© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10589 |
| Gene name | |
| Location | Contig_871:1227..2906 |
| Strand | - |
| Gene length (bp) | 1679 |
| Transcript length (bp) | 1614 |
| Coding sequence length (bp) | 1614 |
| Protein length (aa) | 538 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF16944 | KCH | Fungal potassium channel | 1.4E-101 | 18 | 272 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P47114|YJ24_YEAST | Uncharacterized vacuolar membrane protein YJR054W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJR054W PE=1 SV=1 | 47 | 423 | 4.0E-35 |
| sp|Q04705|PRM6_YEAST | Pheromone-regulated membrane protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRM6 PE=2 SV=1 | 40 | 233 | 7.0E-28 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0071805 | potassium ion transmembrane transport | Yes |
| GO:0015079 | potassium ion transmembrane transporter activity | Yes |
| GO:0005887 | integral component of plasma membrane | Yes |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0098662 | inorganic cation transmembrane transport | No |
| GO:0030001 | metal ion transport | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0009987 | cellular process | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0006811 | ion transport | No |
| GO:0005215 | transporter activity | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0098660 | inorganic ion transmembrane transport | No |
| GO:0016021 | integral component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0046873 | metal ion transmembrane transporter activity | No |
| GO:0006812 | cation transport | No |
| GO:0006810 | transport | No |
| GO:0098655 | cation transmembrane transport | No |
| GO:0003674 | molecular_function | No |
| GO:0034220 | ion transmembrane transport | No |
| GO:0005575 | cellular_component | No |
| GO:0055085 | transmembrane transport | No |
| GO:0006813 | potassium ion transport | No |
| GO:0031226 | intrinsic component of plasma membrane | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cell membrane|Lysosome/Vacuole | Transmembrane domain | 0.131 | 0.1543 | 0.0283 | 0.6001 | 0.0825 | 0.0019 | 0.3696 | 0.6743 | 0.2448 | 0.005 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 38 | 60 | 22 |
| 2 | 75 | 97 | 22 |
| 3 | 229 | 251 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 1289 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10589 MGCINNRRKQTHEFADVQWDYINLADFKSKGCGPGFVYGYLWFSLFISIAVYAVDSFTAVNLLAFNRWSSKIEPT IPFEVSKWIFSGCIIASFVNLGFEGIRAWRVMKRGNVAECYMDSLAARWESIRVGSQAWRRFLVFTELTKSKKGA EYVALFTYFSFQSWIRVLLCSGPRQVVNALTLRSVYEAKLNPTSDSVEGSIRGFFDKIKTLATEDYQQAVILSGM CFTFVVWVFSALFLLAAVLFYVFFLFHWIPRADGGLIGYCARKVNQRLTKIVTIKVSRALARGQAKRDKIDGWNP KLAEKSGLEPGFAKPTIPNMSDDSLPEMPSLSRTGTGGTLPLYSSRPGTPNSVELGAMHQQRPVPPRSGGPGSGV AFSPRAPLVGGAAHMGYTGPSDALPYPDMASQRPGTASSGRSFGSQPSHGSQASYGSRAAFGRLPPLAIPHDTYT PEGRSSPAPSAISHRTGYPTGAAWPSQAMALEQQYRQPLRNMTGPPPRSVPQYSPQRNMTATSAPGSRVPPFGYD GYDLEKQGRHGY* |
