Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10538
Gene name
LocationContig_860:8227..9286
Strand+
Gene length (bp)1059
Transcript length (bp)996
Coding sequence length (bp)996
Protein length (aa) 332

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00445 Ribonuclease_T2 Ribonuclease T2 family 2.0E-08 188 294

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P24657|RNTR_HYPRU Ribonuclease Trv OS=Hypocrea rufa PE=1 SV=1 175 325 2.0E-12
sp|Q5B3K6|RNY1_EMENI Ribonuclease T2-like OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rny1 PE=3 SV=1 185 322 4.0E-11
sp|P10281|RNT2_ASPOR Ribonuclease T2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rntB PE=1 SV=2 190 306 1.0E-10
sp|Q4WXZ5|RNY1_ASPFU Ribonuclease T2-like OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rny1 PE=3 SV=2 185 320 3.0E-08
sp|Q6CAV7|RNY1_YARLI Ribonuclease T2-like OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RNY1 PE=3 SV=1 165 331 1.0E-07
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Swissprot ID Swissprot Description Start End E-value
sp|P24657|RNTR_HYPRU Ribonuclease Trv OS=Hypocrea rufa PE=1 SV=1 175 325 2.0E-12
sp|Q5B3K6|RNY1_EMENI Ribonuclease T2-like OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rny1 PE=3 SV=1 185 322 4.0E-11
sp|P10281|RNT2_ASPOR Ribonuclease T2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rntB PE=1 SV=2 190 306 1.0E-10
sp|Q4WXZ5|RNY1_ASPFU Ribonuclease T2-like OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rny1 PE=3 SV=2 185 320 3.0E-08
sp|Q6CAV7|RNY1_YARLI Ribonuclease T2-like OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RNY1 PE=3 SV=1 165 331 1.0E-07
sp|P81296|RNL2_LENED Ribonuclease Le2 OS=Lentinula edodes PE=1 SV=1 190 326 2.0E-07
sp|P19791|RNM_ASPPH Ribonuclease M OS=Aspergillus phoenicis PE=1 SV=1 190 319 3.0E-07
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GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0033897 ribonuclease T2 activity Yes
GO:0016849 phosphorus-oxygen lyase activity No
GO:0003674 molecular_function No
GO:0140098 catalytic activity, acting on RNA No
GO:0003676 nucleic acid binding No
GO:0016787 hydrolase activity No
GO:0004518 nuclease activity No
GO:0004521 endoribonuclease activity No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0004519 endonuclease activity No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0016829 lyase activity No
GO:0003824 catalytic activity No
GO:0097159 organic cyclic compound binding No
GO:0004540 ribonuclease activity No
GO:0140640 catalytic activity, acting on a nucleic acid No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0814 0.0444 0.95 0.1004 0.1167 0.0294 0.2265 0.2676 0.1564 0.0033

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.999661

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6933
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|5198
Ophiocordyceps subramaniannii Hirsu2|10538 (this protein)
Ophiocordyceps subramaniannii Hirsu2|7167

