© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10536 |
| Gene name | |
| Location | Contig_860:3423..3996 |
| Strand | + |
| Gene length (bp) | 573 |
| Transcript length (bp) | 573 |
| Coding sequence length (bp) | 573 |
| Protein length (aa) | 191 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1537 | 0.0555 | 0.9189 | 0.1192 | 0.0387 | 0.0112 | 0.208 | 0.2478 | 0.1336 | 0.0019 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 20 | 0.999684 |
| Orthofinder run ID | 4 |
| Orthogroup | 6932 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|10536 (this protein) |
| Ophiocordyceps subramaniannii | Hirsu2|11194 |
| Ophiocordyceps subramaniannii | Hirsu2|8589 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10536 MKFLAKSFILCLAATELATASSAHRITEEYERGIAQFTVAIREIDAGFTTWHGDIQRLYPLWHNYFQSVAHLTHE TLPYAEPLEREEDIRRLVPGIKRAVDAAEAITQTYKLNLALIERKKLCDDFLKIALKILFTEIEFFEAFLAKIPD CRLGRGLAPYKLTIDKIVRELVQVFAPGNCTDSGSRGHHY* |
| Coding | >Hirsu2|10536 ATGAAGTTCCTGGCCAAGTCTTTCATCTTGTGTCTCGCAGCGACGGAGCTTGCCACTGCCTCGAGCGCCCACAGA ATCACGGAAGAGTACGAACGGGGTATAGCCCAGTTCACGGTCGCGATACGAGAAATCGACGCCGGATTCACAACA TGGCACGGCGACATCCAACGCCTATACCCACTCTGGCACAATTACTTCCAAAGCGTAGCCCACCTGACTCACGAG ACTCTCCCCTACGCCGAGCCGCTGGAACGGGAAGAAGATATCAGACGCCTTGTCCCGGGCATCAAACGGGCCGTG GACGCCGCGGAAGCGATCACCCAGACATACAAGTTGAACCTGGCCCTCATCGAAAGAAAGAAGCTCTGCGACGAT TTTCTGAAGATTGCGCTTAAGATCCTCTTCACCGAGATTGAGTTTTTCGAAGCCTTTCTGGCCAAGATCCCGGAC TGCCGCCTCGGGCGTGGGTTGGCACCCTATAAGCTAACGATCGACAAGATCGTGCGAGAGCTCGTCCAGGTTTTC GCGCCCGGGAACTGTACTGATTCTGGTTCGAGGGGCCATCATTATTAG |
| Transcript | >Hirsu2|10536 ATGAAGTTCCTGGCCAAGTCTTTCATCTTGTGTCTCGCAGCGACGGAGCTTGCCACTGCCTCGAGCGCCCACAGA ATCACGGAAGAGTACGAACGGGGTATAGCCCAGTTCACGGTCGCGATACGAGAAATCGACGCCGGATTCACAACA TGGCACGGCGACATCCAACGCCTATACCCACTCTGGCACAATTACTTCCAAAGCGTAGCCCACCTGACTCACGAG ACTCTCCCCTACGCCGAGCCGCTGGAACGGGAAGAAGATATCAGACGCCTTGTCCCGGGCATCAAACGGGCCGTG GACGCCGCGGAAGCGATCACCCAGACATACAAGTTGAACCTGGCCCTCATCGAAAGAAAGAAGCTCTGCGACGAT TTTCTGAAGATTGCGCTTAAGATCCTCTTCACCGAGATTGAGTTTTTCGAAGCCTTTCTGGCCAAGATCCCGGAC TGCCGCCTCGGGCGTGGGTTGGCACCCTATAAGCTAACGATCGACAAGATCGTGCGAGAGCTCGTCCAGGTTTTC GCGCCCGGGAACTGTACTGATTCTGGTTCGAGGGGCCATCATTATTAG |
| Gene | >Hirsu2|10536 ATGAAGTTCCTGGCCAAGTCTTTCATCTTGTGTCTCGCAGCGACGGAGCTTGCCACTGCCTCGAGCGCCCACAGA ATCACGGAAGAGTACGAACGGGGTATAGCCCAGTTCACGGTCGCGATACGAGAAATCGACGCCGGATTCACAACA TGGCACGGCGACATCCAACGCCTATACCCACTCTGGCACAATTACTTCCAAAGCGTAGCCCACCTGACTCACGAG ACTCTCCCCTACGCCGAGCCGCTGGAACGGGAAGAAGATATCAGACGCCTTGTCCCGGGCATCAAACGGGCCGTG GACGCCGCGGAAGCGATCACCCAGACATACAAGTTGAACCTGGCCCTCATCGAAAGAAAGAAGCTCTGCGACGAT TTTCTGAAGATTGCGCTTAAGATCCTCTTCACCGAGATTGAGTTTTTCGAAGCCTTTCTGGCCAAGATCCCGGAC TGCCGCCTCGGGCGTGGGTTGGCACCCTATAAGCTAACGATCGACAAGATCGTGCGAGAGCTCGTCCAGGTTTTC GCGCCCGGGAACTGTACTGATTCTGGTTCGAGGGGCCATCATTATTAG |