGCTCCTCCTATAT
CTGATGTTCGCGCGGCATCCGGCCGCGGCGCTCGAGCGGCTCCGGCCGTCCCGGTGGCCGGCGGCAGAGGACGGC
ATCCCGAACCAGGTGCACGTGGTGTACGTCCTGCGCGAGCCGACAGCCGACGTCGCCTTGGAGTTCGGCCAGGCG
CTGTGCGTCTTCGCGGCGCGGCACTACTGGCACCCGCGGCGCATCTACCTGCACACCGACGCCGGCCCCGAGGCG
GTGGCGCGGGCGCGCGACGGCCGGGCCGGCAAATGGAGCCGGCTCGTCCTCAACCTGCCCGAGGTGCGGGTCAGG
CGGGTGACGGCGCCGACGGAGGCCAACGGCGTGGAAATCAAACAGGTCGAGCACCGGTCCGACTTCGTGCGCGTG
CAGGTGGTGCGCGAGCTGGGCGGCGTCTACCTCGACTTGGACGCGCACCCGCTGCGGGACATCCGGCCGCTGCGG
CGGGCCGGCTTCGGCGCCGTCGGCGGCCGCCAGCACGGCGGGCAGGTCAACAGCGGCATCTTCATGGCGCGGCGC
GGCGCGCGCTTCGTGTCGCTGTGGCACGACGCCATGTTCCGCGTCTTCGACGGCGGCTGGACCACCCACAGCAAC
GACCTGGCCACCCGGTTCGGCCAGCAGCTCGTGACCGAGCCCGGCGAGATGCTCATCCTCGACCAGGCCGCCCTC
GCCCCGGGCAGCTGGCTGGAGCCGGACTGCGTCGACCTGTACGAGGCTCACGACGGCGGCGACGACGACGACGCG
CCCTCCTGGAGCCACAACTACTCCGACACGTACATCCTGCACGCCTTCAGCCCGGCCCGCGGCGGCTATCGCATC
AACGGCTTCGACCACATCACCCCGCGCTATGTGCTCGAGCGGAGGAGCAACTTTGCCCGCGCCGTCTTCCCCGTC
GCCAAGCTCATGCTCGACCGCGGCCTGATCGATATCGATGACTCCCACCTCGGGTCGTAG
Gene >Hirsu2|10705
ATGGCGCTCAGGGCGGCGAAGCGAACGTGGTCCGGCGCTGTTGCGGCCGCGGCGCTCCTGACGCTCCTCCTATAT
CTGATGTTCGCGCGGCATCCGGCCGCGGCGCTCGAGCGGCTCCGGCCGTCCCGGTGGCCGGCGGCAGAGGACGGC
ATCCCGAACCAGGTGCACGTGGTGTACGTCCTGCGCGAGCCGACAGCCGACGTCGCCTTGGAGTTCGGCCAGGCG
CTGTGCGTCTTCGCGGCGCGGCACTACTGGCACCCGCGGCGCATCTACCTGCACACCGACGCCGGCCCCGAGGCG
GTGGCGCGGGCGCGCGACGGCCGGGCCGGCAAATGGAGCCGGCTCGTCCTCAACCTGCCCGAGGTGCGGGTCAGG
CGGGTGACGGCGCCGACGGAGGCCAACGGCGTGGAAATCAAACAGGTCGAGCACCGGTCCGACTTCGTGCGCGTG
CAGGTGGTGCGCGAGCTGGGCGGCGTCTACCTCGACTTGGACGCGCACCCGCTGCGGGACATCCGGCCGCTGCGG
CGGGCCGGCTTCGGCGCCGTCGGCGGCCGCCAGCACGGCGGGCAGGTCAACAGCGGCATCTTCATGGCGCGGCGC
GGCGCGCGCTTCGTGTCGCTGTGGCACGACGCCATGTTCCGCGTCTTCGACGGCGGCTGGACCACCCACAGCAAC
GACCTGGCCACCCGGTTCGGCCAGCAGCTCGTGACCGAGCCCGGCGAGATGCTCATCCTCGACCAGGCCGCCCTC
GCCCCGGGCAGCTGGCTGGAGCCGGACTGCGTCGACCTGTACGAGGCTCACGACGGCGGCGACGACGACGACGCG
CCCTCCTGGAGCCACAACTACTCCGACACGTACATCCTGCACGCCTTCAGCCCGGCCCGCGGCGGCTATCGCATC
AACGGCTTCGACCACATCACCCCGCGCTATGTGCTCGAGCGGAGGAGCAACTTTGCCCGCGCCGTCTTCCCCGTC
GCCAAGCTCATGCTCGACCGCGGCCTGATCGATATCGATGACTCCCACCTCGGGTCGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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