© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10622 |
| Gene name | |
| Location | Contig_879:115..1205 |
| Strand | + |
| Gene length (bp) | 1090 |
| Transcript length (bp) | 1023 |
| Coding sequence length (bp) | 1023 |
| Protein length (aa) | 341 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 44 | 66 | 22 |
| 3 | 86 | 108 | 22 |
| 4 | 121 | 143 | 22 |
| 5 | 163 | 185 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10622 MVPSTPQTTVGATLTYAISISFSKLSILAFYLRVSPDQNFRRAVYLLIGVVCAYTVSYILVIVFRCQPLAAGWDL AVKGRCIDYLVPMMVLSIANILIDLVILCLPIKVIVPLQIPTRQKLSLVFLFATGGFVCAAAIKRTIIMPPLLAS TDYAWDLPEQFVWSFVEVNAGVVCASLAALKPLFMRYIPFLIVSRLRSSQERSTAPDSSAPGTDKNASSSTHTTV YGEALELPSREDLPAPTVVGHRDRDASDDEAQLWSHGRKPASSLNSDSNRNDADSVDGLGGAGGGGGHGGAGGGD LYPGARPPRFTVSGSGYGMAGPRSPDAIQVTKETLVSYGK* |
| Coding | >Hirsu2|10622 ATGGTGCCCTCAACGCCGCAGACAACGGTCGGCGCAACGCTCACCTACGCCATCTCCATCTCCTTCTCCAAGCTG TCGATCCTGGCCTTCTACCTGCGCGTCTCGCCCGACCAGAACTTCCGGCGCGCCGTCTACCTGCTGATCGGCGTC GTCTGCGCCTACACCGTCTCGTATATACTCGTCATCGTCTTCCGCTGTCAGCCCCTGGCCGCCGGCTGGGACCTG GCCGTCAAGGGCCGCTGCATCGACTACCTGGTCCCCATGATGGTCCTCAGCATCGCCAACATCCTCATCGACCTC GTCATCCTGTGCCTGCCTATCAAGGTCATCGTGCCGCTGCAGATCCCCACGCGGCAGAAGCTATCTCTCGTCTTT CTCTTTGCCACCGGCGGCTTTGTCTGCGCGGCCGCCATCAAGCGCACCATCATCATGCCGCCCCTGCTCGCCTCG ACCGACTACGCCTGGGACCTGCCGGAGCAGTTTGTGTGGAGCTTCGTCGAGGTCAACGCCGGCGTCGTGTGCGCC TCGCTCGCCGCCCTCAAGCCGCTCTTCATGCGCTACATCCCCTTCCTGATCGTGTCGCGGCTGCGGTCGTCGCAG GAGCGCTCGACGGCGCCCGACTCGTCGGCGCCCGGCACCGACAAGAACGCGTCCAGCAGCACGCACACCACCGTC TACGGCGAGGCCCTCGAGCTGCCCAGCCGCGAGGACCTGCCGGCGCCGACCGTCGTCGGCCACCGCGACCGCGAC GCCAGCGACGACGAGGCCCAGCTGTGGTCGCACGGCCGCAAGCCCGCCTCGTCGCTCAACAGCGACTCCAACCGC AACGACGCCGACAGCGTTGACGGCCTTGGTGGCGCCGGCGGCGGCGGCGGCCACGGAGGCGCCGGCGGCGGCGAC CTGTACCCCGGCGCCCGACCGCCGCGGTTCACCGTCAGCGGCAGCGGCTATGGCATGGCCGGCCCGCGCAGCCCG GACGCCATCCAGGTCACCAAGGAGACGCTCGTGTCGTACGGCAAATAG |
