© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10563 |
| Gene name | |
| Location | Contig_866:5436..7164 |
| Strand | + |
| Gene length (bp) | 1728 |
| Transcript length (bp) | 1728 |
| Coding sequence length (bp) | 1728 |
| Protein length (aa) | 576 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 1.7E-19 | 126 | 271 |
| PF08031 | BBE | Berberine and berberine like | 7.1E-05 | 513 | 550 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 28 | 557 | 9.0E-45 |
| sp|D4AS41|A7056_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 | 28 | 564 | 2.0E-40 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 115 | 551 | 2.0E-10 |
| sp|A6P6W0|CASL1_CANSA | Cannabidiolic acid synthase-like 1 OS=Cannabis sativa GN=CBDAS2 PE=2 SV=1 | 205 | 295 | 1.0E-09 |
| sp|Q8GTB6|THCAS_CANSA | Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1 | 205 | 295 | 1.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 28 | 557 | 9.0E-45 |
| sp|D4AS41|A7056_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 | 28 | 564 | 2.0E-40 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 115 | 551 | 2.0E-10 |
| sp|A6P6W0|CASL1_CANSA | Cannabidiolic acid synthase-like 1 OS=Cannabis sativa GN=CBDAS2 PE=2 SV=1 | 205 | 295 | 1.0E-09 |
| sp|Q8GTB6|THCAS_CANSA | Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1 | 205 | 295 | 1.0E-09 |
| sp|A6P6W1|CASL2_CANSA | Cannabidiolic acid synthase-like 2 OS=Cannabis sativa GN=CBDAS3 PE=2 SV=1 | 205 | 358 | 2.0E-09 |
| sp|Q33DQ2|THCAI_CANSA | Inactive tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=3 SV=1 | 205 | 295 | 2.0E-09 |
| sp|A6P6V9|CBDAS_CANSA | Cannabidiolic acid synthase OS=Cannabis sativa GN=CBDAS PE=1 SV=1 | 205 | 296 | 8.0E-09 |
| sp|Q9FZC6|FOX3_ARATH | Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 | 145 | 428 | 3.0E-06 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 104 | 308 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0036094 | small molecule binding | No |
| GO:0043168 | anion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10563 MPSVSCLLQIGLFANALAASRQPSDAIHSLNTTLGGRVRPIEPFSLPCYSKFNGRAVKRNEALCAERQAHYTDPA YRREMPGAYMSDTSSIDASDAASTDQCLLDPHDPTNPDAWEGRDCRLGNLPSYYIQVESAADALEAFRHARMYGV RLSIKTSGHSYVGDAGMKDSVLLWTRKLQHMKRHRRFVPSACPDTETFDAITTGAGVSCGEAYRYADEENVTIIC GYSPTVGISGGWTQGGGHSVLSNVYGLGADRVVQFTVVTPDGRVRVANKCQNSDLFWALRGGGGGTYGLVMDSTH IVEPSIRLSVASISVPGRQDVVGAFLDLMVDTAIELARDGWGGHIYGNKIVYVNPLITTLDSAKKSMGRVTELAN AYGGSSDISISPNWYHFFEAHVLSSSYPVGNLNLVGCQLVPASLFENRGDRQKVKSHLRRMLAEGRMGYIPADSP YLAGQSVEANETSVHPAWYSSLWQLCVAGRWEWNSTLDERVDVAQKLQRDSMRLRRLTGSGAAYKNEANPFTVDW KTAWYGGKYEALLIAKKKYDPQRLLRCWGCVGWQEQDAEESTYTAFNQIY* |
