Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10646
Gene name
LocationContig_881:1098..1497
Strand-
Gene length (bp)399
Transcript length (bp)252
Coding sequence length (bp)252
Protein length (aa) 84

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08571 Yos1 Yos1-like 7.5E-34 4 83

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O13825|YOS1_SCHPO Protein transport protein yos1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yos1 PE=3 SV=1 1 83 3.0E-22
sp|Q3E834|YOS1_YEAST Protein transport protein YOS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOS1 PE=1 SV=1 4 83 4.0E-18
sp|Q4VBI2|IR3IP_DANRE Immediate early response 3-interacting protein 1 OS=Danio rerio GN=ier3ip1 PE=3 SV=1 11 83 3.0E-13
sp|Q9Y5U9|IR3IP_HUMAN Immediate early response 3-interacting protein 1 OS=Homo sapiens GN=IER3IP1 PE=1 SV=1 6 83 2.0E-12
sp|Q1JQC2|IR3IP_BOVIN Immediate early response 3-interacting protein 1 OS=Bos taurus GN=IER3IP1 PE=3 SV=1 6 83 2.0E-12
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O13825|YOS1_SCHPO Protein transport protein yos1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yos1 PE=3 SV=1 1 83 3.0E-22
sp|Q3E834|YOS1_YEAST Protein transport protein YOS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOS1 PE=1 SV=1 4 83 4.0E-18
sp|Q4VBI2|IR3IP_DANRE Immediate early response 3-interacting protein 1 OS=Danio rerio GN=ier3ip1 PE=3 SV=1 11 83 3.0E-13
sp|Q9Y5U9|IR3IP_HUMAN Immediate early response 3-interacting protein 1 OS=Homo sapiens GN=IER3IP1 PE=1 SV=1 6 83 2.0E-12
sp|Q1JQC2|IR3IP_BOVIN Immediate early response 3-interacting protein 1 OS=Bos taurus GN=IER3IP1 PE=3 SV=1 6 83 2.0E-12
sp|P85007|IR3IP_RAT Immediate early response 3-interacting protein 1 OS=Rattus norvegicus GN=Ier3ip1 PE=3 SV=1 6 83 2.0E-12
sp|Q9CR20|IR3IP_MOUSE Immediate early response 3-interacting protein 1 OS=Mus musculus GN=Ier3ip1 PE=3 SV=1 6 83 2.0E-12
sp|Q3B8G7|IR3IP_XENLA Immediate early response 3-interacting protein 1 OS=Xenopus laevis GN=ier3ip1 PE=3 SV=1 6 83 4.0E-12
[Show less]

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane Transmembrane domain 0.2229 0.1075 0.1017 0.5404 0.1247 0.0062 0.5179 0.4192 0.3551 0.0114

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 2 21 19
2 63 82 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5998
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|2244
Ophiocordyceps camponoti-floridani Ophcf2|05101
Ophiocordyceps kimflemingae Ophio5|3219
Ophiocordyceps subramaniannii Hirsu2|10646 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10646
MLFFGNFLYIAVLLINSVAVLSEDRFLARINLSPASYDPAFGIGADASIKAKIIHLIASVRTIMRMPLIFVNTII
ILYELVLG*
Coding >Hirsu2|10646
ATGCTGTTCTTCGGCAACTTCCTCTACATCGCGGTGCTGCTCATCAACTCCGTCGCCGTCCTGAGCGAGGACCGC
TTCCTGGCGCGCATCAATCTGTCGCCCGCGTCCTACGACCCGGCCTTTGGCATCGGCGCCGACGCGAGCATCAAG
GCAAAGATCATACACCTCATTGCCAGCGTTCGCACCATCATGCGCATGCCGCTCATCTTCGTCAATACCATCATC
ATCCTCTACGAGCTTGTCCTTGGCTGA
Transcript >Hirsu2|10646
ATGCTGTTCTTCGGCAACTTCCTCTACATCGCGGTGCTGCTCATCAACTCCGTCGCCGTCCTGAGCGAGGACCGC
TTCCTGGCGCGCATCAATCTGTCGCCCGCGTCCTACGACCCGGCCTTTGGCATCGGCGCCGACGCGAGCATCAAG
GCAAAGATCATACACCTCATTGCCAGCGTTCGCACCATCATGCGCATGCCGCTCATCTTCGTCAATACCATCATC
ATCCTCTACGAGCTTGTCCTTGGCTGA
Gene >Hirsu2|10646
ATGCTGTTCTTCGGCAACTTCCTCTACATCGCGGTGCTGCTCATCAACTCCGTCGCCGTCCTGAGCGAGGACCGC
TTCCTGGCGCGCAGTACGCTGCTCCCCCCCTTTTTCCCCGCTCTGCCGCTTCCATGGCCCGACCCCGTCTGCTGC
GCGGCGCTGACAGCCGTGGAAAAATATAGTCAATCTGTCGCCCGCGTCCTACGACCCGGCCTTTGGCATCGGCGC
CGACGCGAGCATCAAGGCAAAGATCATACACCTCATTGCCAGCGTTCGCACCATCATGCGCAGTGCGTTGACCCT
GTTGGGGGTGGGGGGGAGGGAGACGGGCTGACGATGCGTGCAGTGCCGCTCATCTTCGTCAATACCATCATCATC
CTCTACGAGCTTGTCCTTGGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail