© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1065 |
| Gene name | |
| Location | Contig_122:20368..20785 |
| Strand | - |
| Gene length (bp) | 417 |
| Transcript length (bp) | 417 |
| Coding sequence length (bp) | 417 |
| Protein length (aa) | 139 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | 0.3778 | 0.2909 | 0.6021 | 0.1027 | 0.5508 | 0.1987 | 0.0476 | 0.0639 | 0.0845 | 0.1323 |
| Orthofinder run ID | 4 |
| Orthogroup | 5999 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|4688 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|3197 |
| Ophiocordyceps subramaniannii | Hirsu2|1065 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1065 MLRQAVDTINRSVGHGERRQPKGMSVRSNPRPFTRVTHGAKDVQVIEKDVSNLAAIGVKVASVQELMWSGEVIPG KPHMTFIGTIEQVSAKIESIRRSAKAVDEDSEVDVSSPELRKRDVRMTCSRGRWEVAKLSSTL* |
| Coding | >Hirsu2|1065 ATGTTGCGGCAGGCAGTTGACACAATAAATCGGTCGGTAGGACATGGCGAGAGACGTCAGCCGAAAGGTATGTCT GTCCGGTCCAATCCCCGCCCCTTTACCAGAGTGACCCATGGCGCTAAAGATGTCCAGGTTATTGAGAAAGACGTA TCGAACCTCGCCGCCATTGGCGTTAAGGTTGCCTCTGTCCAGGAGCTCATGTGGTCTGGCGAGGTGATTCCCGGA AAACCCCACATGACCTTTATCGGCACCATCGAGCAAGTTTCTGCCAAGATCGAGTCCATCCGCCGCTCCGCCAAA GCCGTGGACGAAGACAGTGAGGTCGACGTGTCTAGCCCCGAGCTCAGAAAGCGTGATGTACGCATGACTTGCTCC CGGGGCCGATGGGAAGTGGCCAAGCTTTCTTCAACTCTCTAA |
| Transcript | >Hirsu2|1065 ATGTTGCGGCAGGCAGTTGACACAATAAATCGGTCGGTAGGACATGGCGAGAGACGTCAGCCGAAAGGTATGTCT GTCCGGTCCAATCCCCGCCCCTTTACCAGAGTGACCCATGGCGCTAAAGATGTCCAGGTTATTGAGAAAGACGTA TCGAACCTCGCCGCCATTGGCGTTAAGGTTGCCTCTGTCCAGGAGCTCATGTGGTCTGGCGAGGTGATTCCCGGA AAACCCCACATGACCTTTATCGGCACCATCGAGCAAGTTTCTGCCAAGATCGAGTCCATCCGCCGCTCCGCCAAA GCCGTGGACGAAGACAGTGAGGTCGACGTGTCTAGCCCCGAGCTCAGAAAGCGTGATGTACGCATGACTTGCTCC CGGGGCCGATGGGAAGTGGCCAAGCTTTCTTCAACTCTCTAA |
| Gene | >Hirsu2|1065 ATGTTGCGGCAGGCAGTTGACACAATAAATCGGTCGGTAGGACATGGCGAGAGACGTCAGCCGAAAGGTATGTCT GTCCGGTCCAATCCCCGCCCCTTTACCAGAGTGACCCATGGCGCTAAAGATGTCCAGGTTATTGAGAAAGACGTA TCGAACCTCGCCGCCATTGGCGTTAAGGTTGCCTCTGTCCAGGAGCTCATGTGGTCTGGCGAGGTGATTCCCGGA AAACCCCACATGACCTTTATCGGCACCATCGAGCAAGTTTCTGCCAAGATCGAGTCCATCCGCCGCTCCGCCAAA GCCGTGGACGAAGACAGTGAGGTCGACGTGTCTAGCCCCGAGCTCAGAAAGCGTGATGTACGCATGACTTGCTCC CGGGGCCGATGGGAAGTGGCCAAGCTTTCTTCAACTCTCTAA |