| Coding | >Hirsu2|10563 ATGCCATCGGTGTCTTGTCTTTTGCAAATTGGCCTGTTCGCCAACGCGTTGGCTGCAAGCAGGCAGCCGAGCGAC GCCATCCACTCACTCAACACAACACTCGGCGGCCGAGTTCGGCCGATCGAGCCGTTTTCCCTGCCTTGCTACTCC AAATTCAATGGCCGGGCCGTCAAGCGAAACGAGGCTCTCTGCGCCGAGCGCCAGGCCCATTACACGGACCCAGCA TATCGCAGGGAGATGCCCGGTGCCTACATGTCCGACACGTCCTCCATCGACGCTTCGGACGCAGCTTCCACAGAC CAGTGCCTTCTCGACCCCCATGACCCGACCAACCCGGACGCCTGGGAGGGCCGCGATTGCAGGCTTGGCAACCTG CCCTCGTACTACATCCAAGTCGAGAGTGCCGCCGACGCGTTGGAGGCTTTCCGTCACGCTAGGATGTACGGGGTG AGGCTGTCCATCAAGACCAGCGGCCACTCATACGTGGGAGACGCGGGCATGAAGGATTCCGTGCTTCTATGGACC CGCAAACTGCAGCACATGAAGCGCCACCGCCGGTTCGTGCCATCCGCATGTCCGGATACCGAGACATTCGACGCC ATCACGACCGGGGCAGGGGTAAGCTGCGGCGAGGCGTACCGGTACGCCGACGAGGAAAACGTGACCATCATCTGC GGCTACTCTCCCACGGTTGGCATCTCGGGCGGCTGGACCCAGGGCGGCGGCCACTCGGTTCTCAGCAACGTCTAC GGGCTCGGCGCTGATCGTGTCGTGCAGTTCACTGTCGTCACTCCGGACGGCCGGGTGCGCGTCGCAAACAAATGT CAGAACTCGGATCTTTTCTGGGCCCTTCGTGGGGGCGGAGGAGGCACCTATGGTCTTGTGATGGATTCAACACAC ATTGTCGAGCCCAGCATCCGTCTGTCGGTTGCATCCATCAGCGTTCCCGGTCGACAAGATGTTGTCGGTGCCTTT TTGGATCTCATGGTCGATACTGCTATCGAGTTGGCTCGAGATGGATGGGGCGGTCACATATACGGCAATAAGATC GTCTATGTCAATCCGCTTATCACGACGCTAGACAGCGCCAAGAAGTCGATGGGCAGAGTCACAGAACTTGCGAAT GCTTACGGTGGAAGCTCAGATATCTCCATATCGCCCAACTGGTATCACTTCTTCGAAGCACACGTCTTAAGCTCG AGCTATCCTGTCGGCAACCTCAACCTCGTTGGTTGCCAGCTCGTGCCCGCAAGTCTCTTCGAGAACCGGGGGGAC CGGCAAAAGGTCAAAAGCCATCTTCGCAGAATGCTTGCGGAAGGCCGAATGGGGTACATCCCCGCCGACTCTCCG TACCTGGCCGGCCAGAGCGTCGAAGCAAACGAGACTTCCGTCCACCCGGCGTGGTACAGCTCCTTGTGGCAGCTG TGTGTCGCTGGGCGATGGGAGTGGAACAGTACGCTAGACGAGCGTGTCGACGTTGCCCAGAAGCTGCAGCGGGAC TCGATGCGGCTGCGACGGTTGACGGGAAGCGGTGCCGCCTACAAGAACGAAGCGAACCCGTTCACGGTCGACTGG AAGACGGCGTGGTACGGCGGAAAGTACGAGGCATTGCTGATCGCCAAGAAGAAGTACGATCCGCAGAGACTTCTG AGGTGTTGGGGGTGTGTAGGCTGGCAGGAGCAGGATGCAGAAGAGTCGACTTATACAGCATTCAACCAGATTTAC TAG |
| Transcript | >Hirsu2|10563 ATGCCATCGGTGTCTTGTCTTTTGCAAATTGGCCTGTTCGCCAACGCGTTGGCTGCAAGCAGGCAGCCGAGCGAC GCCATCCACTCACTCAACACAACACTCGGCGGCCGAGTTCGGCCGATCGAGCCGTTTTCCCTGCCTTGCTACTCC AAATTCAATGGCCGGGCCGTCAAGCGAAACGAGGCTCTCTGCGCCGAGCGCCAGGCCCATTACACGGACCCAGCA TATCGCAGGGAGATGCCCGGTGCCTACATGTCCGACACGTCCTCCATCGACGCTTCGGACGCAGCTTCCACAGAC CAGTGCCTTCTCGACCCCCATGACCCGACCAACCCGGACGCCTGGGAGGGCCGCGATTGCAGGCTTGGCAACCTG CCCTCGTACTACATCCAAGTCGAGAGTGCCGCCGACGCGTTGGAGGCTTTCCGTCACGCTAGGATGTACGGGGTG AGGCTGTCCATCAAGACCAGCGGCCACTCATACGTGGGAGACGCGGGCATGAAGGATTCCGTGCTTCTATGGACC CGCAAACTGCAGCACATGAAGCGCCACCGCCGGTTCGTGCCATCCGCATGTCCGGATACCGAGACATTCGACGCC ATCACGACCGGGGCAGGGGTAAGCTGCGGCGAGGCGTACCGGTACGCCGACGAGGAAAACGTGACCATCATCTGC GGCTACTCTCCCACGGTTGGCATCTCGGGCGGCTGGACCCAGGGCGGCGGCCACTCGGTTCTCAGCAACGTCTAC GGGCTCGGCGCTGATCGTGTCGTGCAGTTCACTGTCGTCACTCCGGACGGCCGGGTGCGCGTCGCAAACAAATGT CAGAACTCGGATCTTTTCTGGGCCCTTCGTGGGGGCGGAGGAGGCACCTATGGTCTTGTGATGGATTCAACACAC