Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10589
Gene name
LocationContig_871:1227..2906
Strand-
Gene length (bp)1679
Transcript length (bp)1614
Coding sequence length (bp)1614
Protein length (aa) 538

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16944 KCH Fungal potassium channel 9.7E-103 18 272

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P47114|YJ24_YEAST Uncharacterized vacuolar membrane protein YJR054W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJR054W PE=1 SV=1 47 423 4.0E-35
sp|Q04705|PRM6_YEAST Pheromone-regulated membrane protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRM6 PE=2 SV=1 40 233 7.0E-28

GO

GO Term Description Terminal node
GO:0005887 integral component of plasma membrane Yes
GO:0071805 potassium ion transmembrane transport Yes
GO:0015079 potassium ion transmembrane transporter activity Yes
GO:0008324 cation transmembrane transporter activity No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0046873 metal ion transmembrane transporter activity No
GO:0015075 ion transmembrane transporter activity No
GO:0051234 establishment of localization No
GO:0016021 integral component of membrane No
GO:0098655 cation transmembrane transport No
GO:0034220 ion transmembrane transport No
GO:0015077 monovalent inorganic cation transmembrane transporter activity No
GO:0015672 monovalent inorganic cation transport No
GO:0044464 cell part No
GO:0006812 cation transport No
GO:0051179 localization No
GO:0055085 transmembrane transport No
GO:0044425 membrane part No
GO:0098660 inorganic ion transmembrane transport No
GO:0031226 intrinsic component of plasma membrane No
GO:0031224 intrinsic component of membrane No
GO:0006811 ion transport No
GO:0006810 transport No
GO:0022857 transmembrane transporter activity No
GO:0044459 plasma membrane part No
GO:0005215 transporter activity No
GO:0008150 biological_process No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0098662 inorganic cation transmembrane transport No
GO:0030001 metal ion transport No
GO:0003674 molecular_function No
GO:0006813 potassium ion transport No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.5

