Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10528
Gene name
LocationContig_86:25348..25951
Strand+
Gene length (bp)603
Transcript length (bp)462
Coding sequence length (bp)462
Protein length (aa) 154

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08881 CVNH CVNH domain 8.6E-09 36 119
PF08881 CVNH CVNH domain 1.2E-05 80 139

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1352 0.0451 0.911 0.1295 0.0515 0.0261 0.1936 0.1524 0.0931 0.0018

SignalP

SignalP signal predicted Location Score
Yes 1 - 16 0.999781

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5989
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|2416
Ophiocordyceps camponoti-floridani Ophcf2|03706
Ophiocordyceps camponoti-rufipedis Ophun1|1024
Ophiocordyceps subramaniannii Hirsu2|10528 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10528
MFCGLVLLAALGAAVAQLKTQCEFVGFLDSSQEHPVAYTARCSPQPEGKMDVCSKLELSPCLANRNGQLQASRDS
STAGFKESCPSCHIDADGWTLSCLCKRMNNQYNYASIDLDTVIYLQNDGIMACSGTVAKQLSECPYTRIGAPPVF
SAV*
Coding >Hirsu2|10528
ATGTTCTGCGGCCTGGTCCTGCTCGCTGCCCTCGGGGCGGCAGTTGCCCAACTGAAGACACAATGCGAGTTCGTC
GGCTTCTTGGACAGCTCCCAGGAGCATCCCGTCGCGTACACGGCCCGTTGCTCGCCCCAGCCGGAGGGCAAGATG
GACGTCTGCTCGAAGCTTGAGCTGTCGCCCTGCCTGGCCAACCGCAACGGCCAGCTGCAGGCCTCGAGGGACAGC
AGCACGGCCGGCTTCAAGGAGTCGTGCCCCAGTTGTCACATCGACGCAGACGGATGGACCCTGTCCTGCCTGTGC
AAGCGGATGAACAACCAGTACAACTATGCGTCCATCGACCTGGATACCGTCATCTACCTCCAAAACGACGGCATC
ATGGCCTGCTCCGGAACGGTCGCCAAGCAGCTATCCGAATGCCCGTACACGCGGATCGGGGCCCCGCCCGTCTTC
TCTGCAGTCTGA
Transcript >Hirsu2|10528
ATGTTCTGCGGCCTGGTCCTGCTCGCTGCCCTCGGGGCGGCAGTTGCCCAACTGAAGACACAATGCGAGTTCGTC
GGCTTCTTGGACAGCTCCCAGGAGCATCCCGTCGCGTACACGGCCCGTTGCTCGCCCCAGCCGGAGGGCAAGATG
GACGTCTGCTCGAAGCTTGAGCTGTCGCCCTGCCTGGCCAACCGCAACGGCCAGCTGCAGGCCTCGAGGGACAGC
AGCACGGCCGGCTTCAAGGAGTCGTGCCCCAGTTGTCACATCGACGCAGACGGATGGACCCTGTCCTGCCTGTGC
AAGCGGATGAACAACCAGTACAACTATGCGTCCATCGACCTGGATACCGTCATCTACCTCCAAAACGACGGCATC
ATGGCCTGCTCCGGAACGGTCGCCAAGCAGCTATCCGAATGCCCGTACACGCGGATCGGGGCCCCGCCCGTCTTC
TCTGCAGTCTGA
Gene >Hirsu2|10528
ATGTTCTGCGGCCTGGTCCTGCTCGCTGCCCTCGGGGCGGCAGTTGCCCAACTGAAGACACAATGCGAGTTCGTC
GGCTTCTTGGACAGCTCCCAGGAGCATCCCGTCGCGTACACGGCCCGTTGCTCGCCCCAGCCGGAGGGCAAGATG
GACGTCTGCTCGAAGCTTGAGCTGTCGCCCTGCCTGGCCAACCGCAACGGCCAGCTGCAGGCCTCGAGGGAGTAT
GTCTGCCGCGAGCCGACGAGCAAGACTGCGAGACGGGACGGCTGACGGATGGCACAGCAGCAGCACGGCCGGCTT
CAAGGAGTCGTGCCCCAGTTGTCACATCGACGCAGACGGATGGACCCTGTCCTGCCTGTGCAAGCGGATGAACAA
CCAGTACAACTATGCGTCCATCGACCTGGGTAAGAAAAACGCCAACCTACCTCACATAGCTCTCCGAGGAATCGG
CAAGGCCTCTAACCGCGCATGTCGAGAGAGCCAGATACCGTCATCTACCTCCAAAACGACGGCATCATGGCCTGC
TCCGGAACGGTCGCCAAGCAGCTATCCGAATGCCCGTACACGCGGATCGGGGCCCCGCCCGTCTTCTCTGCAGTC
TGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail