Protein ID | Hirsu2|10670 |
Gene name | |
Location | Contig_887:4219..5751 |
Strand | - |
Gene length (bp) | 1532 |
Transcript length (bp) | 1413 |
Coding sequence length (bp) | 1413 |
Protein length (aa) | 471 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11927 | DUF3445 | Protein of unknown function (DUF3445) | 4.5E-72 | 163 | 396 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 25 | 18 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10670 MDNASCFGLILAACGLAFAIHALVIGREASRRLCAVWLHPKREPSHESDPGYSRTFPPSQHALLSDVAPEVLSPI YEREADFDLSTSPEKVLELDADYRLADPERFLFSGFTVGEVRALGDFPDYARLSGVPLPSPALNFSIDHSKPRPY RPFRWPYHQTMSLQKLDTDFWLELESSYRERIRQRQALYAEHGQLVMDFMPGSELARKELMEMVLQFLCARYPQY FELTGSTLANRILGTKHDLAATEPLRVLLDNVPEDFALVLRDHESGCYYFRAGIICSAVGWSLGQKMGLSLSAIH RPVPDFEEKIAFSVDRFFTKMAAPNPIQRASWGLEVGQPLYLPSTHDDFLAREHQNPDLGPEDVFLRVDWQTLRR LPLSGAVLFNFKALFTPISEFRDEPYVPSLLLKVLNEGKENIMKYKGTWHVEHVAKPTLEAYERFQIEQGLMTGQ WEAKTLDENPFFPGWKQKCR* |
Coding | >Hirsu2|10670 ATGGATAACGCTTCTTGTTTCGGCCTCATCTTGGCCGCCTGCGGTCTTGCTTTTGCCATCCACGCTCTCGTCATT GGCCGGGAAGCTTCACGCCGCCTCTGCGCCGTCTGGCTACACCCCAAGAGAGAGCCGAGTCACGAATCCGACCCC GGCTATTCCCGCACCTTTCCTCCCTCGCAGCACGCCCTCCTCTCAGATGTCGCTCCCGAGGTCCTATCCCCTATT TACGAACGCGAAGCTGATTTCGACCTGTCGACATCTCCCGAAAAAGTCCTCGAACTGGACGCCGACTATCGCCTG GCGGACCCGGAGAGGTTCCTCTTCAGTGGTTTCACCGTTGGCGAAGTCCGCGCGTTGGGCGACTTTCCCGACTAT GCAAGGCTGTCGGGCGTTCCGCTACCCTCTCCCGCGCTCAACTTCAGCATCGACCACAGCAAGCCGAGGCCGTAT AGGCCGTTCAGATGGCCCTACCATCAGACCATGTCCCTGCAGAAGCTTGACACCGACTTCTGGCTCGAGTTGGAG AGCAGCTATCGAGAGCGCATCCGCCAGCGCCAGGCGCTGTATGCCGAGCACGGGCAACTGGTCATGGACTTCATG CCCGGGTCGGAGCTGGCGCGCAAGGAGCTGATGGAAATGGTGCTGCAGTTCCTCTGCGCACGCTATCCCCAGTAT TTCGAGCTTACAGGCAGCACACTGGCCAACCGCATCCTGGGGACCAAGCACGACCTCGCCGCTACCGAGCCGCTC CGCGTCTTGCTCGACAACGTGCCGGAAGATTTCGCCTTGGTCCTGCGCGACCACGAGAGCGGCTGCTACTACTTC CGCGCGGGCATCATCTGCTCGGCCGTCGGCTGGAGTCTCGGGCAAAAGATGGGCTTGAGCCTGTCTGCCATTCAC CGGCCCGTGCCGGACTTTGAGGAGAAGATCGCGTTCAGCGTCGATCGGTTCTTCACCAAGATGGCGGCGCCCAAC CCCATCCAGCGAGCATCGTGGGGGCTTGAAGTGGGACAGCCGCTTTACCTGCCGTCGACGCACGATGACTTCTTG GCCCGGGAGCACCAGAATCCCGACCTTGGCCCGGAAGACGTTTTTCTGCGAGTCGACTGGCAGACGCTACGCCGG CTGCCCCTTTCGGGAGCAGTGCTCTTCAACTTCAAGGCCCTGTTCACCCCGATCAGCGAGTTTCGGGACGAGCCG TACGTCCCGTCGCTCCTGCTCAAGGTTCTCAACGAGGGCAAGGAGAACATCATGAAATACAAGGGGACGTGGCAC GTCGAACACGTTGCGAAGCCGACGCTCGAGGCGTACGAGCGTTTCCAGATCGAGCAGGGGCTGATGACGGGTCAG TGGGAGGCCAAAACGCTCGACGAGAACCCCTTCTTCCCAGGGTGGAAGCAGAAATGTAGATAG |
Transcript | >Hirsu2|10670 ATGGATAACGCTTCTTGTTTCGGCCTCATCTTGGCCGCCTGCGGTCTTGCTTTTGCCATCCACGCTCTCGTCATT GGCCGGGAAGCTTCACGCCGCCTCTGCGCCGTCTGGCTACACCCCAAGAGAGAGCCGAGTCACGAATCCGACCCC GGCTATTCCCGCACCTTTCCTCCCTCGCAGCACGCCCTCCTCTCAGATGTCGCTCCCGAGGTCCTATCCCCTATT TACGAACGCGAAGCTGATTTCGACCTGTCGACATCTCCCGAAAAAGTCCTCGAACTGGACGCCGACTATCGCCTG GCGGACCCGGAGAGGTTCCTCTTCAGTGGTTTCACCGTTGGCGAAGTCCGCGCGTTGGGCGACTTTCCCGACTAT GCAAGGCTGTCGGGCGTTCCGCTACCCTCTCCCGCGCTCAACTTCAGCATCGACCACAGCAAGCCGAGGCCGTAT AGGCCGTTCAGATGGCCCTACCATCAGACCATGTCCCTGCAGAAGCTTGACACCGACTTCTGGCTCGAGTTGGAG AGCAGCTATCGAGAGCGCATCCGCCAGCGCCAGGCGCTGTATGCCGAGCACGGGCAACTGGTCATGGACTTCATG CCCGGGTCGGAGCTGGCGCGCAAGGAGCTGATGGAAATGGTGCTGCAGTTCCTCTGCGCACGCTATCCCCAGTAT TTCGAGCTTACAGGCAGCACACTGGCCAACCGCATCCTGGGGACCAAGCACGACCTCGCCGCTACCGAGCCGCTC CGCGTCTTGCTCGACAACGTGCCGGAAGATTTCGCCTTGGTCCTGCGCGACCACGAGAGCGGCTGCTACTACTTC CGCGCGGGCATCATCTGCTCGGCCGTCGGCTGGAGTCTCGGGCAAAAGATGGGCTTGAGCCTGTCTGCCATTCAC CGGCCCGTGCCGGACTTTGAGGAGAAGATCGCGTTCAGCGTCGATCGGTTCTTCACCAAGATGGCGGCGCCCAAC CCCATCCAGCGAGCATCGTGGGGGCTTGAAGTGGGACAGCCGCTTTACCTGCCGTCGACGCACGATGACTTCTTG GCCCGGGAGCACCAGAATCCCGACCTTGGCCCGGAAGACGTTTTTCTGCGAGTCGACTGGCAGACGCTACGCCGG CTGCCCCTTTCGGGAGCAGTGCTCTTCAACTTCAAGGCCCTGTTCACCCCGATCAGCGAGTTTCGGGACGAGCCG TACGTCCCGTCGCTCCTGCTCAAGGTTCTCAACGAGGGCAAGGAGAACATCATGAAATACAAGGGGACGTGGCAC GTCGAACACGTTGCGAAGCCGACGCTCGAGGCGTACGAGCGTTTCCAGATCGAGCAGGGGCTGATGACGGGTCAG TGGGAGGCCAAAACGCTCGACGAGAACCCCTTCTTCCCAGGGTGGAAGCAGAAATGTAGATAG |
