Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10670
Gene name
LocationContig_887:4219..5751
Strand-
Gene length (bp)1532
Transcript length (bp)1413
Coding sequence length (bp)1413
Protein length (aa) 471

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11927 DUF3445 Protein of unknown function (DUF3445) 2.8E-72 163 396

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 7 25 18

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10670
MDNASCFGLILAACGLAFAIHALVIGREASRRLCAVWLHPKREPSHESDPGYSRTFPPSQHALLSDVAPEVLSPI
YEREADFDLSTSPEKVLELDADYRLADPERFLFSGFTVGEVRALGDFPDYARLSGVPLPSPALNFSIDHSKPRPY
RPFRWPYHQTMSLQKLDTDFWLELESSYRERIRQRQALYAEHGQLVMDFMPGSELARKELMEMVLQFLCARYPQY
FELTGSTLANRILGTKHDLAATEPLRVLLDNVPEDFALVLRDHESGCYYFRAGIICSAVGWSLGQKMGLSLSAIH
RPVPDFEEKIAFSVDRFFTKMAAPNPIQRASWGLEVGQPLYLPSTHDDFLAREHQNPDLGPEDVFLRVDWQTLRR
LPLSGAVLFNFKALFTPISEFRDEPYVPSLLLKVLNEGKENIMKYKGTWHVEHVAKPTLEAYERFQIEQGLMTGQ
WEAKTLDENPFFPGWKQKCR*
Coding >Hirsu2|10670
ATGGATAACGCTTCTTGTTTCGGCCTCATCTTGGCCGCCTGCGGTCTTGCTTTTGCCATCCACGCTCTCGTCATT
GGCCGGGAAGCTTCACGCCGCCTCTGCGCCGTCTGGCTACACCCCAAGAGAGAGCCGAGTCACGAATCCGACCCC
GGCTATTCCCGCACCTTTCCTCCCTCGCAGCACGCCCTCCTCTCAGATGTCGCTCCCGAGGTCCTATCCCCTATT
TACGAACGCGAAGCTGATTTCGACCTGTCGACATCTCCCGAAAAAGTCCTCGAACTGGACGCCGACTATCGCCTG
GCGGACCCGGAGAGGTTCCTCTTCAGTGGTTTCACCGTTGGCGAAGTCCGCGCGTTGGGCGACTTTCCCGACTAT
GCAAGGCTGTCGGGCGTTCCGCTACCCTCTCCCGCGCTCAACTTCAGCATCGACCACAGCAAGCCGAGGCCGTAT
AGGCCGTTCAGATGGCCCTACCATCAGACCATGTCCCTGCAGAAGCTTGACACCGACTTCTGGCTCGAGTTGGAG
AGCAGCTATCGAGAGCGCATCCGCCAGCGCCAGGCGCTGTATGCCGAGCACGGGCAACTGGTCATGGACTTCATG
CCCGGGTCGGAGCTGGCGCGCAAGGAGCTGATGGAAATGGTGCTGCAGTTCCTCTGCGCACGCTATCCCCAGTAT
TTCGAGCTTACAGGCAGCACACTGGCCAACCGCATCCTGGGGACCAAGCACGACCTCGCCGCTACCGAGCCGCTC
CGCGTCTTGCTCGACAACGTGCCGGAAGATTTCGCCTTGGTCCTGCGCGACCACGAGAGCGGCTGCTACTACTTC
CGCGCGGGCATCATCTGCTCGGCCGTCGGCTGGAGTCTCGGGCAAAAGATGGGCTTGAGCCTGTCTGCCATTCAC
CGGCCCGTGCCGGACTTTGAGGAGAAGATCGCGTTCAGCGTCGATCGGTTCTTCACCAAGATGGCGGCGCCCAAC
CCCATCCAGCGAGCATCGTGGGGGCTTGAAGTGGGACAGCCGCTTTACCTGCCGTCGACGCACGATGACTTCTTG
GCCCGGGAGCACCAGAATCCCGACCTTGGCCCGGAAGACGTTTTTCTGCGAGTCGACTGGCAGACGCTACGCCGG
CTGCCCCTTTCGGGAGCAGTGCTCTTCAACTTCAAGGCCCTGTTCACCCCGATCAGCGAGTTTCGGGACGAGCCG
TACGTCCCGTCGCTCCTGCTCAAGGTTCTCAACGAGGGCAAGGAGAACATCATGAAATACAAGGGGACGTGGCAC
GTCGAACACGTTGCGAAGCCGACGCTCGAGGCGTACGAGCGTTTCCAGATCGAGCAGGGGCTGATGACGGGTCAG
TGGGAGGCCAAAACGCTCGACGAGAACCCCTTCTTCCCAGGGTGGAAGCAGAAATGTAGATAG
Transcript >Hirsu2|10670
ATGGATAACGCTTCTTGTTTCGGCCTCATCTTGGCCGCCTGCGGTCTTGCTTTTGCCATCCACGCTCTCGTCATT
GGCCGGGAAGCTTCACGCCGCCTCTGCGCCGTCTGGCTACACCCCAAGAGAGAGCCGAGTCACGAATCCGACCCC
GGCTATTCCCGCACCTTTCCTCCCTCGCAGCACGCCCTCCTCTCAGATGTCGCTCCCGAGGTCCTATCCCCTATT
TACGAACGCGAAGCTGATTTCGACCTGTCGACATCTCCCGAAAAAGTCCTCGAACTGGACGCCGACTATCGCCTG
GCGGACCCGGAGAGGTTCCTCTTCAGTGGTTTCACCGTTGGCGAAGTCCGCGCGTTGGGCGACTTTCCCGACTAT
GCAAGGCTGTCGGGCGTTCCGCTACCCTCTCCCGCGCTCAACTTCAGCATCGACCACAGCAAGCCGAGGCCGTAT
AGGCCGTTCAGATGGCCCTACCATCAGACCATGTCCCTGCAGAAGCTTGACACCGACTTCTGGCTCGAGTTGGAG
AGCAGCTATCGAGAGCGCATCCGCCAGCGCCAGGCGCTGTATGCCGAGCACGGGCAACTGGTCATGGACTTCATG
CCCGGGTCGGAGCTGGCGCGCAAGGAGCTGATGGAAATGGTGCTGCAGTTCCTCTGCGCACGCTATCCCCAGTAT
TTCGAGCTTACAGGCAGCACACTGGCCAACCGCATCCTGGGGACCAAGCACGACCTCGCCGCTACCGAGCCGCTC
CGCGTCTTGCTCGACAACGTGCCGGAAGATTTCGCCTTGGTCCTGCGCGACCACGAGAGCGGCTGCTACTACTTC
CGCGCGGGCATCATCTGCTCGGCCGTCGGCTGGAGTCTCGGGCAAAAGATGGGCTTGAGCCTGTCTGCCATTCAC
CGGCCCGTGCCGGACTTTGAGGAGAAGATCGCGTTCAGCGTCGATCGGTTCTTCACCAAGATGGCGGCGCCCAAC
CCCATCCAGCGAGCATCGTGGGGGCTTGAAGTGGGACAGCCGCTTTACCTGCCGTCGACGCACGATGACTTCTTG
GCCCGGGAGCACCAGAATCCCGACCTTGGCCCGGAAGACGTTTTTCTGCGAGTCGACTGGCAGACGCTACGCCGG
CTGCCCCTTTCGGGAGCAGTGCTCTTCAACTTCAAGGCCCTGTTCACCCCGATCAGCGAGTTTCGGGACGAGCCG
TACGTCCCGTCGCTCCTGCTCAAGGTTCTCAACGAGGGCAAGGAGAACATCATGAAATACAAGGGGACGTGGCAC