ATTGTCGAGCCCAGCATCCGTCTGTCGGTTGCATCCATCAGCGTTCCCGGTCGACAAGATGTTGTCGGTGCCTTT TTGGATCTCATGGTCGATACTGCTATCGAGTTGGCTCGAGATGGATGGGGCGGTCACATATACGGCAATAAGATC GTCTATGTCAATCCGCTTATCACGACGCTAGACAGCGCCAAGAAGTCGATGGGCAGAGTCACAGAACTTGCGAAT GCTTACGGTGGAAGCTCAGATATCTCCATATCGCCCAACTGGTATCACTTCTTCGAAGCACACGTCTTAAGCTCG AGCTATCCTGTCGGCAACCTCAACCTCGTTGGTTGCCAGCTCGTGCCCGCAAGTCTCTTCGAGAACCGGGGGGAC CGGCAAAAGGTCAAAAGCCATCTTCGCAGAATGCTTGCGGAAGGCCGAATGGGGTACATCCCCGCCGACTCTCCG TACCTGGCCGGCCAGAGCGTCGAAGCAAACGAGACTTCCGTCCACCCGGCGTGGTACAGCTCCTTGTGGCAGCTG TGTGTCGCTGGGCGATGGGAGTGGAACAGTACGCTAGACGAGCGTGTCGACGTTGCCCAGAAGCTGCAGCGGGAC TCGATGCGGCTGCGACGGTTGACGGGAAGCGGTGCCGCCTACAAGAACGAAGCGAACCCGTTCACGGTCGACTGG AAGACGGCGTGGTACGGCGGAAAGTACGAGGCATTGCTGATCGCCAAGAAGAAGTACGATCCGCAGAGACTTCTG AGGTGTTGGGGGTGTGTAGGCTGGCAGGAGCAGGATGCAGAAGAGTCGACTTATACAGCATTCAACCAGATTTAC TAG |
| Gene | >Hirsu2|10563 ATGCCATCGGTGTCTTGTCTTTTGCAAATTGGCCTGTTCGCCAACGCGTTGGCTGCAAGCAGGCAGCCGAGCGAC GCCATCCACTCACTCAACACAACACTCGGCGGCCGAGTTCGGCCGATCGAGCCGTTTTCCCTGCCTTGCTACTCC AAATTCAATGGCCGGGCCGTCAAGCGAAACGAGGCTCTCTGCGCCGAGCGCCAGGCCCATTACACGGACCCAGCA TATCGCAGGGAGATGCCCGGTGCCTACATGTCCGACACGTCCTCCATCGACGCTTCGGACGCAGCTTCCACAGAC CAGTGCCTTCTCGACCCCCATGACCCGACCAACCCGGACGCCTGGGAGGGCCGCGATTGCAGGCTTGGCAACCTG CCCTCGTACTACATCCAAGTCGAGAGTGCCGCCGACGCGTTGGAGGCTTTCCGTCACGCTAGGATGTACGGGGTG AGGCTGTCCATCAAGACCAGCGGCCACTCATACGTGGGAGACGCGGGCATGAAGGATTCCGTGCTTCTATGGACC CGCAAACTGCAGCACATGAAGCGCCACCGCCGGTTCGTGCCATCCGCATGTCCGGATACCGAGACATTCGACGCC ATCACGACCGGGGCAGGGGTAAGCTGCGGCGAGGCGTACCGGTACGCCGACGAGGAAAACGTGACCATCATCTGC GGCTACTCTCCCACGGTTGGCATCTCGGGCGGCTGGACCCAGGGCGGCGGCCACTCGGTTCTCAGCAACGTCTAC GGGCTCGGCGCTGATCGTGTCGTGCAGTTCACTGTCGTCACTCCGGACGGCCGGGTGCGCGTCGCAAACAAATGT CAGAACTCGGATCTTTTCTGGGCCCTTCGTGGGGGCGGAGGAGGCACCTATGGTCTTGTGATGGATTCAACACAC ATTGTCGAGCCCAGCATCCGTCTGTCGGTTGCATCCATCAGCGTTCCCGGTCGACAAGATGTTGTCGGTGCCTTT TTGGATCTCATGGTCGATACTGCTATCGAGTTGGCTCGAGATGGATGGGGCGGTCACATATACGGCAATAAGATC GTCTATGTCAATCCGCTTATCACGACGCTAGACAGCGCCAAGAAGTCGATGGGCAGAGTCACAGAACTTGCGAAT GCTTACGGTGGAAGCTCAGATATCTCCATATCGCCCAACTGGTATCACTTCTTCGAAGCACACGTCTTAAGCTCG AGCTATCCTGTCGGCAACCTCAACCTCGTTGGTTGCCAGCTCGTGCCCGCAAGTCTCTTCGAGAACCGGGGGGAC CGGCAAAAGGTCAAAAGCCATCTTCGCAGAATGCTTGCGGAAGGCCGAATGGGGTACATCCCCGCCGACTCTCCG TACCTGGCCGGCCAGAGCGTCGAAGCAAACGAGACTTCCGTCCACCCGGCGTGGTACAGCTCCTTGTGGCAGCTG TGTGTCGCTGGGCGATGGGAGTGGAACAGTACGCTAGACGAGCGTGTCGACGTTGCCCAGAAGCTGCAGCGGGAC TCGATGCGGCTGCGACGGTTGACGGGAAGCGGTGCCGCCTACAAGAACGAAGCGAACCCGTTCACGGTCGACTGG AAGACGGCGTGGTACGGCGGAAAGTACGAGGCATTGCTGATCGCCAAGAAGAAGTACGATCCGCAGAGACTTCTG AGGTGTTGGGGGTGTGTAGGCTGGCAGGAGCAGGATGCAGAAGAGTCGACTTATACAGCATTCAACCAGATTTAC TAG |