Protein ID | Hirsu2|10638 |
Gene name | |
Location | Contig_88:33881..35045 |
Strand | + |
Gene length (bp) | 1164 |
Transcript length (bp) | 1164 |
Coding sequence length (bp) | 1164 |
Protein length (aa) | 388 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1533 | 0.1014 | 0.944 | 0.0726 | 0.0567 | 0.0094 | 0.1332 | 0.1095 | 0.1026 | 0.0029 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 16 | 0.999714 |
Orthofinder run ID | 4 |
Orthogroup | 108 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10638 MRLLTLILVSLVGVYAAPVVESHRGLDKRDSQEEPDGIRGFMRARLAAQYEMADKSMPGYLFRGDNRPHLDIFAH GFGPQGRDMSLNRHLSFNGGSGYVSVTRSRTQAGLYAFGRSSFRTQRGYVYVIDPNAVPHMNGYWIPERFPNDGA VRRNQEFAVAGIVPNTAIVGAYEFPSGTVDSARWIDNPSFAPTGTPAYSPDADSCTRGVCRRLTHLLQWACEAAA TCFTPADPPLEPEPASGIDNQACVIDEQPSCHNGPIDLAAITPDIAEDLRERRYDNIACTALLGLVLGASKQNRP RRSLIELARRGEREEYPHASCFSRRPEDRDCEELRAMVVPKHRKRPDPDAYLDNDKEQPNQLESQMQRPPTESGD REYLRTNRVPRD* |
Coding | >Hirsu2|10638 ATGCGCCTCCTTACTCTGATACTCGTGTCGCTTGTCGGCGTCTATGCCGCACCAGTAGTCGAGTCCCACCGTGGT CTCGACAAGCGCGACTCGCAGGAGGAGCCAGATGGGATTCGCGGGTTCATGCGCGCCCGCCTGGCGGCCCAGTAT GAGATGGCGGACAAGAGCATGCCCGGATACCTCTTCCGCGGCGACAACCGGCCCCACTTGGACATCTTCGCCCAC GGCTTCGGCCCCCAGGGCCGGGACATGAGCCTCAACCGGCACCTCAGCTTCAACGGCGGCTCCGGGTACGTCTCC GTGACGCGGTCGCGGACCCAGGCCGGGCTTTACGCCTTCGGCCGGTCATCCTTCCGGACCCAAAGAGGCTACGTC TACGTCATCGACCCGAACGCCGTGCCGCACATGAACGGATACTGGATACCTGAGAGGTTCCCCAACGACGGGGCT GTGCGGCGGAACCAGGAGTTCGCGGTGGCCGGCATCGTCCCCAACACGGCCATCGTCGGCGCCTACGAGTTCCCC AGCGGAACCGTCGACTCGGCCCGCTGGATCGACAACCCGAGCTTCGCTCCCACCGGCACGCCTGCGTACTCGCCC GATGCCGATTCGTGCACGAGAGGCGTCTGCCGCAGGCTCACGCACCTCCTGCAGTGGGCCTGCGAAGCGGCGGCC ACGTGCTTCACGCCGGCAGACCCGCCGCTGGAGCCCGAGCCGGCCAGCGGCATAGATAATCAAGCTTGTGTCATC GACGAGCAGCCGAGTTGCCACAACGGGCCCATCGACCTCGCGGCCATAACGCCCGACATAGCAGAGGATCTGAGA GAGAGGCGATATGACAACATCGCCTGCACCGCCCTGCTTGGCCTGGTCTTGGGAGCCTCCAAACAGAACCGTCCG AGAAGATCGCTGATCGAGCTCGCGCGGAGGGGAGAGAGGGAAGAGTACCCGCACGCCTCTTGCTTCTCCCGCAGG CCGGAGGACAGGGATTGCGAAGAGCTCCGGGCCATGGTGGTGCCCAAGCACCGCAAGAGGCCGGACCCCGATGCC TACTTGGACAACGACAAGGAGCAGCCAAACCAGTTGGAATCGCAGATGCAACGGCCACCCACTGAGTCGGGAGAC CGGGAGTATTTGAGGACGAACCGAGTTCCCCGTGATTGA |
Transcript | >Hirsu2|10638 ATGCGCCTCCTTACTCTGATACTCGTGTCGCTTGTCGGCGTCTATGCCGCACCAGTAGTCGAGTCCCACCGTGGT CTCGACAAGCGCGACTCGCAGGAGGAGCCAGATGGGATTCGCGGGTTCATGCGCGCCCGCCTGGCGGCCCAGTAT GAGATGGCGGACAAGAGCATGCCCGGATACCTCTTCCGCGGCGACAACCGGCCCCACTTGGACATCTTCGCCCAC GGCTTCGGCCCCCAGGGCCGGGACATGAGCCTCAACCGGCACCTCAGCTTCAACGGCGGCTCCGGGTACGTCTCC GTGACGCGGTCGCGGACCCAGGCCGGGCTTTACGCCTTCGGCCGGTCATCCTTCCGGACCCAAAGAGGCTACGTC TACGTCATCGACCCGAACGCCGTGCCGCACATGAACGGATACTGGATACCTGAGAGGTTCCCCAACGACGGGGCT GTGCGGCGGAACCAGGAGTTCGCGGTGGCCGGCATCGTCCCCAACACGGCCATCGTCGGCGCCTACGAGTTCCCC AGCGGAACCGTCGACTCGGCCCGCTGGATCGACAACCCGAGCTTCGCTCCCACCGGCACGCCTGCGTACTCGCCC GATGCCGATTCGTGCACGAGAGGCGTCTGCCGCAGGCTCACGCACCTCCTGCAGTGGGCCTGCGAAGCGGCGGCC ACGTGCTTCACGCCGGCAGACCCGCCGCTGGAGCCCGAGCCGGCCAGCGGCATAGATAATCAAGCTTGTGTCATC GACGAGCAGCCGAGTTGCCACAACGGGCCCATCGACCTCGCGGCCATAACGCCCGACATAGCAGAGGATCTGAGA GAGAGGCGATATGACAACATCGCCTGCACCGCCCTGCTTGGCCTGGTCTTGGGAGCCTCCAAACAGAACCGTCCG AGAAGATCGCTGATCGAGCTCGCGCGGAGGGGAGAGAGGGAAGAGTACCCGCACGCCTCTTGCTTCTCCCGCAGG CCGGAGGACAGGGATTGCGAAGAGCTCCGGGCCATGGTGGTGCCCAAGCACCGCAAGAGGCCGGACCCCGATGCC TACTTGGACAACGACAAGGAGCAGCCAAACCAGTTGGAATCGCAGATGCAACGGCCACCCACTGAGTCGGGAGAC CGGGAGTATTTGAGGACGAACCGAGTTCCCCGTGATTGA |
Gene | >Hirsu2|10638 ATGCGCCTCCTTACTCTGATACTCGTGTCGCTTGTCGGCGTCTATGCCGCACCAGTAGTCGAGTCCCACCGTGGT CTCGACAAGCGCGACTCGCAGGAGGAGCCAGATGGGATTCGCGGGTTCATGCGCGCCCGCCTGGCGGCCCAGTAT GAGATGGCGGACAAGAGCATGCCCGGATACCTCTTCCGCGGCGACAACCGGCCCCACTTGGACATCTTCGCCCAC GGCTTCGGCCCCCAGGGCCGGGACATGAGCCTCAACCGGCACCTCAGCTTCAACGGCGGCTCCGGGTACGTCTCC GTGACGCGGTCGCGGACCCAGGCCGGGCTTTACGCCTTCGGCCGGTCATCCTTCCGGACCCAAAGAGGCTACGTC TACGTCATCGACCCGAACGCCGTGCCGCACATGAACGGATACTGGATACCTGAGAGGTTCCCCAACGACGGGGCT GTGCGGCGGAACCAGGAGTTCGCGGTGGCCGGCATCGTCCCCAACACGGCCATCGTCGGCGCCTACGAGTTCCCC AGCGGAACCGTCGACTCGGCCCGCTGGATCGACAACCCGAGCTTCGCTCCCACCGGCACGCCTGCGTACTCGCCC GATGCCGATTCGTGCACGAGAGGCGTCTGCCGCAGGCTCACGCACCTCCTGCAGTGGGCCTGCGAAGCGGCGGCC ACGTGCTTCACGCCGGCAGACCCGCCGCTGGAGCCCGAGCCGGCCAGCGGCATAGATAATCAAGCTTGTGTCATC GACGAGCAGCCGAGTTGCCACAACGGGCCCATCGACCTCGCGGCCATAACGCCCGACATAGCAGAGGATCTGAGA GAGAGGCGATATGACAACATCGCCTGCACCGCCCTGCTTGGCCTGGTCTTGGGAGCCTCCAAACAGAACCGTCCG AGAAGATCGCTGATCGAGCTCGCGCGGAGGGGAGAGAGGGAAGAGTACCCGCACGCCTCTTGCTTCTCCCGCAGG CCGGAGGACAGGGATTGCGAAGAGCTCCGGGCCATGGTGGTGCCCAAGCACCGCAAGAGGCCGGACCCCGATGCC TACTTGGACAACGACAAGGAGCAGCCAAACCAGTTGGAATCGCAGATGCAACGGCCACCCACTGAGTCGGGAGAC CGGGAGTATTTGAGGACGAACCGAGTTCCCCGTGATTGA |