Protein ID | Hirsu2|10646 |
Gene name | |
Location | Contig_881:1098..1497 |
Strand | - |
Gene length (bp) | 399 |
Transcript length (bp) | 252 |
Coding sequence length (bp) | 252 |
Protein length (aa) | 84 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08571 | Yos1 | Yos1-like | 7.5E-34 | 4 | 83 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O13825|YOS1_SCHPO | Protein transport protein yos1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yos1 PE=3 SV=1 | 1 | 83 | 3.0E-22 |
sp|Q3E834|YOS1_YEAST | Protein transport protein YOS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOS1 PE=1 SV=1 | 4 | 83 | 4.0E-18 |
sp|Q4VBI2|IR3IP_DANRE | Immediate early response 3-interacting protein 1 OS=Danio rerio GN=ier3ip1 PE=3 SV=1 | 11 | 83 | 3.0E-13 |
sp|Q9Y5U9|IR3IP_HUMAN | Immediate early response 3-interacting protein 1 OS=Homo sapiens GN=IER3IP1 PE=1 SV=1 | 6 | 83 | 2.0E-12 |
sp|Q1JQC2|IR3IP_BOVIN | Immediate early response 3-interacting protein 1 OS=Bos taurus GN=IER3IP1 PE=3 SV=1 | 6 | 83 | 2.0E-12 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O13825|YOS1_SCHPO | Protein transport protein yos1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yos1 PE=3 SV=1 | 1 | 83 | 3.0E-22 |
sp|Q3E834|YOS1_YEAST | Protein transport protein YOS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOS1 PE=1 SV=1 | 4 | 83 | 4.0E-18 |
sp|Q4VBI2|IR3IP_DANRE | Immediate early response 3-interacting protein 1 OS=Danio rerio GN=ier3ip1 PE=3 SV=1 | 11 | 83 | 3.0E-13 |
sp|Q9Y5U9|IR3IP_HUMAN | Immediate early response 3-interacting protein 1 OS=Homo sapiens GN=IER3IP1 PE=1 SV=1 | 6 | 83 | 2.0E-12 |
sp|Q1JQC2|IR3IP_BOVIN | Immediate early response 3-interacting protein 1 OS=Bos taurus GN=IER3IP1 PE=3 SV=1 | 6 | 83 | 2.0E-12 |
sp|P85007|IR3IP_RAT | Immediate early response 3-interacting protein 1 OS=Rattus norvegicus GN=Ier3ip1 PE=3 SV=1 | 6 | 83 | 2.0E-12 |
sp|Q9CR20|IR3IP_MOUSE | Immediate early response 3-interacting protein 1 OS=Mus musculus GN=Ier3ip1 PE=3 SV=1 | 6 | 83 | 2.0E-12 |
sp|Q3B8G7|IR3IP_XENLA | Immediate early response 3-interacting protein 1 OS=Xenopus laevis GN=ier3ip1 PE=3 SV=1 | 6 | 83 | 4.0E-12 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cell membrane | Transmembrane domain | 0.2229 | 0.1075 | 0.1017 | 0.5404 | 0.1247 | 0.0062 | 0.5179 | 0.4192 | 0.3551 | 0.0114 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 2 | 21 | 19 |
2 | 63 | 82 | 19 |
Orthofinder run ID | 4 |
Orthogroup | 5998 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10646 MLFFGNFLYIAVLLINSVAVLSEDRFLARINLSPASYDPAFGIGADASIKAKIIHLIASVRTIMRMPLIFVNTII ILYELVLG* |
Coding | >Hirsu2|10646 ATGCTGTTCTTCGGCAACTTCCTCTACATCGCGGTGCTGCTCATCAACTCCGTCGCCGTCCTGAGCGAGGACCGC TTCCTGGCGCGCATCAATCTGTCGCCCGCGTCCTACGACCCGGCCTTTGGCATCGGCGCCGACGCGAGCATCAAG GCAAAGATCATACACCTCATTGCCAGCGTTCGCACCATCATGCGCATGCCGCTCATCTTCGTCAATACCATCATC ATCCTCTACGAGCTTGTCCTTGGCTGA |
Transcript | >Hirsu2|10646 ATGCTGTTCTTCGGCAACTTCCTCTACATCGCGGTGCTGCTCATCAACTCCGTCGCCGTCCTGAGCGAGGACCGC TTCCTGGCGCGCATCAATCTGTCGCCCGCGTCCTACGACCCGGCCTTTGGCATCGGCGCCGACGCGAGCATCAAG GCAAAGATCATACACCTCATTGCCAGCGTTCGCACCATCATGCGCATGCCGCTCATCTTCGTCAATACCATCATC ATCCTCTACGAGCTTGTCCTTGGCTGA |
Gene | >Hirsu2|10646 ATGCTGTTCTTCGGCAACTTCCTCTACATCGCGGTGCTGCTCATCAACTCCGTCGCCGTCCTGAGCGAGGACCGC TTCCTGGCGCGCAGTACGCTGCTCCCCCCCTTTTTCCCCGCTCTGCCGCTTCCATGGCCCGACCCCGTCTGCTGC GCGGCGCTGACAGCCGTGGAAAAATATAGTCAATCTGTCGCCCGCGTCCTACGACCCGGCCTTTGGCATCGGCGC CGACGCGAGCATCAAGGCAAAGATCATACACCTCATTGCCAGCGTTCGCACCATCATGCGCAGTGCGTTGACCCT GTTGGGGGTGGGGGGGAGGGAGACGGGCTGACGATGCGTGCAGTGCCGCTCATCTTCGTCAATACCATCATCATC CTCTACGAGCTTGTCCTTGGCTGA |