| Coding | >Hirsu2|10589 ATGGGTTGCATCAACAATCGGAGGAAGCAGACTCACGAGTTCGCCGACGTGCAATGGGACTACATCAACCTCGCC GACTTCAAGTCCAAGGGCTGCGGCCCCGGCTTCGTCTACGGCTACCTCTGGTTCTCCCTCTTCATCTCCATTGCC GTCTACGCCGTCGACAGCTTCACCGCCGTCAACCTGCTGGCCTTCAACCGCTGGTCCTCCAAGATCGAGCCCACC ATCCCCTTCGAGGTGTCCAAATGGATCTTCTCCGGCTGCATCATCGCCTCCTTCGTCAACCTCGGCTTCGAGGGC ATCCGCGCGTGGCGCGTCATGAAGCGCGGCAACGTCGCCGAGTGCTACATGGACAGTCTGGCCGCCCGCTGGGAG TCGATCCGCGTCGGCTCCCAAGCCTGGCGCCGCTTTCTCGTCTTCACCGAGCTGACCAAGAGTAAGAAGGGCGCC GAGTACGTCGCCCTCTTCACCTACTTTAGCTTTCAGTCCTGGATCCGCGTCCTCCTCTGCTCCGGCCCTCGCCAG GTCGTCAACGCCCTGACGCTCAGGTCCGTCTACGAAGCCAAGCTCAACCCCACATCCGACAGCGTCGAGGGCTCC ATCCGCGGCTTCTTCGACAAGATCAAGACTCTGGCCACCGAGGACTACCAACAAGCCGTCATCCTGTCCGGCATG TGCTTCACCTTCGTCGTCTGGGTCTTCTCCGCCCTCTTTCTGCTGGCCGCCGTCCTCTTCTACGTCTTCTTCCTC TTTCACTGGATCCCCCGCGCCGACGGCGGGCTCATCGGCTACTGCGCCCGCAAGGTCAACCAGCGCCTCACCAAG ATCGTCACCATCAAGGTCAGCAGGGCCCTCGCCAGGGGCCAGGCAAAGAGGGACAAGATTGATGGCTGGAACCCC AAGTTGGCAGAAAAGTCGGGCCTCGAGCCGGGCTTCGCCAAGCCGACCATTCCCAACATGAGCGACGACAGCCTC CCGGAGATGCCCTCCCTGTCGCGCACGGGGACGGGCGGAACCCTACCTCTCTACTCTTCGCGGCCCGGCACGCCC AACAGCGTCGAGCTCGGCGCGATGCATCAGCAGCGGCCGGTGCCGCCTCGGTCCGGCGGCCCGGGCTCGGGCGTA GCCTTTTCCCCGAGAGCGCCCCTCGTCGGCGGCGCGGCTCACATGGGCTACACTGGCCCTTCGGACGCCCTCCCC TACCCCGACATGGCCTCCCAGCGACCCGGCACCGCGAGCTCCGGGCGGAGTTTCGGCAGCCAGCCCAGCCACGGC TCTCAGGCGAGTTACGGCTCCCGAGCTGCTTTCGGCCGCTTGCCGCCCCTCGCGATACCGCACGACACGTACACC CCGGAGGGCCGCTCCAGCCCGGCGCCGTCGGCCATCTCGCACCGGACGGGCTATCCCACCGGGGCGGCGTGGCCC TCGCAGGCCATGGCCCTCGAGCAGCAGTACCGACAGCCCCTGCGGAACATGACGGGGCCGCCGCCGCGAAGCGTG CCGCAGTACTCTCCCCAGCGGAACATGACGGCTACGTCGGCGCCAGGCTCGCGAGTTCCCCCCTTTGGATACGAC GGATATGACCTGGAAAAACAAGGCAGGCATGGATATTAA |
| Transcript | >Hirsu2|10589 ATGGGTTGCATCAACAATCGGAGGAAGCAGACTCACGAGTTCGCCGACGTGCAATGGGACTACATCAACCTCGCC GACTTCAAGTCCAAGGGCTGCGGCCCCGGCTTCGTCTACGGCTACCTCTGGTTCTCCCTCTTCATCTCCATTGCC GTCTACGCCGTCGACAGCTTCACCGCCGTCAACCTGCTGGCCTTCAACCGCTGGTCCTCCAAGATCGAGCCCACC ATCCCCTTCGAGGTGTCCAAATGGATCTTCTCCGGCTGCATCATCGCCTCCTTCGTCAACCTCGGCTTCGAGGGC ATCCGCGCGTGGCGCGTCATGAAGCGCGGCAACGTCGCCGAGTGCTACATGGACAGTCTGGCCGCCCGCTGGGAG TCGATCCGCGTCGGCTCCCAAGCCTGGCGCCGCTTTCTCGTCTTCACCGAGCTGACCAAGAGTAAGAAGGGCGCC GAGTACGTCGCCCTCTTCACCTACTTTAGCTTTCAGTCCTGGATCCGCGTCCTCCTCTGCTCCGGCCCTCGCCAG GTCGTCAACGCCCTGACGCTCAGGTCCGTCTACGAAGCCAAGCTCAACCCCACATCCGACAGCGTCGAGGGCTCC ATCCGCGGCTTCTTCGACAAGATCAAGACTCTGGCCACCGAGGACTACCAACAAGCCGTCATCCTGTCCGGCATG TGCTTCACCTTCGTCGTCTGGGTCTTCTCCGCCCTCTTTCTGCTGGCCGCCGTCCTCTTCTACGTCTTCTTCCTC TTTCACTGGATCCCCCGCGCCGACGGCGGGCTCATCGGCTACTGCGCCCGCAAGGTCAACCAGCGCCTCACCAAG ATCGTCACCATCAAGGTCAGCAGGGCCCTCGCCAGGGGCCAGGCAAAGAGGGACAAGATTGATGGCTGGAACCCC AAGTTGGCAGAAAAGTCGGGCCTCGAGCCGGGCTTCGCCAAGCCGACCATTCCCAACATGAGCGACGACAGCCTC CCGGAGATGCCCTCCCTGTCGCGCACGGGGACGGGCGGAACCCTACCTCTCTACTCTTCGCGGCCCGGCACGCCC AACAGCGTCGAGCTCGGCGCGATGCATCAGCAGCGGCCGGTGCCGCCTCGGTCCGGCGGCCCGGGCTCGGGCGTA GCCTTTTCCCCGAGAGCGCCCCTCGTCGGCGGCGCGGCTCACATGGGCTACACTGGCCCTTCGGACGCCCTCCCC TACCCCGACATGGCCTCCCAGCGACCCGGCACCGCGAGCTCCGGGCGGAGTTTCGGCAGCCAGCCCAGCCACGGC TCTCAGGCGAGTTACGGCTCCCGAGCTGCTTTCGGCCGCTTGCCGCCCCTCGCGATACCGCACGACACGTACACC CCGGAGGGCCGCTCCAGCCCGGCGCCGTCGGCCATCTCGCACCGGACGGGCTATCCCACCGGGGCGGCGTGGCCC TCGCAGGCCATGGCCCTCGAGCAGCAGTACCGACAGCCCCTGCGGAACATGACGGGGCCGCCGCCGCGAAGCGTG CCGCAGTACTCTCCCCAGCGGAACATGACGGCTACGTCGGCGCCAGGCTCGCGAGTTCCCCCCTTTGGATACGAC GGATATGACCTGGAAAAACAAGGCAGGCATGGATATTAA |
| Gene | >Hirsu2|10589 ATGGGTTGCATCAACAATCGGAGGAAGCAGACTCACGAGTTCGCCGACGTGCAATGGGACTACATCAACCTCGCC GACTTCAAGTCCAAGGGCTGCGGCCCCGGCTTCGTCTACGGCTACCTCTGGTTCTCCCTCTTCATCTCCATTGCC GTCTACGCCGTCGACAGCTTCACCGCCGTCAACCTGCTGGCCTTCAACCGCTGGTCCTCCAAGATCGAGCCCACC ATCCCCTTCGAGGTGTCCAAATGGATCTTCTCCGGCTGCATCATCGCCTCCTTCGTCAACCTCGGCTTCGAGGGC ATCCGCGCGTGGCGCGTCATGAAGCGCGGCAACGTCGCCGAGTGCTACATGGACAGTCTGGCCGCCCGCTGGGAG TCGATCCGCGTCGGCTCCCAAGCCTGGCGCCGCTTTCTCGTCTTCACCGAGCTGACCAAGAGTAAGAAGGGCGCC GAGTACGTCGCCCTCTTCACCTACTTTAGCTTTCAGTGTGAGTCTTGCCTCTCCCATCCCCCTGCCCCTTCCACG GCCTCTGCTGACACCCCTCCCCGCCAGCCTGGATCCGCGTCCTCCTCTGCTCCGGCCCTCGCCAGGTCGTCAACG CCCTGACGCTCAGGTCCGTCTACGAAGCCAAGCTCAACCCCACATCCGACAGCGTCGAGGGCTCCATCCGCGGCT TCTTCGACAAGATCAAGACTCTGGCCACCGAGGACTACCAACAAGCCGTCATCCTGTCCGGCATGTGCTTCACCT TCGTCGTCTGGGTCTTCTCCGCCCTCTTTCTGCTGGCCGCCGTCCTCTTCTACGTCTTCTTCCTCTTTCACTGGA TCCCCCGCGCCGACGGCGGGCTCATCGGCTACTGCGCCCGCAAGGTCAACCAGCGCCTCACCAAGATCGTCACCA TCAAGGTCAGCAGGGCCCTCGCCAGGGGCCAGGCAAAGAGGGACAAGATTGATGGCTGGAACCCCAAGTTGGCAG AAAAGTCGGGCCTCGAGCCGGGCTTCGCCAAGCCGACCATTCCCAACATGAGCGACGACAGCCTCCCGGAGATGC CCTCCCTGTCGCGCACGGGGACGGGCGGAACCCTACCTCTCTACTCTTCGCGGCCCGGCACGCCCAACAGCGTCG AGCTCGGCGCGATGCATCAGCAGCGGCCGGTGCCGCCTCGGTCCGGCGGCCCGGGCTCGGGCGTAGCCTTTTCCC CGAGAGCGCCCCTCGTCGGCGGCGCGGCTCACATGGGCTACACTGGCCCTTCGGACGCCCTCCCCTACCCCGACA TGGCCTCCCAGCGACCCGGCACCGCGAGCTCCGGGCGGAGTTTCGGCAGCCAGCCCAGCCACGGCTCTCAGGCGA GTTACGGCTCCCGAGCTGCTTTCGGCCGCTTGCCGCCCCTCGCGATACCGCACGACACGTACACCCCGGAGGGCC GCTCCAGCCCGGCGCCGTCGGCCATCTCGCACCGGACGGGCTATCCCACCGGGGCGGCGTGGCCCTCGCAGGCCA TGGCCCTCGAGCAGCAGTACCGACAGCCCCTGCGGAACATGACGGGGCCGCCGCCGCGAAGCGTGCCGCAGTACT CTCCCCAGCGGAACATGACGGCTACGTCGGCGCCAGGCTCGCGAGTTCCCCCCTTTGGATACGACGGATATGACC TGGAAAAACAAGGCAGGCATGGATATTAA |