© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1063 |
| Gene name | |
| Location | Contig_122:15699..17421 |
| Strand | + |
| Gene length (bp) | 1722 |
| Transcript length (bp) | 1722 |
| Coding sequence length (bp) | 1722 |
| Protein length (aa) | 574 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.2295 | 0.8162 | 0.1073 | 0.0156 | 0.0475 | 0.0197 | 0.0806 | 0.0076 | 0.0101 | 0.0009 |
| Orthofinder run ID | 4 |
| Orthogroup | 1307 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1063 MLAEAAPSSSAPSAITPTGSHGDYVRLHITPLDAELVRIIIPASLQARARNVSFHTIETFPEKRYGFVDLPSMDA EKLTKKLNGSLLKGNKVRIEKARPEATFEPAGDAERADKKRKKKNDGASSTKRQKKDPNVLEGFALRERKVKRGW TESADTKRRSKKSKDRDGRNKEKEKRKRPRSKYTDQEECLLKVKLPPNAMGNLAQADVDIKPKKSKSRKVTVHEF EKTTKFPSFLKHAVSESSGKPAKEFVEGKGWVDEDGNVVETVRTTRPSAQLAKPDAPRDTPEIEEGSDADKDSNV EDNSDDSTSSSGTSSEEEDSEDEEDEEEQSDAHNTVKDERRKQPATAHGRQSPEAQVKPIKGAEHTTPSSILKSG GARPPSSSSSKSLKISIPPPPPLPPMTPSASTIHPLEALYKRPKPEGANATDTPARQPEPFSFFGGGSEEDEAEA EEEAAPQKPGVAMPMTPFSRQDFERRNVRSAAPTPDTAHPTRMRNFWAPAQQQQQEEEEDDEEEETGKMAAGGGD GKPPEQTDFQTWFWDNRRELNRSWMSRRKTAAKEKRHRENKARASKAV* |
| Coding | >Hirsu2|1063 ATGCTCGCCGAAGCTGCACCATCGTCCTCTGCTCCGTCCGCCATCACGCCCACGGGAAGCCACGGTGACTACGTG CGCCTGCACATCACGCCTCTGGACGCGGAGCTGGTCAGGATCATCATCCCGGCCTCGCTGCAGGCACGGGCCCGC AACGTATCCTTCCACACGATCGAGACGTTCCCCGAGAAGCGCTACGGATTCGTCGACTTGCCCTCCATGGACGCT GAGAAGCTGACCAAGAAGCTCAATGGCTCTCTCCTGAAGGGCAACAAGGTGCGCATCGAGAAGGCTCGGCCGGAG GCGACCTTTGAGCCGGCAGGGGATGCGGAAAGGGCCGACAAGAAACGAAAGAAGAAGAACGATGGGGCGTCCAGT ACGAAGAGGCAGAAGAAAGATCCCAATGTTCTGGAGGGCTTCGCCCTCAGAGAGCGCAAGGTGAAGCGAGGCTGG ACCGAGTCGGCTGACACGAAAAGGAGGAGCAAGAAGAGCAAGGACAGGGACGGCAGAAATAAAGAGAAGGAGAAG CGGAAGCGCCCAAGGTCTAAATACACCGACCAAGAGGAATGCCTCCTCAAGGTCAAGCTCCCCCCCAACGCCATG GGCAACCTGGCGCAGGCCGACGTCGACATAAAACCCAAAAAGAGCAAGTCGCGGAAAGTGACGGTCCATGAGTTT GAGAAGACGACCAAGTTCCCCAGCTTCCTGAAGCATGCCGTGTCGGAATCCAGTGGGAAGCCGGCGAAGGAGTTC GTGGAAGGCAAGGGCTGGGTCGACGAAGATGGCAATGTGGTTGAGACGGTGCGGACGACGAGGCCGTCGGCTCAG CTCGCAAAACCGGACGCGCCAAGAGACACTCCCGAAATCGAGGAAGGATCCGACGCTGATAAAGACTCCAACGTC GAAGACAATTCAGACGACAGCACAAGCAGCAGCGGCACGTCGTCCGAGGAGGAGGATTCCGAAGACGAGGAGGAT