© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|107 |
| Gene name | |
| Location | Contig_1015:569..2087 |
| Strand | - |
| Gene length (bp) | 1518 |
| Transcript length (bp) | 1386 |
| Coding sequence length (bp) | 1386 |
| Protein length (aa) | 462 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.564 | 0.6553 | 0.4916 | 0.0637 | 0.1418 | 0.0851 | 0.1268 | 0.0957 | 0.1656 | 0.0166 |
| Orthofinder run ID | 4 |
| Orthogroup | 8566 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|107 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|107 MEKQKGEAIESGLIPVNHSLSLSLPPRTQSLPLPPSRLCGAAASTILKAQCMRMGGAHGASTGGARRRNGLACEI AHRRGRVLGCQKSGGQRGRCRWSRVTKPSSPVSHVLAAVVSSSVKARNGEAAAAAAAAAPVKAADAVSEASTAAG ACVTRRDETRRDARRSHGERVRAPEQVTERRLPLLRSSSRQGYARRPSSWARGPCQDRGAEEPARQASASSALHP GRDPGRAEQVAGSKTERRDGAARRRGSPGTGGGSGRPHLPSAGLPLYRADEARWPPRRLGSGQSAGEDDRRGGTE QLTATCWAAIVGPFVGYCKEPGAARTSIICLSPLSPPLPSPSLDSPPPSTSPSIRLASIHPSPDTGHGGRSAGLW PSRSRSEENKSLPFRRGGAKSKAHGRDGDGDGPWPISHPSIHPPSGPGPGTPHSLPPPRPQTPAARASAHPDSRT HPAIVDTPSLP* |
| Coding | >Hirsu2|107 ATGGAGAAACAAAAAGGCGAGGCCATAGAGTCCGGCCTCATTCCGGTCAACCACTCTCTCTCTCTCTCTCTCCCG CCCCGCACCCAGTCTCTTCCCCTCCCCCCCTCGCGCTTGTGCGGTGCAGCTGCAAGCACTATATTAAAGGCACAG TGCATGCGCATGGGCGGCGCGCATGGGGCGTCGACAGGGGGGGCGCGGCGGCGCAACGGCCTGGCCTGCGAGATT GCGCATCGTCGAGGCCGCGTCCTTGGATGCCAGAAGTCGGGCGGCCAGCGCGGAAGATGCAGATGGAGTCGGGTT ACTAAGCCATCCAGCCCGGTCAGTCACGTGCTCGCAGCCGTCGTCTCCAGCTCGGTCAAGGCGCGGAATGGTGAG GCGGCAGCAGCAGCAGCAGCAGCAGCGCCGGTCAAGGCGGCCGACGCAGTTTCTGAAGCATCCACCGCAGCAGGG GCCTGCGTAACGAGGCGAGACGAGACGAGACGAGACGCGCGGCGAAGCCACGGCGAGAGAGTTCGCGCGCCGGAG CAAGTGACGGAGCGCCGACTCCCTCTGCTCCGCTCGTCCAGTCGCCAAGGTTATGCGCGGCGCCCGTCCAGCTGG GCTCGGGGCCCATGCCAAGATCGCGGAGCTGAAGAGCCAGCCAGGCAAGCCTCAGCCTCCTCCGCCCTCCATCCT GGCCGAGATCCTGGCCGAGCCGAGCAGGTCGCTGGTTCGAAGACGGAGCGGCGAGACGGAGCGGCGAGACGGAGG