Transmembrane Domains

Domain # Start End Length
1 38 60 22
2 75 97 22
3 229 251 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10589
MGCINNRRKQTHEFADVQWDYINLADFKSKGCGPGFVYGYLWFSLFISIAVYAVDSFTAVNLLAFNRWSSKIEPT
IPFEVSKWIFSGCIIASFVNLGFEGIRAWRVMKRGNVAECYMDSLAARWESIRVGSQAWRRFLVFTELTKSKKGA
EYVALFTYFSFQSWIRVLLCSGPRQVVNALTLRSVYEAKLNPTSDSVEGSIRGFFDKIKTLATEDYQQAVILSGM
CFTFVVWVFSALFLLAAVLFYVFFLFHWIPRADGGLIGYCARKVNQRLTKIVTIKVSRALARGQAKRDKIDGWNP
KLAEKSGLEPGFAKPTIPNMSDDSLPEMPSLSRTGTGGTLPLYSSRPGTPNSVELGAMHQQRPVPPRSGGPGSGV
AFSPRAPLVGGAAHMGYTGPSDALPYPDMASQRPGTASSGRSFGSQPSHGSQASYGSRAAFGRLPPLAIPHDTYT
PEGRSSPAPSAISHRTGYPTGAAWPSQAMALEQQYRQPLRNMTGPPPRSVPQYSPQRNMTATSAPGSRVPPFGYD
GYDLEKQGRHGY*
Coding >Hirsu2|10589
ATGGGTTGCATCAACAATCGGAGGAAGCAGACTCACGAGTTCGCCGACGTGCAATGGGACTACATCAACCTCGCC
GACTTCAAGTCCAAGGGCTGCGGCCCCGGCTTCGTCTACGGCTACCTCTGGTTCTCCCTCTTCATCTCCATTGCC
GTCTACGCCGTCGACAGCTTCACCGCCGTCAACCTGCTGGCCTTCAACCGCTGGTCCTCCAAGATCGAGCCCACC
ATCCCCTTCGAGGTGTCCAAATGGATCTTCTCCGGCTGCATCATCGCCTCCTTCGTCAACCTCGGCTTCGAGGGC
ATCCGCGCGTGGCGCGTCATGAAGCGCGGCAACGTCGCCGAGTGCTACATGGACAGTCTGGCCGCCCGCTGGGAG
TCGATCCGCGTCGGCTCCCAAGCCTGGCGCCGCTTTCTCGTCTTCACCGAGCTGACCAAGAGTAAGAAGGGCGCC
GAGTACGTCGCCCTCTTCACCTACTTTAGCTTTCAGTCCTGGATCCGCGTCCTCCTCTGCTCCGGCCCTCGCCAG
GTCGTCAACGCCCTGACGCTCAGGTCCGTCTACGAAGCCAAGCTCAACCCCACATCCGACAGCGTCGAGGGCTCC
ATCCGCGGCTTCTTCGACAAGATCAAGACTCTGGCCACCGAGGACTACCAACAAGCCGTCATCCTGTCCGGCATG
TGCTTCACCTTCGTCGTCTGGGTCTTCTCCGCCCTCTTTCTGCTGGCCGCCGTCCTCTTCTACGTCTTCTTCCTC
TTTCACTGGATCCCCCGCGCCGACGGCGGGCTCATCGGCTACTGCGCCCGCAAGGTCAACCAGCGCCTCACCAAG
ATCGTCACCATCAAGGTCAGCAGGGCCCTCGCCAGGGGCCAGGCAAAGAGGGACAAGATTGATGGCTGGAACCCC
AAGTTGGCAGAAAAGTCGGGCCTCGAGCCGGGCTTCGCCAAGCCGACCATTCCCAACATGAGCGACGACAGCCTC
CCGGAGATGCCCTCCCTGTCGCGCACGGGGACGGGCGGAACCCTACCTCTCTACTCTTCGCGGCCCGGCACGCCC
AACAGCGTCGAGCTCGGCGCGATGCATCAGCAGCGGCCGGTGCCGCCTCGGTCCGGCGGCCCGGGCTCGGGCGTA
GCCTTTTCCCCGAGAGCGCCCCTCGTCGGCGGCGCGGCTCACATGGGCTACACTGGCCCTTCGGACGCCCTCCCC
TACCCCGACATGGCCTCCCAGCGACCCGGCACCGCGAGCTCCGGGCGGAGTTTCGGCAGCCAGCCCAGCCACGGC
TCTCAGGCGAGTTACGGCTCCCGAGCTGCTTTCGGCCGCTTGCCGCCCCTCGCGATACCGCACGACACGTACACC
CCGGAGGGCCGCTCCAGCCCGGCGCCGTCGGCCATCTCGCACCGGACGGGCTATCCCACCGGGGCGGCGTGGCCC
TCGCAGGCCATGGCCCTCGAGCAGCAGTACCGACAGCCCCTGCGGAACATGACGGGGCCGCCGCCGCGAAGCGTG
CCGCAGTACTCTCCCCAGCGGAACATGACGGCTACGTCGGCGCCAGGCTCGCGAGTTCCCCCCTTTGGATACGAC
GGATATGACCTGGAAAAACAAGGCAGGCATGGATATTAA
Transcript >Hirsu2|10589
ATGGGTTGCATCAACAATCGGAGGAAGCAGACTCACGAGTTCGCCGACGTGCAATGGGACTACATCAACCTCGCC
GACTTCAAGTCCAAGGGCTGCGGCCCCGGCTTCGTCTACGGCTACCTCTGGTTCTCCCTCTTCATCTCCATTGCC
GTCTACGCCGTCGACAGCTTCACCGCCGTCAACCTGCTGGCCTTCAACCGCTGGTCCTCCAAGATCGAGCCCACC
ATCCCCTTCGAGGTGTCCAAATGGATCTTCTCCGGCTGCATCATCGCCTCCTTCGTCAACCTCGGCTTCGAGGGC
ATCCGCGCGTGGCGCGTCATGAAGCGCGGCAACGTCGCCGAGTGCTACATGGACAGTCTGGCCGCCCGCTGGGAG
TCGATCCGCGTCGGCTCCCAAGCCTGGCGCCGCTTTCTCGTCTTCACCGAGCTGACCAAGAGTAAGAAGGGCGCC
GAGTACGTCGCCCTCTTCACCTACTTTAGCTTTCAGTCCTGGATCCGCGTCCTCCTCTGCTCCGGCCCTCGCCAG