GAGGAAGAACAGTCTGATGCTCACAATACCGTCAAAGACGAGCGCAGGAAGCAGCCTGCCACGGCACACGGGCGC CAGAGCCCAGAAGCTCAGGTCAAGCCGATCAAAGGCGCGGAACACACAACGCCATCCTCCATCCTCAAATCTGGT GGGGCGAGACCACCATCAAGCAGCTCATCAAAAAGTCTGAAGATCAGCATTCCGCCGCCGCCGCCGCTACCACCG ATGACGCCCTCGGCATCCACCATCCACCCGCTGGAAGCACTCTACAAGCGGCCAAAACCAGAGGGTGCCAATGCG ACAGATACCCCAGCACGGCAGCCGGAGCCGTTCAGCTTCTTCGGGGGAGGTTCCGAGGAGGACGAGGCAGAGGCA GAAGAAGAGGCAGCGCCGCAGAAGCCGGGCGTGGCGATGCCAATGACGCCCTTCTCCCGACAGGATTTCGAGCGG CGCAACGTGCGGAGCGCGGCGCCGACTCCGGACACGGCGCACCCGACGCGAATGCGCAACTTCTGGGCGCCGGCG CAGCAGCAACAGCAGGAGGAGGAGGAGGATGATGAGGAGGAGGAGACGGGGAAGATGGCGGCGGGCGGAGGCGAC GGCAAGCCGCCGGAGCAGACCGACTTCCAGACCTGGTTCTGGGACAACCGCAGGGAACTGAACCGGTCGTGGATG TCGCGGCGGAAGACGGCCGCCAAGGAGAAGCGACACCGGGAGAACAAGGCGAGGGCGTCCAAGGCGGTATAG |
| Transcript | >Hirsu2|1063 ATGCTCGCCGAAGCTGCACCATCGTCCTCTGCTCCGTCCGCCATCACGCCCACGGGAAGCCACGGTGACTACGTG CGCCTGCACATCACGCCTCTGGACGCGGAGCTGGTCAGGATCATCATCCCGGCCTCGCTGCAGGCACGGGCCCGC AACGTATCCTTCCACACGATCGAGACGTTCCCCGAGAAGCGCTACGGATTCGTCGACTTGCCCTCCATGGACGCT GAGAAGCTGACCAAGAAGCTCAATGGCTCTCTCCTGAAGGGCAACAAGGTGCGCATCGAGAAGGCTCGGCCGGAG GCGACCTTTGAGCCGGCAGGGGATGCGGAAAGGGCCGACAAGAAACGAAAGAAGAAGAACGATGGGGCGTCCAGT ACGAAGAGGCAGAAGAAAGATCCCAATGTTCTGGAGGGCTTCGCCCTCAGAGAGCGCAAGGTGAAGCGAGGCTGG ACCGAGTCGGCTGACACGAAAAGGAGGAGCAAGAAGAGCAAGGACAGGGACGGCAGAAATAAAGAGAAGGAGAAG CGGAAGCGCCCAAGGTCTAAATACACCGACCAAGAGGAATGCCTCCTCAAGGTCAAGCTCCCCCCCAACGCCATG GGCAACCTGGCGCAGGCCGACGTCGACATAAAACCCAAAAAGAGCAAGTCGCGGAAAGTGACGGTCCATGAGTTT GAGAAGACGACCAAGTTCCCCAGCTTCCTGAAGCATGCCGTGTCGGAATCCAGTGGGAAGCCGGCGAAGGAGTTC GTGGAAGGCAAGGGCTGGGTCGACGAAGATGGCAATGTGGTTGAGACGGTGCGGACGACGAGGCCGTCGGCTCAG CTCGCAAAACCGGACGCGCCAAGAGACACTCCCGAAATCGAGGAAGGATCCGACGCTGATAAAGACTCCAACGTC GAAGACAATTCAGACGACAGCACAAGCAGCAGCGGCACGTCGTCCGAGGAGGAGGATTCCGAAGACGAGGAGGAT GAGGAAGAACAGTCTGATGCTCACAATACCGTCAAAGACGAGCGCAGGAAGCAGCCTGCCACGGCACACGGGCGC CAGAGCCCAGAAGCTCAGGTCAAGCCGATCAAAGGCGCGGAACACACAACGCCATCCTCCATCCTCAAATCTGGT GGGGCGAGACCACCATCAAGCAGCTCATCAAAAAGTCTGAAGATCAGCATTCCGCCGCCGCCGCCGCTACCACCG ATGACGCCCTCGGCATCCACCATCCACCCGCTGGAAGCACTCTACAAGCGGCCAAAACCAGAGGGTGCCAATGCG ACAGATACCCCAGCACGGCAGCCGGAGCCGTTCAGCTTCTTCGGGGGAGGTTCCGAGGAGGACGAGGCAGAGGCA