| Transcript | >Hirsu2|10622 ATGGTGCCCTCAACGCCGCAGACAACGGTCGGCGCAACGCTCACCTACGCCATCTCCATCTCCTTCTCCAAGCTG TCGATCCTGGCCTTCTACCTGCGCGTCTCGCCCGACCAGAACTTCCGGCGCGCCGTCTACCTGCTGATCGGCGTC GTCTGCGCCTACACCGTCTCGTATATACTCGTCATCGTCTTCCGCTGTCAGCCCCTGGCCGCCGGCTGGGACCTG GCCGTCAAGGGCCGCTGCATCGACTACCTGGTCCCCATGATGGTCCTCAGCATCGCCAACATCCTCATCGACCTC GTCATCCTGTGCCTGCCTATCAAGGTCATCGTGCCGCTGCAGATCCCCACGCGGCAGAAGCTATCTCTCGTCTTT CTCTTTGCCACCGGCGGCTTTGTCTGCGCGGCCGCCATCAAGCGCACCATCATCATGCCGCCCCTGCTCGCCTCG ACCGACTACGCCTGGGACCTGCCGGAGCAGTTTGTGTGGAGCTTCGTCGAGGTCAACGCCGGCGTCGTGTGCGCC TCGCTCGCCGCCCTCAAGCCGCTCTTCATGCGCTACATCCCCTTCCTGATCGTGTCGCGGCTGCGGTCGTCGCAG GAGCGCTCGACGGCGCCCGACTCGTCGGCGCCCGGCACCGACAAGAACGCGTCCAGCAGCACGCACACCACCGTC TACGGCGAGGCCCTCGAGCTGCCCAGCCGCGAGGACCTGCCGGCGCCGACCGTCGTCGGCCACCGCGACCGCGAC GCCAGCGACGACGAGGCCCAGCTGTGGTCGCACGGCCGCAAGCCCGCCTCGTCGCTCAACAGCGACTCCAACCGC AACGACGCCGACAGCGTTGACGGCCTTGGTGGCGCCGGCGGCGGCGGCGGCCACGGAGGCGCCGGCGGCGGCGAC CTGTACCCCGGCGCCCGACCGCCGCGGTTCACCGTCAGCGGCAGCGGCTATGGCATGGCCGGCCCGCGCAGCCCG GACGCCATCCAGGTCACCAAGGAGACGCTCGTGTCGTACGGCAAATAG |
| Gene | >Hirsu2|10622 ATGGTGCCCTCAACGCCGCAGACAACGGTCGGCGCAACGCTCACCTACGCCATCTCCATCTCCTTCTCCAAGCTG TCGATCCTGGCCTTCTACCTGCGCGTCTCGCCCGACCAGAACTTCCGGCGCGCCGTCTACCTGCTGATCGGCGTC GTCTGCGCCTACACCGTCTCGTATATACTCGTCATCGTCTTCCGCTGTCAGCCCCTGGCCGCCGGCTGGGACCTG GCCGTCAAGGGCCGCTGCATCGACTACCTGGTCCCCATGATGGTCCTCAGCATCGCCAACATCCTCATCGACCTC GTCATCCTGTGCCTGCCTATCAAGGTCATCGTGCCGCTGCAGATCCCCACGCGGCAGAAGCTATCTCTCGTCTTT CTCTTTGCCACCGGCGGCTTGTGAGTGGCCTCGACTTCTGCACTCTTTTCCTCCTCAAGCTGACCTGGCGGCAAC GAAAAAAAAAAGTGTCTGCGCGGCCGCCATCAAGCGCACCATCATCATGCCGCCCCTGCTCGCCTCGACCGACTA CGCCTGGGACCTGCCGGAGCAGTTTGTGTGGAGCTTCGTCGAGGTCAACGCCGGCGTCGTGTGCGCCTCGCTCGC CGCCCTCAAGCCGCTCTTCATGCGCTACATCCCCTTCCTGATCGTGTCGCGGCTGCGGTCGTCGCAGGAGCGCTC GACGGCGCCCGACTCGTCGGCGCCCGGCACCGACAAGAACGCGTCCAGCAGCACGCACACCACCGTCTACGGCGA GGCCCTCGAGCTGCCCAGCCGCGAGGACCTGCCGGCGCCGACCGTCGTCGGCCACCGCGACCGCGACGCCAGCGA CGACGAGGCCCAGCTGTGGTCGCACGGCCGCAAGCCCGCCTCGTCGCTCAACAGCGACTCCAACCGCAACGACGC CGACAGCGTTGACGGCCTTGGTGGCGCCGGCGGCGGCGGCGGCCACGGAGGCGCCGGCGGCGGCGACCTGTACCC CGGCGCCCGACCGCCGCGGTTCACCGTCAGCGGCAGCGGCTATGGCATGGCCGGCCCGCGCAGCCCGGACGCCAT CCAGGTCACCAAGGAGACGCTCGTGTCGTACGGCAAATAG |