Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|10528
Gene name
Location	Contig_86:25348..25951
Strand	+
Gene length (bp)	603
Transcript length (bp)	462
Coding sequence length (bp)	462
Protein length (aa)	154

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08881	CVNH	CVNH domain	8.6E-09	36	119
PF08881	CVNH	CVNH domain	1.2E-05	80	139

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 17	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|10528 MFCGLVLLAALGAAVAQLKTQCEFVGFLDSSQEHPVAYTARCSPQPEGKMDVCSKLELSPCLANRNGQLQASRDS STAGFKESCPSCHIDADGWTLSCLCKRMNNQYNYASIDLDTVIYLQNDGIMACSGTVAKQLSECPYTRIGAPPVF SAV*
Coding	>Hirsu2\|10528 ATGTTCTGCGGCCTGGTCCTGCTCGCTGCCCTCGGGGCGGCAGTTGCCCAACTGAAGACACAATGCGAGTTCGTC GGCTTCTTGGACAGCTCCCAGGAGCATCCCGTCGCGTACACGGCCCGTTGCTCGCCCCAGCCGGAGGGCAAGATG GACGTCTGCTCGAAGCTTGAGCTGTCGCCCTGCCTGGCCAACCGCAACGGCCAGCTGCAGGCCTCGAGGGACAGC AGCACGGCCGGCTTCAAGGAGTCGTGCCCCAGTTGTCACATCGACGCAGACGGATGGACCCTGTCCTGCCTGTGC AAGCGGATGAACAACCAGTACAACTATGCGTCCATCGACCTGGATACCGTCATCTACCTCCAAAACGACGGCATC ATGGCCTGCTCCGGAACGGTCGCCAAGCAGCTATCCGAATGCCCGTACACGCGGATCGGGGCCCCGCCCGTCTTC TCTGCAGTCTGA
Transcript	>Hirsu2\|10528 ATGTTCTGCGGCCTGGTCCTGCTCGCTGCCCTCGGGGCGGCAGTTGCCCAACTGAAGACACAATGCGAGTTCGTC GGCTTCTTGGACAGCTCCCAGGAGCATCCCGTCGCGTACACGGCCCGTTGCTCGCCCCAGCCGGAGGGCAAGATG GACGTCTGCTCGAAGCTTGAGCTGTCGCCCTGCCTGGCCAACCGCAACGGCCAGCTGCAGGCCTCGAGGGACAGC AGCACGGCCGGCTTCAAGGAGTCGTGCCCCAGTTGTCACATCGACGCAGACGGATGGACCCTGTCCTGCCTGTGC AAGCGGATGAACAACCAGTACAACTATGCGTCCATCGACCTGGATACCGTCATCTACCTCCAAAACGACGGCATC ATGGCCTGCTCCGGAACGGTCGCCAAGCAGCTATCCGAATGCCCGTACACGCGGATCGGGGCCCCGCCCGTCTTC TCTGCAGTCTGA
Gene	>Hirsu2\|10528 ATGTTCTGCGGCCTGGTCCTGCTCGCTGCCCTCGGGGCGGCAGTTGCCCAACTGAAGACACAATGCGAGTTCGTC GGCTTCTTGGACAGCTCCCAGGAGCATCCCGTCGCGTACACGGCCCGTTGCTCGCCCCAGCCGGAGGGCAAGATG GACGTCTGCTCGAAGCTTGAGCTGTCGCCCTGCCTGGCCAACCGCAACGGCCAGCTGCAGGCCTCGAGGGAGTAT GTCTGCCGCGAGCCGACGAGCAAGACTGCGAGACGGGACGGCTGACGGATGGCACAGCAGCAGCACGGCCGGCTT CAAGGAGTCGTGCCCCAGTTGTCACATCGACGCAGACGGATGGACCCTGTCCTGCCTGTGCAAGCGGATGAACAA CCAGTACAACTATGCGTCCATCGACCTGGGTAAGAAAAACGCCAACCTACCTCACATAGCTCTCCGAGGAATCGG CAAGGCCTCTAACCGCGCATGTCGAGAGAGCCAGATACCGTCATCTACCTCCAAAACGACGGCATCATGGCCTGC TCCGGAACGGTCGCCAAGCAGCTATCCGAATGCCCGTACACGCGGATCGGGGCCCCGCCCGTCTTCTCTGCAGTC TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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