Protein ID | Hirsu2|1066 |
Gene name | |
Location | Contig_122:24622..25033 |
Strand | + |
Gene length (bp) | 411 |
Transcript length (bp) | 312 |
Coding sequence length (bp) | 312 |
Protein length (aa) | 104 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0642 | 0.044 | 0.9307 | 0.0734 | 0.0721 | 0.0152 | 0.0896 | 0.0869 | 0.049 | 0.0061 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 16 | 0.999728 |
Orthofinder run ID | 4 |
Orthogroup | 132 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1066 MKFSLAPLVLASVAYAATQNSAAAQMEAGLIDGLLGKAECALGCVLTPADKLRCGSGGPASALCHNFGKLEAESS GCISKKCGIDSGLKQTVLGLLKKACSRY* |
Coding | >Hirsu2|1066 ATGAAGTTCTCGCTCGCCCCTCTCGTCCTCGCCAGCGTCGCCTACGCCGCGACGCAGAACAGCGCCGCCGCGCAG ATGGAGGCCGGCCTCATCGACGGCCTCCTCGGCAAGGCCGAGTGCGCCCTCGGCTGCGTCCTCACGCCGGCCGAC AAGCTCCGCTGCGGCAGCGGCGGCCCCGCCAGCGCCCTGTGCCACAACTTCGGCAAGCTCGAGGCCGAGTCTTCC GGCTGCATCTCCAAGAAGTGCGGCATTGACTCCGGCCTGAAGCAAACCGTCCTCGGCCTCCTTAAGAAGGCGTGC TCCAGGTACTAG |
Transcript | >Hirsu2|1066 ATGAAGTTCTCGCTCGCCCCTCTCGTCCTCGCCAGCGTCGCCTACGCCGCGACGCAGAACAGCGCCGCCGCGCAG ATGGAGGCCGGCCTCATCGACGGCCTCCTCGGCAAGGCCGAGTGCGCCCTCGGCTGCGTCCTCACGCCGGCCGAC AAGCTCCGCTGCGGCAGCGGCGGCCCCGCCAGCGCCCTGTGCCACAACTTCGGCAAGCTCGAGGCCGAGTCTTCC GGCTGCATCTCCAAGAAGTGCGGCATTGACTCCGGCCTGAAGCAAACCGTCCTCGGCCTCCTTAAGAAGGCGTGC TCCAGGTACTAG |
Gene | >Hirsu2|1066 ATGAAGTTCTCGCTCGCCCCTCTCGTCCTCGCCAGCGTCGCCTACGCCGCGACGCAGAACAGCGCCGCCGCGCAG ATGGAGGCCGGCCTCATCGACGGCCTCCTCGGCAAGGCCGAGTGCGCCCTCGGCTGCGTCCTCACGCCGGCCGAC AAGCTCCGCTGCGGCAGCGGCGGCCCCGCCAGCGCCCTGTGCCACAACTTCGGCAAGCTCGAGGCCGAGTCTTCC GGCTGCATCTCCAAGAAGTGCGGCATTGACTCCGGCCTGAAGCGTAGGTCGCCCCGGCGCCGGTGTCCACCCTCA AACGTCGTTGATATAGAGATACGTGTAAACATGGACCACGGGCTAACTAATTCCTTCCCATCGCCAGAAACCGTC CTCGGCCTCCTTAAGAAGGCGTGCTCCAGGTACTAG |