GTCGTCAACGCCCTGACGCTCAGGTCCGTCTACGAAGCCAAGCTCAACCCCACATCCGACAGCGTCGAGGGCTCC
ATCCGCGGCTTCTTCGACAAGATCAAGACTCTGGCCACCGAGGACTACCAACAAGCCGTCATCCTGTCCGGCATG
TGCTTCACCTTCGTCGTCTGGGTCTTCTCCGCCCTCTTTCTGCTGGCCGCCGTCCTCTTCTACGTCTTCTTCCTC
TTTCACTGGATCCCCCGCGCCGACGGCGGGCTCATCGGCTACTGCGCCCGCAAGGTCAACCAGCGCCTCACCAAG
ATCGTCACCATCAAGGTCAGCAGGGCCCTCGCCAGGGGCCAGGCAAAGAGGGACAAGATTGATGGCTGGAACCCC
AAGTTGGCAGAAAAGTCGGGCCTCGAGCCGGGCTTCGCCAAGCCGACCATTCCCAACATGAGCGACGACAGCCTC
CCGGAGATGCCCTCCCTGTCGCGCACGGGGACGGGCGGAACCCTACCTCTCTACTCTTCGCGGCCCGGCACGCCC
AACAGCGTCGAGCTCGGCGCGATGCATCAGCAGCGGCCGGTGCCGCCTCGGTCCGGCGGCCCGGGCTCGGGCGTA
GCCTTTTCCCCGAGAGCGCCCCTCGTCGGCGGCGCGGCTCACATGGGCTACACTGGCCCTTCGGACGCCCTCCCC
TACCCCGACATGGCCTCCCAGCGACCCGGCACCGCGAGCTCCGGGCGGAGTTTCGGCAGCCAGCCCAGCCACGGC
TCTCAGGCGAGTTACGGCTCCCGAGCTGCTTTCGGCCGCTTGCCGCCCCTCGCGATACCGCACGACACGTACACC
CCGGAGGGCCGCTCCAGCCCGGCGCCGTCGGCCATCTCGCACCGGACGGGCTATCCCACCGGGGCGGCGTGGCCC
TCGCAGGCCATGGCCCTCGAGCAGCAGTACCGACAGCCCCTGCGGAACATGACGGGGCCGCCGCCGCGAAGCGTG
CCGCAGTACTCTCCCCAGCGGAACATGACGGCTACGTCGGCGCCAGGCTCGCGAGTTCCCCCCTTTGGATACGAC
GGATATGACCTGGAAAAACAAGGCAGGCATGGATATTAA
Gene >Hirsu2|10589
ATGGGTTGCATCAACAATCGGAGGAAGCAGACTCACGAGTTCGCCGACGTGCAATGGGACTACATCAACCTCGCC
GACTTCAAGTCCAAGGGCTGCGGCCCCGGCTTCGTCTACGGCTACCTCTGGTTCTCCCTCTTCATCTCCATTGCC
GTCTACGCCGTCGACAGCTTCACCGCCGTCAACCTGCTGGCCTTCAACCGCTGGTCCTCCAAGATCGAGCCCACC
ATCCCCTTCGAGGTGTCCAAATGGATCTTCTCCGGCTGCATCATCGCCTCCTTCGTCAACCTCGGCTTCGAGGGC
ATCCGCGCGTGGCGCGTCATGAAGCGCGGCAACGTCGCCGAGTGCTACATGGACAGTCTGGCCGCCCGCTGGGAG
TCGATCCGCGTCGGCTCCCAAGCCTGGCGCCGCTTTCTCGTCTTCACCGAGCTGACCAAGAGTAAGAAGGGCGCC
GAGTACGTCGCCCTCTTCACCTACTTTAGCTTTCAGTGTGAGTCTTGCCTCTCCCATCCCCCTGCCCCTTCCACG
GCCTCTGCTGACACCCCTCCCCGCCAGCCTGGATCCGCGTCCTCCTCTGCTCCGGCCCTCGCCAGGTCGTCAACG
CCCTGACGCTCAGGTCCGTCTACGAAGCCAAGCTCAACCCCACATCCGACAGCGTCGAGGGCTCCATCCGCGGCT
TCTTCGACAAGATCAAGACTCTGGCCACCGAGGACTACCAACAAGCCGTCATCCTGTCCGGCATGTGCTTCACCT
TCGTCGTCTGGGTCTTCTCCGCCCTCTTTCTGCTGGCCGCCGTCCTCTTCTACGTCTTCTTCCTCTTTCACTGGA
TCCCCCGCGCCGACGGCGGGCTCATCGGCTACTGCGCCCGCAAGGTCAACCAGCGCCTCACCAAGATCGTCACCA
TCAAGGTCAGCAGGGCCCTCGCCAGGGGCCAGGCAAAGAGGGACAAGATTGATGGCTGGAACCCCAAGTTGGCAG
AAAAGTCGGGCCTCGAGCCGGGCTTCGCCAAGCCGACCATTCCCAACATGAGCGACGACAGCCTCCCGGAGATGC
CCTCCCTGTCGCGCACGGGGACGGGCGGAACCCTACCTCTCTACTCTTCGCGGCCCGGCACGCCCAACAGCGTCG
AGCTCGGCGCGATGCATCAGCAGCGGCCGGTGCCGCCTCGGTCCGGCGGCCCGGGCTCGGGCGTAGCCTTTTCCC
CGAGAGCGCCCCTCGTCGGCGGCGCGGCTCACATGGGCTACACTGGCCCTTCGGACGCCCTCCCCTACCCCGACA
TGGCCTCCCAGCGACCCGGCACCGCGAGCTCCGGGCGGAGTTTCGGCAGCCAGCCCAGCCACGGCTCTCAGGCGA
GTTACGGCTCCCGAGCTGCTTTCGGCCGCTTGCCGCCCCTCGCGATACCGCACGACACGTACACCCCGGAGGGCC
GCTCCAGCCCGGCGCCGTCGGCCATCTCGCACCGGACGGGCTATCCCACCGGGGCGGCGTGGCCCTCGCAGGCCA
TGGCCCTCGAGCAGCAGTACCGACAGCCCCTGCGGAACATGACGGGGCCGCCGCCGCGAAGCGTGCCGCAGTACT
CTCCCCAGCGGAACATGACGGCTACGTCGGCGCCAGGCTCGCGAGTTCCCCCCTTTGGATACGACGGATATGACC
TGGAAAAACAAGGCAGGCATGGATATTAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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