GTCGAACACGTTGCGAAGCCGACGCTCGAGGCGTACGAGCGTTTCCAGATCGAGCAGGGGCTGATGACGGGTCAG
TGGGAGGCCAAAACGCTCGACGAGAACCCCTTCTTCCCAGGGTGGAAGCAGAAATGTAGATAG
Gene >Hirsu2|10670
ATGGATAACGCTTCTTGTTTCGGCCTCATCTTGGCCGCCTGCGGTCTTGCTTTTGCCATCCACGCTCTCGTCATT
GGCCGGGAAGCTTCACGCCGCCTCTGCGCCGTCTGGCTACACCCCAAGAGAGAGCCGAGTCACGAATCCGACCCC
GGCTATTCCCGCACCTTTCCTCCCTCGCAGCACGCCCTCCTCTCAGATGTCGCTCCCGAGGTCCTATCCCCTATT
TACGAACGCGAAGCTGATTTCGACCTGTCGACATCTCCCGAAAAAGTCCTCGAACTGGACGCCGACTATCGCCTG
GCGGACCCGGAGAGGTTCCTCTTCAGTGGTTTCACCGTTGGCGAAGTCCGCGCGTTGGGCGACTTTCCCGACTAT
GCAAGGCTGTCGGGCGTTCCGCTACCCTCTCCCGCGCTCAACTTCAGCATCGACCACAGCAAGCCGAGGCCGTAT
AGGCCGTTCAGATGGCCCTACCATCAGACCATGTGTAGGTGGTGCTTCGCGTCGGGGTAAACCAGGCTGATCGAT
GTGACCTGCTCGGCGAAGCCCTGCAGAAGCTTGACACCGACTTCTGGCTCGAGTTGGAGAGCAGCTATCGAGAGC
GCATCCGCCAGCGCCAGGCGCTGTATGCCGAGCACGGGCAACTGGTCATGGACTTCATGCCCGGGTCGGAGCTGG
CGCGCAAGGAGCTGATGGAAATGGTGCTGCAGTTCCTCTGCGCACGCTATCCCCAGTATTTCGAGCTTACAGGCA
GCACACTGGCCAACCGCATCCTGGGGACCAAGCACGACCTCGCCGCTACCGAGCCGCTCCGCGTCTTGCTCGACA
ACGTGCCGGAAGATTTCGCCTTGGTCCTGCGCGACCACGAGAGCGGCTGCTACTACTTCCGCGCGGGCATCATCT
GCTCGGCCGTCGGCTGGAGTCTCGGGCAAAAGATGGGCTTGAGCCTGTCTGCCATTCACCGGCCCGTGCCGGACT
TTGAGGAGAAGATCGCGTTCAGCGTCGATCGGTACAGCCGCGTCCCAGCATGACCGCCCTCGCTTGGCAAGGCTG
ACGGGACCGTGCCCAGGTTCTTCACCAAGATGGCGGCGCCCAACCCCATCCAGCGAGCATCGTGGGGGCTTGAAG
TGGGACAGCCGCTTTACCTGCCGTCGACGCACGATGACTTCTTGGCCCGGGAGCACCAGAATCCCGACCTTGGCC
CGGAAGACGTTTTTCTGCGAGTCGACTGGCAGACGCTACGCCGGCTGCCCCTTTCGGGAGCAGTGCTCTTCAACT
TCAAGGCCCTGTTCACCCCGATCAGCGAGTTTCGGGACGAGCCGTACGTCCCGTCGCTCCTGCTCAAGGTTCTCA
ACGAGGGCAAGGAGAACATCATGAAATACAAGGGGACGTGGCACGTCGAACACGTTGCGAAGCCGACGCTCGAGG
CGTACGAGCGTTTCCAGATCGAGCAGGGGCTGATGACGGGTCAGTGGGAGGCCAAAACGCTCGACGAGAACCCCT
TCTTCCCAGGGTGGAAGCAGAAATGTAGATAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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