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10538
MMLLRALTPLAGLVSLAQAGTLGRRRLDVPLICGPERGAHGHMVLQHLWEPGSVAARDNSWTIDRLWNIKPGASA
AEEACDASRAYDNITAATVYWNVWDMVNDWRLMGYLSQTQLEQLMAKVRPIVNSAEATTLLADNGSFDVLATAGY
RDYFEYEEDWDVAKHYGQKYVPISSLQNLHRQLGDARGVEPFLQRAWARDGTCVGALALDCFKQNVGFERGMEAV
AYVHQLGALITGGHTYQDLADRGIVPSDAETYAREDVKSALEGRGYLYTGNAVLSCHQDVLVGVKYYFDIEGHFD
SGAYHPAALGSEAEKDGNCPDRVRYLASAGA*
Coding >Hirsu2|10538
ATGATGCTGCTCCGTGCCTTGACGCCTCTTGCAGGCCTCGTCTCGCTCGCCCAGGCGGGCACACTTGGCCGTCGC
CGGCTGGACGTGCCGCTCATCTGCGGCCCGGAACGGGGCGCCCACGGCCACATGGTCCTCCAGCACCTCTGGGAG
CCGGGTTCCGTGGCGGCGAGAGACAACTCGTGGACCATCGACCGCCTCTGGAACATCAAGCCCGGCGCGTCGGCG
GCCGAGGAGGCCTGCGACGCGAGCCGGGCCTACGACAACATCACGGCCGCCACCGTCTACTGGAACGTGTGGGAC
ATGGTCAACGATTGGAGGCTGATGGGCTACCTGAGCCAGACCCAGCTCGAGCAGCTCATGGCCAAGGTCAGGCCC
ATCGTCAACAGCGCCGAGGCCACGACGCTGCTGGCCGACAACGGCTCCTTCGACGTCCTCGCCACGGCCGGGTAT
CGGGACTATTTCGAGTACGAAGAAGACTGGGACGTGGCCAAGCACTACGGCCAGAAATACGTGCCCATCTCGTCG
CTCCAGAATCTGCACCGCCAGCTCGGGGACGCGCGCGGCGTCGAGCCCTTCCTGCAGCGCGCCTGGGCCAGGGAC
GGCACCTGCGTCGGCGCGCTGGCGCTCGACTGCTTCAAGCAAAACGTGGGCTTCGAGCGCGGCATGGAAGCCGTC
GCCTACGTCCACCAGCTGGGAGCGCTCATCACCGGCGGCCACACGTATCAGGACCTCGCCGACAGGGGCATCGTG
CCGTCCGACGCCGAGACGTATGCCCGGGAGGACGTCAAGTCGGCGCTCGAGGGCCGCGGGTATCTGTACACCGGC
AACGCCGTGCTGAGCTGCCACCAGGACGTCCTCGTCGGGGTCAAGTACTACTTCGACATCGAGGGCCATTTCGAC
TCTGGCGCGTATCATCCGGCTGCACTTGGCTCCGAGGCGGAAAAGGACGGGAACTGCCCCGACCGCGTACGGTAT
CTGGCCAGCGCTGGAGCTTGA
Transcript >Hirsu2|10538
ATGATGCTGCTCCGTGCCTTGACGCCTCTTGCAGGCCTCGTCTCGCTCGCCCAGGCGGGCACACTTGGCCGTCGC
CGGCTGGACGTGCCGCTCATCTGCGGCCCGGAACGGGGCGCCCACGGCCACATGGTCCTCCAGCACCTCTGGGAG
CCGGGTTCCGTGGCGGCGAGAGACAACTCGTGGACCATCGACCGCCTCTGGAACATCAAGCCCGGCGCGTCGGCG
GCCGAGGAGGCCTGCGACGCGAGCCGGGCCTACGACAACATCACGGCCGCCACCGTCTACTGGAACGTGTGGGAC
ATGGTCAACGATTGGAGGCTGATGGGCTACCTGAGCCAGACCCAGCTCGAGCAGCTCATGGCCAAGGTCAGGCCC
ATCGTCAACAGCGCCGAGGCCACGACGCTGCTGGCCGACAACGGCTCCTTCGACGTCCTCGCCACGGCCGGGTAT
CGGGACTATTTCGAGTACGAAGAAGACTGGGACGTGGCCAAGCACTACGGCCAGAAATACGTGCCCATCTCGTCG
CTCCAGAATCTGCACCGCCAGCTCGGGGACGCGCGCGGCGTCGAGCCCTTCCTGCAGCGCGCCTGGGCCAGGGAC
GGCACCTGCGTCGGCGCGCTGGCGCTCGACTGCTTCAAGCAAAACGTGGGCTTCGAGCGCGGCATGGAAGCCGTC
GCCTACGTCCACCAGCTGGGAGCGCTCATCACCGGCGGCCACACGTATCAGGACCTCGCCGACAGGGGCATCGTG
CCGTCCGACGCCGAGACGTATGCCCGGGAGGACGTCAAGTCGGCGCTCGAGGGCCGCGGGTATCTGTACACCGGC
AACGCCGTGCTGAGCTGCCACCAGGACGTCCTCGTCGGGGTCAAGTACTACTTCGACATCGAGGGCCATTTCGAC
TCTGGCGCGTATCATCCGGCTGCACTTGGCTCCGAGGCGGAAAAGGACGGGAACTGCCCCGACCGCGTACGGTAT
CTGGCCAGCGCTGGAGCTTGA
Gene >Hirsu2|10538
ATGATGCTGCTCCGTGCCTTGACGCCTCTTGCAGGCCTCGTCTCGCTCGCCCAGGCGGGCACACTTGGCCGTCGC
CGGCTGGACGTGCCGCTCATCTGCGGCCCGGAACGGGGCGCCCACGGCCACATGGTCCTCCAGCACCTCTGGGAG
CCGGGTTCCGTGGCGGCGAGAGACAGTGAGTCGCGGCGGAGCTCCCACGGACGGTCGCGGAGACTGACGACGTAA
CCCGCGCACCTAGACTCGTGGACCATCGACCGCCTCTGGAACATCAAGCCCGGCGCGTCGGCGGCCGAGGAGGCC
TGCGACGCGAGCCGGGCCTACGACAACATCACGGCCGCCACCGTCTACTGGAACGTGTGGGACATGGTCAACGAT
TGGAGGCTGATGGGCTACCTGAGCCAGACCCAGCTCGAGCAGCTCATGGCCAAGGTCAGGCCCATCGTCAACAGC
GCCGAGGCCACGACGCTGCTGGCCGACAACGGCTCCTTCGACGTCCTCGCCACGGCCGGGTATCGGGACTATTTC
GAGTACGAAGAAGACTGGGACGTGGCCAAGCACTACGGCCAGAAATACGTGCCCATCTCGTCGCTCCAGAATCTG
CACCGCCAGCTCGGGGACGCGCGCGGCGTCGAGCCCTTCCTGCAGCGCGCCTGGGCCAGGGACGGCACCTGCGTC
GGCGCGCTGGCGCTCGACTGCTTCAAGCAAAACGTGGGCTTCGAGCGCGGCATGGAAGCCGTCGCCTACGTCCAC
CAGCTGGGAGCGCTCATCACCGGCGGCCACACGTATCAGGACCTCGCCGACAGGGGCATCGTGCCGTCCGACGCC
GAGACGTATGCCCGGGAGGACGTCAAGTCGGCGCTCGAGGGCCGCGGGTATCTGTACACCGGCAACGCCGTGCTG
AGCTGCCACCAGGACGTCCTCGTCGGGGTCAAGTACTACTTCGACATCGAGGGCCATTTCGACTCTGGCGCGTAT
CATCCGGCTGCACTTGGCTCCGAGGCGGAAAAGGACGGGAACTGCCCCGACCGCGTACGGTATCTGGCCAGCGCT
GGAGCTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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