Gene | >Hirsu2|10670 ATGGATAACGCTTCTTGTTTCGGCCTCATCTTGGCCGCCTGCGGTCTTGCTTTTGCCATCCACGCTCTCGTCATT GGCCGGGAAGCTTCACGCCGCCTCTGCGCCGTCTGGCTACACCCCAAGAGAGAGCCGAGTCACGAATCCGACCCC GGCTATTCCCGCACCTTTCCTCCCTCGCAGCACGCCCTCCTCTCAGATGTCGCTCCCGAGGTCCTATCCCCTATT TACGAACGCGAAGCTGATTTCGACCTGTCGACATCTCCCGAAAAAGTCCTCGAACTGGACGCCGACTATCGCCTG GCGGACCCGGAGAGGTTCCTCTTCAGTGGTTTCACCGTTGGCGAAGTCCGCGCGTTGGGCGACTTTCCCGACTAT GCAAGGCTGTCGGGCGTTCCGCTACCCTCTCCCGCGCTCAACTTCAGCATCGACCACAGCAAGCCGAGGCCGTAT AGGCCGTTCAGATGGCCCTACCATCAGACCATGTGTAGGTGGTGCTTCGCGTCGGGGTAAACCAGGCTGATCGAT GTGACCTGCTCGGCGAAGCCCTGCAGAAGCTTGACACCGACTTCTGGCTCGAGTTGGAGAGCAGCTATCGAGAGC GCATCCGCCAGCGCCAGGCGCTGTATGCCGAGCACGGGCAACTGGTCATGGACTTCATGCCCGGGTCGGAGCTGG CGCGCAAGGAGCTGATGGAAATGGTGCTGCAGTTCCTCTGCGCACGCTATCCCCAGTATTTCGAGCTTACAGGCA GCACACTGGCCAACCGCATCCTGGGGACCAAGCACGACCTCGCCGCTACCGAGCCGCTCCGCGTCTTGCTCGACA ACGTGCCGGAAGATTTCGCCTTGGTCCTGCGCGACCACGAGAGCGGCTGCTACTACTTCCGCGCGGGCATCATCT GCTCGGCCGTCGGCTGGAGTCTCGGGCAAAAGATGGGCTTGAGCCTGTCTGCCATTCACCGGCCCGTGCCGGACT TTGAGGAGAAGATCGCGTTCAGCGTCGATCGGTACAGCCGCGTCCCAGCATGACCGCCCTCGCTTGGCAAGGCTG ACGGGACCGTGCCCAGGTTCTTCACCAAGATGGCGGCGCCCAACCCCATCCAGCGAGCATCGTGGGGGCTTGAAG TGGGACAGCCGCTTTACCTGCCGTCGACGCACGATGACTTCTTGGCCCGGGAGCACCAGAATCCCGACCTTGGCC CGGAAGACGTTTTTCTGCGAGTCGACTGGCAGACGCTACGCCGGCTGCCCCTTTCGGGAGCAGTGCTCTTCAACT TCAAGGCCCTGTTCACCCCGATCAGCGAGTTTCGGGACGAGCCGTACGTCCCGTCGCTCCTGCTCAAGGTTCTCA ACGAGGGCAAGGAGAACATCATGAAATACAAGGGGACGTGGCACGTCGAACACGTTGCGAAGCCGACGCTCGAGG CGTACGAGCGTTTCCAGATCGAGCAGGGGCTGATGACGGGTCAGTGGGAGGCCAAAACGCTCGACGAGAACCCCT TCTTCCCAGGGTGGAAGCAGAAATGTAGATAG |