© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10629 |
| Gene name | |
| Location | Contig_88:6409..7757 |
| Strand | + |
| Gene length (bp) | 1348 |
| Transcript length (bp) | 1137 |
| Coding sequence length (bp) | 1137 |
| Protein length (aa) | 379 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01758 | SBF | Sodium Bile acid symporter family | 6.8E-53 | 85 | 280 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8NQC8|ACR3_CORGL | Arsenical-resistance protein Acr3 OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=acr3 PE=1 SV=2 | 22 | 374 | 9.0E-100 |
| sp|P45946|ARSB_BACSU | Arsenite resistance protein ArsB OS=Bacillus subtilis (strain 168) GN=arsB PE=3 SV=2 | 38 | 375 | 2.0E-95 |
| sp|Q06598|ARR3_YEAST | Arsenical-resistance protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ARR3 PE=1 SV=1 | 64 | 378 | 1.0E-74 |
| sp|P74311|Y944_SYNY3 | Uncharacterized transporter slr0944 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0944 PE=3 SV=1 | 30 | 369 | 8.0E-49 |
| sp|A6TP80|ACR3_ALKMQ | Arsenical-resistance protein Acr3 OS=Alkaliphilus metalliredigens (strain QYMF) GN=acr3 PE=1 SV=1 | 38 | 350 | 7.0E-39 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 63 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 46 | 65 | 19 |
| 2 | 75 | 97 | 22 |
| 3 | 117 | 139 | 22 |
| 4 | 149 | 171 | 22 |
| 5 | 178 | 200 | 22 |
| 6 | 215 | 237 | 22 |
| 7 | 250 | 272 | 22 |
| 8 | 285 | 307 | 22 |
| 9 | 314 | 336 | 22 |
| 10 | 346 | 368 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10629 MHATTPPAPTEHNGNGQPDPENQTTDRSKGPVSVSAFRHLGFLDRYLAVWIFLAMAIGIILGNFVPETGPSLQKG KFVGVSAPIAVGLLVMMYPILCKVRYESLHELLSQRGMWKQICFSLVVNWILAPFLMLGLAWAFLPDRSDLRIGL ILVGVGRCIAMVLVWNGLAGGDDEYCAILVAINSLLQTVLFAPVAVFFIGTISGESGSLDISYQVVATSVAVFLG IPLGAAVVTRLVLRAVAGHPWYQGVFLPFVSPWSLIGLLYTILVLFASQGRQVAHQVVSVLRVAAPLLVYFVLVF VVTLWAGRILGFRFSLMVTQGFTAASNNFELAIAVAVATFGPDSDQALASTVGPLIEVPVLVGLVYTVRWLANRW NWK* |
| Coding | >Hirsu2|10629 ATGCACGCCACGACACCTCCGGCTCCAACGGAGCACAATGGCAACGGTCAACCAGACCCCGAGAACCAGACCACC GATCGCAGCAAGGGCCCTGTGTCAGTATCTGCATTCAGGCACCTGGGCTTTCTCGACCGTTACCTCGCAGTCTGG ATCTTCTTGGCGATGGCCATCGGCATCATTCTCGGTAATTTTGTCCCGGAGACGGGCCCATCCTTGCAGAAGGGC AAATTTGTGGGTGTTTCGGCGCCAATTGCTGTCGGTTTGCTCGTCATGATGTACCCCATTCTTTGCAAGGTCCGC TACGAATCGCTGCACGAACTCCTGTCGCAAAGGGGGATGTGGAAGCAGATTTGCTTCAGCCTGGTTGTCAACTGG ATTCTTGCGCCCTTTCTCATGCTTGGCCTCGCCTGGGCTTTCCTCCCAGACAGGAGCGATCTTCGCATCGGCCTC ATCCTCGTCGGAGTCGGGAGATGTATTGCCATGGTTCTTGTCTGGAATGGCCTTGCCGGCGGAGACGACGAGTAT TGCGCCATTCTCGTCGCCATCAACTCGCTGCTGCAAACGGTCCTCTTCGCGCCGGTTGCCGTCTTCTTCATCGGC ACCATCAGCGGGGAGTCAGGCTCCCTCGACATCTCCTACCAAGTTGTGGCCACCAGCGTGGCCGTCTTTCTCGGC ATCCCGCTCGGAGCCGCCGTCGTGACGAGACTTGTACTCCGAGCGGTGGCTGGGCATCCCTGGTACCAGGGCGTC TTCCTCCCATTCGTCTCGCCCTGGTCCCTCATTGGCCTGCTATATACCATTCTTGTCCTCTTCGCCTCCCAAGGT CGCCAGGTCGCCCACCAAGTCGTGTCCGTGCTCCGTGTCGCTGCACCGCTCCTGGTGTATTTCGTCCTTGTCTTC GTCGTTACCCTCTGGGCCGGCCGAATACTTGGCTTCAGGTTCTCTCTCATGGTCACGCAAGGTTTCACCGCCGCC AGCAACAACTTCGAGCTTGCTATTGCCGTTGCCGTGGCCACATTCGGACCCGACAGCGATCAGGCATTGGCATCT ACCGTCGGCCCGCTCATTGAGGTGCCCGTCCTAGTTGGCTTGGTATATACAGTTCGATGGCTGGCCAACAGGTGG AACTGGAAGTGA |