GAAGAAGAGGCAGCGCCGCAGAAGCCGGGCGTGGCGATGCCAATGACGCCCTTCTCCCGACAGGATTTCGAGCGG CGCAACGTGCGGAGCGCGGCGCCGACTCCGGACACGGCGCACCCGACGCGAATGCGCAACTTCTGGGCGCCGGCG CAGCAGCAACAGCAGGAGGAGGAGGAGGATGATGAGGAGGAGGAGACGGGGAAGATGGCGGCGGGCGGAGGCGAC GGCAAGCCGCCGGAGCAGACCGACTTCCAGACCTGGTTCTGGGACAACCGCAGGGAACTGAACCGGTCGTGGATG TCGCGGCGGAAGACGGCCGCCAAGGAGAAGCGACACCGGGAGAACAAGGCGAGGGCGTCCAAGGCGGTATAG |
| Gene | >Hirsu2|1063 ATGCTCGCCGAAGCTGCACCATCGTCCTCTGCTCCGTCCGCCATCACGCCCACGGGAAGCCACGGTGACTACGTG CGCCTGCACATCACGCCTCTGGACGCGGAGCTGGTCAGGATCATCATCCCGGCCTCGCTGCAGGCACGGGCCCGC AACGTATCCTTCCACACGATCGAGACGTTCCCCGAGAAGCGCTACGGATTCGTCGACTTGCCCTCCATGGACGCT GAGAAGCTGACCAAGAAGCTCAATGGCTCTCTCCTGAAGGGCAACAAGGTGCGCATCGAGAAGGCTCGGCCGGAG GCGACCTTTGAGCCGGCAGGGGATGCGGAAAGGGCCGACAAGAAACGAAAGAAGAAGAACGATGGGGCGTCCAGT ACGAAGAGGCAGAAGAAAGATCCCAATGTTCTGGAGGGCTTCGCCCTCAGAGAGCGCAAGGTGAAGCGAGGCTGG ACCGAGTCGGCTGACACGAAAAGGAGGAGCAAGAAGAGCAAGGACAGGGACGGCAGAAATAAAGAGAAGGAGAAG CGGAAGCGCCCAAGGTCTAAATACACCGACCAAGAGGAATGCCTCCTCAAGGTCAAGCTCCCCCCCAACGCCATG GGCAACCTGGCGCAGGCCGACGTCGACATAAAACCCAAAAAGAGCAAGTCGCGGAAAGTGACGGTCCATGAGTTT GAGAAGACGACCAAGTTCCCCAGCTTCCTGAAGCATGCCGTGTCGGAATCCAGTGGGAAGCCGGCGAAGGAGTTC GTGGAAGGCAAGGGCTGGGTCGACGAAGATGGCAATGTGGTTGAGACGGTGCGGACGACGAGGCCGTCGGCTCAG CTCGCAAAACCGGACGCGCCAAGAGACACTCCCGAAATCGAGGAAGGATCCGACGCTGATAAAGACTCCAACGTC GAAGACAATTCAGACGACAGCACAAGCAGCAGCGGCACGTCGTCCGAGGAGGAGGATTCCGAAGACGAGGAGGAT GAGGAAGAACAGTCTGATGCTCACAATACCGTCAAAGACGAGCGCAGGAAGCAGCCTGCCACGGCACACGGGCGC CAGAGCCCAGAAGCTCAGGTCAAGCCGATCAAAGGCGCGGAACACACAACGCCATCCTCCATCCTCAAATCTGGT GGGGCGAGACCACCATCAAGCAGCTCATCAAAAAGTCTGAAGATCAGCATTCCGCCGCCGCCGCCGCTACCACCG ATGACGCCCTCGGCATCCACCATCCACCCGCTGGAAGCACTCTACAAGCGGCCAAAACCAGAGGGTGCCAATGCG ACAGATACCCCAGCACGGCAGCCGGAGCCGTTCAGCTTCTTCGGGGGAGGTTCCGAGGAGGACGAGGCAGAGGCA GAAGAAGAGGCAGCGCCGCAGAAGCCGGGCGTGGCGATGCCAATGACGCCCTTCTCCCGACAGGATTTCGAGCGG CGCAACGTGCGGAGCGCGGCGCCGACTCCGGACACGGCGCACCCGACGCGAATGCGCAACTTCTGGGCGCCGGCG CAGCAGCAACAGCAGGAGGAGGAGGAGGATGATGAGGAGGAGGAGACGGGGAAGATGGCGGCGGGCGGAGGCGAC GGCAAGCCGCCGGAGCAGACCGACTTCCAGACCTGGTTCTGGGACAACCGCAGGGAACTGAACCGGTCGTGGATG TCGCGGCGGAAGACGGCCGCCAAGGAGAAGCGACACCGGGAGAACAAGGCGAGGGCGTCCAAGGCGGTATAG |