GGCTCGCCAGGAACAGGCGGCGGATCAGGCCGCCCTCATCTCCCCTCGGCGGGACTCCCCCTGTATCGAGCTGAC GAGGCCCGCTGGCCCCCTCGACGGCTGGGCAGCGGCCAATCAGCGGGCGAGGACGACAGGCGAGGAGGGACGGAA CAGCTCACCGCCACTTGTTGGGCGGCCATCGTCGGGCCCTTCGTCGGCTACTGCAAGGAACCAGGGGCAGCAAGG ACATCAATCATCTGTCTCTCCCCTCTGTCCCCTCCCCTCCCCTCCCCATCTCTCGACTCTCCTCCACCATCCACC TCTCCATCCATCCGTCTCGCATCCATCCATCCATCTCCGGACACGGGCCATGGCGGGCGCTCGGCCGGCCTCTGG CCCTCCCGAAGCCGATCGGAAGAAAACAAAAGTCTGCCTTTCCGTCGAGGCGGCGCAAAGTCAAAGGCGCACGGC CGCGACGGCGACGGCGACGGACCATGGCCCATCAGCCATCCCTCCATCCATCCACCGTCCGGTCCAGGTCCAGGC ACGCCGCACTCCCTCCCTCCTCCTCGACCGCAGACCCCGGCCGCCCGTGCCTCTGCCCATCCGGATAGCCGAACG CACCCCGCAATCGTGGACACACCCTCCCTGCCCTGA |
| Transcript | >Hirsu2|107 ATGGAGAAACAAAAAGGCGAGGCCATAGAGTCCGGCCTCATTCCGGTCAACCACTCTCTCTCTCTCTCTCTCCCG CCCCGCACCCAGTCTCTTCCCCTCCCCCCCTCGCGCTTGTGCGGTGCAGCTGCAAGCACTATATTAAAGGCACAG TGCATGCGCATGGGCGGCGCGCATGGGGCGTCGACAGGGGGGGCGCGGCGGCGCAACGGCCTGGCCTGCGAGATT GCGCATCGTCGAGGCCGCGTCCTTGGATGCCAGAAGTCGGGCGGCCAGCGCGGAAGATGCAGATGGAGTCGGGTT ACTAAGCCATCCAGCCCGGTCAGTCACGTGCTCGCAGCCGTCGTCTCCAGCTCGGTCAAGGCGCGGAATGGTGAG GCGGCAGCAGCAGCAGCAGCAGCAGCGCCGGTCAAGGCGGCCGACGCAGTTTCTGAAGCATCCACCGCAGCAGGG GCCTGCGTAACGAGGCGAGACGAGACGAGACGAGACGCGCGGCGAAGCCACGGCGAGAGAGTTCGCGCGCCGGAG CAAGTGACGGAGCGCCGACTCCCTCTGCTCCGCTCGTCCAGTCGCCAAGGTTATGCGCGGCGCCCGTCCAGCTGG GCTCGGGGCCCATGCCAAGATCGCGGAGCTGAAGAGCCAGCCAGGCAAGCCTCAGCCTCCTCCGCCCTCCATCCT GGCCGAGATCCTGGCCGAGCCGAGCAGGTCGCTGGTTCGAAGACGGAGCGGCGAGACGGAGCGGCGAGACGGAGG GGCTCGCCAGGAACAGGCGGCGGATCAGGCCGCCCTCATCTCCCCTCGGCGGGACTCCCCCTGTATCGAGCTGAC GAGGCCCGCTGGCCCCCTCGACGGCTGGGCAGCGGCCAATCAGCGGGCGAGGACGACAGGCGAGGAGGGACGGAA CAGCTCACCGCCACTTGTTGGGCGGCCATCGTCGGGCCCTTCGTCGGCTACTGCAAGGAACCAGGGGCAGCAAGG ACATCAATCATCTGTCTCTCCCCTCTGTCCCCTCCCCTCCCCTCCCCATCTCTCGACTCTCCTCCACCATCCACC TCTCCATCCATCCGTCTCGCATCCATCCATCCATCTCCGGACACGGGCCATGGCGGGCGCTCGGCCGGCCTCTGG CCCTCCCGAAGCCGATCGGAAGAAAACAAAAGTCTGCCTTTCCGTCGAGGCGGCGCAAAGTCAAAGGCGCACGGC CGCGACGGCGACGGCGACGGACCATGGCCCATCAGCCATCCCTCCATCCATCCACCGTCCGGTCCAGGTCCAGGC ACGCCGCACTCCCTCCCTCCTCCTCGACCGCAGACCCCGGCCGCCCGTGCCTCTGCCCATCCGGATAGCCGAACG CACCCCGCAATCGTGGACACACCCTCCCTGCCCTGA |
| Gene | >Hirsu2|107 ATGGAGAAACAAAAAGGCGAGGCCATAGAGTCCGGCCTCATTCCGGTCAACCACTCTCTCTCTCTCTCTCTCCCG CCCCGCACCCAGTCTCTTCCCCTCCCCCCCTCGCGCTTGTGCGGTGCAGCTGCAAGCACTATATTAAAGGCACAG TGCATGCGCATGGGCGGCGCGCATGGGGCGTCGACAGGGGGGGCGCGGCGGCGCAACGGCCTGGCCTGCGAGATT GCGCATCGTCGAGGCCGCGTCCTTGGATGCCAGAAGTCGGGCGGCCAGCGCGGAAGATGCAGATGGAGTCGGGTT ACTAAGCCATCCAGCCCGGTCAGTCACGTGCTCGCAGCCGTCGTCTCCAGCTCGGTCAAGGCGCGGAATGGTGAG GCGGCAGCAGCAGCAGCAGCAGCAGCGCCGGTCAAGGCGGCCGACGCAGTTTCTGAAGCATCCACCGCAGCAGGG GCCTGCGTAACGAGGCGAGACGAGACGAGACGAGACGCGCGGCGAAGCCACGGCGAGAGAGTTCGCGCGCCGGAG CAAGTGACGGAGCGCCGACTCCCTCTGCTCCGCTCGTCCAGTCGCCAAGGTTATGCGCGGCGCCCGTCCAGCTGG GCTCGGGGCCCATGCCAAGATCGCGGAGCTGAAGAGCCAGCCAGGCAAGCCTCAGCCTCCTCCGCCCTCCATCCT GGCCGAGATCCTGGCCGAGCCGAGCAGGTCGCTGGTTCGAAGACGGAGCGGCGAGACGGAGCGGCGAGACGGAGG GGCTCGCCAGGAACAGGCGGCGGATCAGGCCGCCCTCATCTCCCCTCGGCGGGACTCCCGTCGTCGACAGGGGCT TGAGCCGCCTCCACCAGCGGCGCATGACGCCATCGCCACGGGATTCCTGTCCTGCCCGAATCCCATTTCTCGATT TGCCCTCATGACCACTGTCCCTGGTATCTACCTAGGTACAGCCTGTATCGAGCTGACGAGGCCCGCTGGCCCCCT CGACGGCTGGGCAGCGGCCAATCAGCGGGCGAGGACGACAGGCGAGGAGGGACGGAACAGCTCACCGCCACTTGT TGGGCGGCCATCGTCGGGCCCTTCGTCGGCTACTGCAAGGAACCAGGGGCAGCAAGGACATCAATCATCTGTCTC TCCCCTCTGTCCCCTCCCCTCCCCTCCCCATCTCTCGACTCTCCTCCACCATCCACCTCTCCATCCATCCGTCTC GCATCCATCCATCCATCTCCGGACACGGGCCATGGCGGGCGCTCGGCCGGCCTCTGGCCCTCCCGAAGCCGATCG GAAGAAAACAAAAGTCTGCCTTTCCGTCGAGGCGGCGCAAAGTCAAAGGCGCACGGCCGCGACGGCGACGGCGAC GGACCATGGCCCATCAGCCATCCCTCCATCCATCCACCGTCCGGTCCAGGTCCAGGCACGCCGCACTCCCTCCCT CCTCCTCGACCGCAGACCCCGGCCGCCCGTGCCTCTGCCCATCCGGATAGCCGAACGCACCCCGCAATCGTGGAC ACACCCTCCCTGCCCTGA |