| Transcript | >Hirsu2|10629 ATGCACGCCACGACACCTCCGGCTCCAACGGAGCACAATGGCAACGGTCAACCAGACCCCGAGAACCAGACCACC GATCGCAGCAAGGGCCCTGTGTCAGTATCTGCATTCAGGCACCTGGGCTTTCTCGACCGTTACCTCGCAGTCTGG ATCTTCTTGGCGATGGCCATCGGCATCATTCTCGGTAATTTTGTCCCGGAGACGGGCCCATCCTTGCAGAAGGGC AAATTTGTGGGTGTTTCGGCGCCAATTGCTGTCGGTTTGCTCGTCATGATGTACCCCATTCTTTGCAAGGTCCGC TACGAATCGCTGCACGAACTCCTGTCGCAAAGGGGGATGTGGAAGCAGATTTGCTTCAGCCTGGTTGTCAACTGG ATTCTTGCGCCCTTTCTCATGCTTGGCCTCGCCTGGGCTTTCCTCCCAGACAGGAGCGATCTTCGCATCGGCCTC ATCCTCGTCGGAGTCGGGAGATGTATTGCCATGGTTCTTGTCTGGAATGGCCTTGCCGGCGGAGACGACGAGTAT TGCGCCATTCTCGTCGCCATCAACTCGCTGCTGCAAACGGTCCTCTTCGCGCCGGTTGCCGTCTTCTTCATCGGC ACCATCAGCGGGGAGTCAGGCTCCCTCGACATCTCCTACCAAGTTGTGGCCACCAGCGTGGCCGTCTTTCTCGGC ATCCCGCTCGGAGCCGCCGTCGTGACGAGACTTGTACTCCGAGCGGTGGCTGGGCATCCCTGGTACCAGGGCGTC TTCCTCCCATTCGTCTCGCCCTGGTCCCTCATTGGCCTGCTATATACCATTCTTGTCCTCTTCGCCTCCCAAGGT CGCCAGGTCGCCCACCAAGTCGTGTCCGTGCTCCGTGTCGCTGCACCGCTCCTGGTGTATTTCGTCCTTGTCTTC GTCGTTACCCTCTGGGCCGGCCGAATACTTGGCTTCAGGTTCTCTCTCATGGTCACGCAAGGTTTCACCGCCGCC AGCAACAACTTCGAGCTTGCTATTGCCGTTGCCGTGGCCACATTCGGACCCGACAGCGATCAGGCATTGGCATCT ACCGTCGGCCCGCTCATTGAGGTGCCCGTCCTAGTTGGCTTGGTATATACAGTTCGATGGCTGGCCAACAGGTGG AACTGGAAGTGA |
| Gene | >Hirsu2|10629 ATGCACGCCACGACACCTCCGGCTCCAACGGAGCACAATGGCAACGGTCAACCAGACCCCGAGAACCAGACCACC GATCGCAGCAAGGGCCCTGTGTCAGTATCTGCATTCAGGCACCTGGGCTTTCTCGACCGTTACCTCGCAGTCTGG ATCTTCTTGGCGATGGCCATCGGCATCATTCTCGGTAATTTTGTCCCGGAGACGGGCCCATCCTTGCAGAAGGGC AAATTTGTGGGTGTTTCGGCGCCAATTGGTATGTCCATGTCTCGACGTCGGCTGGCAAACTCGAACGGGGGGCAG GACCTCGGGCTGATAGAAGCGTTCTTTCATTGACGCCAGCTGTCGGTTTGCTCGTCATGATGTACCCCATTCTTT GCAAGGTCCGCTACGAATCGCTGCACGAACTCCTGTCGCAAAGGGGGATGTGGAAGCAGATTTGCTTCAGCCTGG TTGTCAACTGGATTCTTGCGCCCTTTCTCATGGTAAGTCTGTAGGGAGAACGGTGAGGAGACAACAGTCACGGCC AACCTTTTCTGCACCAGCTTGGCCTCGCCTGGGCTTTCCTCCCAGACAGGAGCGATCTTCGCATCGGCCTCATCC TCGTCGGAGTCGGGAGATGTATTGCCATGGTCAGGACGCTTTCTCCCTCCCGAGCCCCTTTAAGTGGTCGATGCT GACACGGTTGCTCCCACAGGTTCTTGTCTGGAATGGCCTTGCCGGCGGAGACGACGAGTATTGCGCCATTCTCGT CGCCATCAACTCGCTGCTGCAAACGGTCCTCTTCGCGCCGGTTGCCGTCTTCTTCATCGGCACCATCAGCGGGGA GTCAGGCTCCCTCGACATCTCCTACCAAGTTGTGGCCACCAGCGTGGCCGTCTTTCTCGGCATCCCGCTCGGAGC CGCCGTCGTGACGAGACTTGTACTCCGAGCGGTGGCTGGGCATCCCTGGTACCAGGGCGTCTTCCTCCCATTCGT CTCGCCCTGGTCCCTCATTGGCCTGCTATATACCATTCTTGTCCTCTTCGCCTCCCAAGGTCGCCAGGTCGCCCA CCAAGTCGTGTCCGTGCTCCGTGTCGCTGCACCGCTCCTGGTGTATTTCGTCCTTGTCTTCGTCGTTACCCTCTG GGCCGGCCGAATACTTGGCTTCAGGTTCTCTCTCATGGTCACGCAAGGTTTCACCGCCGCCAGCAACAACTTCGA GCTTGCTATTGCCGTTGCCGTGGCCACATTCGGACCCGACAGCGATCAGGCATTGGCATCTACCGTCGGCCCGCT CATTGAGGTGCCCGTCCTAGTTGGCTTGGTATATACAGTTCGATGGCTGGCCAACAGGTGGAACTGGAAGTGA |