Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1052
Gene name
LocationContig_1217:5491..7396
Strand-
Gene length (bp)1905
Transcript length (bp)1905
Coding sequence length (bp)1905
Protein length (aa) 635

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02847 MA3 MA3 domain 1.4E-23 381 486
PF02854 MIF4G MIF4G domain 2.7E-10 94 276

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q5BGP1|CWC22_EMENI Pre-mRNA-splicing factor cwc22 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cwc22 PE=3 SV=2 39 583 0.0E+00
sp|Q9VJ87|CWC22_DROME Pre-mRNA-splicing factor CWC22 homolog OS=Drosophila melanogaster GN=ncm PE=1 SV=3 54 583 0.0E+00
sp|Q5ZKA3|CWC22_CHICK Pre-mRNA-splicing factor CWC22 homolog OS=Gallus gallus GN=CWC22 PE=2 SV=2 39 578 0.0E+00
sp|Q8C5N3|CWC22_MOUSE Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus GN=Cwc22 PE=1 SV=1 11 578 0.0E+00
sp|Q5RA93|CWC22_PONAB Pre-mRNA-splicing factor CWC22 homolog OS=Pongo abelii GN=CWC22 PE=2 SV=1 21 578 0.0E+00
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Swissprot ID Swissprot Description Start End E-value
sp|Q5BGP1|CWC22_EMENI Pre-mRNA-splicing factor cwc22 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cwc22 PE=3 SV=2 39 583 0.0E+00
sp|Q9VJ87|CWC22_DROME Pre-mRNA-splicing factor CWC22 homolog OS=Drosophila melanogaster GN=ncm PE=1 SV=3 54 583 0.0E+00
sp|Q5ZKA3|CWC22_CHICK Pre-mRNA-splicing factor CWC22 homolog OS=Gallus gallus GN=CWC22 PE=2 SV=2 39 578 0.0E+00
sp|Q8C5N3|CWC22_MOUSE Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus GN=Cwc22 PE=1 SV=1 11 578 0.0E+00
sp|Q5RA93|CWC22_PONAB Pre-mRNA-splicing factor CWC22 homolog OS=Pongo abelii GN=CWC22 PE=2 SV=1 21 578 0.0E+00
sp|Q08C72|CWC22_DANRE Pre-mRNA-splicing factor CWC22 homolog OS=Danio rerio GN=cwc22 PE=2 SV=1 17 578 0.0E+00
sp|Q9HCG8|CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog OS=Homo sapiens GN=CWC22 PE=1 SV=3 21 578 0.0E+00
sp|Q52KN9|CWC22_XENLA Pre-mRNA-splicing factor CWC22 homolog OS=Xenopus laevis GN=cwc22 PE=2 SV=1 35 578 0.0E+00
sp|Q9P6R9|CWC22_SCHPO Pre-mRNA-splicing factor cwf22 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf22 PE=1 SV=3 48 578 0.0E+00
sp|P0CM97|CWC22_CRYNB Pre-mRNA-splicing factor CWC22 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CWC22 PE=3 SV=1 39 578 0.0E+00
sp|P0CM96|CWC22_CRYNJ Pre-mRNA-splicing factor CWC22 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CWC22 PE=3 SV=1 39 578 0.0E+00
sp|Q52B63|CWC22_MAGO7 Pre-mRNA-splicing factor CWC22 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CWC22 PE=3 SV=1 9 576 0.0E+00
sp|Q7RX84|CWC22_NEUCR Pre-mRNA-splicing factor cwc22 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=msp-1 PE=3 SV=1 15 576 0.0E+00
sp|Q4WKB9|CWC22_ASPFU Pre-mRNA-splicing factor cwc22 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cwc22 PE=3 SV=1 39 588 0.0E+00
sp|Q4PCY0|CWC22_USTMA Pre-mRNA-splicing factor CWC22 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CWC22 PE=3 SV=2 43 578 0.0E+00
sp|Q17336|CWC22_CAEEL Pre-mRNA-splicing factor CWC22 homolog OS=Caenorhabditis elegans GN=let-858 PE=2 SV=1 54 572 2.0E-174
sp|A8WT19|CWC22_CAEBR Pre-mRNA-splicing factor CWC22 homolog OS=Caenorhabditis briggsae GN=let-858 PE=3 SV=2 27 573 8.0E-171
sp|Q6C8C5|CWC22_YARLI Pre-mRNA-splicing factor CWC22 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CWC22 PE=3 SV=1 37 576 1.0E-170
sp|Q6BU84|CWC22_DEBHA Pre-mRNA-splicing factor CWC22 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CWC22 PE=3 SV=2 49 577 5.0E-165
sp|Q59XY0|CWC22_CANAL Pre-mRNA-splicing factor CWC22 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CWC22 PE=3 SV=1 84 579 2.0E-104
sp|Q751P4|CWC22_ASHGO Pre-mRNA-splicing factor CWC22 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CWC22 PE=3 SV=1 82 578 5.0E-69
sp|P53333|CWC22_YEAST Pre-mRNA-splicing factor CWC22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CWC22 PE=1 SV=1 74 573 1.0E-56
sp|Q5C9Z4|NOM1_HUMAN Nucleolar MIF4G domain-containing protein 1 OS=Homo sapiens GN=NOM1 PE=1 SV=1 59 498 1.0E-18
sp|Q3UFM5|NOM1_MOUSE Nucleolar MIF4G domain-containing protein 1 OS=Mus musculus GN=Nom1 PE=1 SV=2 56 498 2.0E-18
sp|O13971|SGD1_SCHPO Suppressor of glycerol defect protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sgd1 PE=3 SV=1 32 475 4.0E-17
sp|Q06132|SGD1_YEAST Suppressor of glycerol defect protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SGD1 PE=1 SV=1 62 458 7.0E-08
sp|Q9W020|NOM1_DROME Nucleolar MIF4G domain-containing protein 1 homolog OS=Drosophila melanogaster GN=CG9004 PE=2 SV=1 20 494 1.0E-07
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GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0005515 protein binding Yes
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.6578 0.5784 0.1263 0.083 0.0685 0.0148 0.0434 0.0765 0.0892 0.006

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1267
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3845
Ophiocordyceps australis map64 (Brazil) OphauB2|5687
Ophiocordyceps camponoti-floridani Ophcf2|04472
Ophiocordyceps camponoti-rufipedis Ophun1|7042
Ophiocordyceps kimflemingae Ophio5|2319
Ophiocordyceps subramaniannii Hirsu2|1052 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1052
MASAKVEMPRRERGRHREGDSYRPARPGRSPPPPPPVRTEEEKQAAAKAEYEKLLNMRSGGTYIPPARLRALQAQ
ITDKTSKEYQRMAWEALKKSINGLINKVNTANIKHIVPELFGENLIRGRGLFCRSIMKAQAASLPFTPIYAAMAA
IVNSKLPQVGELLIRRLIMQFRKGFKRNDKAVCLSSTTFLAHLINHQVQHEMLAGQILLLLLHKPTDDSVEIAVG
FCREVGQYVEEMQPSIAMAVFDQFRNILHEADIDKRTQYMIEVLFQVRKDKFKDNPAIKEELDLVEEEDQITHQV
NLEGDVDVQDGLNVFKFDPDWEDNEEAYKNLRAQILGEASDDDDDDDDADGGDDDESSEEEDEATKAMEIKDQSN
TDLVNLRRTIYLTIMSSADPEEAVHKLMKVNLPAGQEPELPSMIVECCSQEKTYTKFFGLIGERFAKINRLWCDL
FEQAFAKYYETIHRYENNKLRNIAMLFGHMFAEDALGWHCLSVIHLNEDETTSSSRIFIKILFQSIAEEVGMPKL
RARMADATLRPSLEGIFPRDSARNVRFAINYFTSIGMGALTEEMREFLQSMPKPALPAPAAGDDDWDWRRVEAQR
RRGIDTARHFQALDDVHGLFDGGTHGALGSFGPC*
Coding >Hirsu2|1052
ATGGCATCGGCCAAGGTTGAAATGCCGCGCCGCGAACGCGGCCGCCATCGCGAGGGCGACTCGTACCGTCCGGCC
CGGCCCGGGCGCTCGCCGCCGCCGCCGCCGCCGGTGCGCACCGAGGAGGAGAAGCAGGCGGCGGCCAAGGCCGAG
TACGAGAAGCTGCTCAACATGCGCTCGGGCGGCACTTACATCCCGCCGGCGCGGCTCCGGGCGCTGCAGGCGCAG
ATCACGGACAAGACGAGCAAGGAGTACCAGCGGATGGCGTGGGAGGCGCTCAAGAAGAGCATCAACGGCCTGATC
AACAAGGTCAACACGGCAAACATCAAGCACATCGTGCCCGAGCTCTTCGGCGAGAACCTGATCCGCGGCCGCGGC
CTCTTCTGCCGCTCCATCATGAAGGCCCAGGCGGCCAGCCTGCCCTTCACCCCCATCTACGCGGCCATGGCGGCC
ATCGTCAACTCCAAGCTGCCCCAGGTGGGCGAGCTACTGATCAGGCGGCTCATCATGCAGTTCCGCAAGGGCTTC
AAGCGCAACGACAAGGCCGTCTGCCTGTCCTCGACCACCTTCCTCGCCCACCTCATCAACCACCAGGTGCAGCAC
GAGATGCTGGCCGGCCAGATCCTGCTGCTGCTGCTGCACAAGCCGACGGACGACAGCGTCGAGATCGCCGTCGGC
TTCTGCCGCGAGGTCGGCCAGTACGTCGAGGAGATGCAGCCCTCCATCGCCATGGCCGTCTTCGACCAGTTCAGG
AACATCCTGCACGAGGCCGACATCGACAAGCGCACCCAGTACATGATCGAGGTGCTGTTCCAGGTCCGCAAGGAC
AAGTTCAAGGATAACCCGGCCATCAAGGAGGAGCTGGACCTCGTCGAGGAGGAGGACCAGATCACGCACCAGGTC
AACCTCGAGGGCGACGTCGACGTCCAGGACGGCCTCAACGTCTTCAAGTTCGACCCCGATTGGGAAGACAACGAA
GAGGCCTACAAGAACTTGAGGGCCCAGATCTTGGGCGAGGCGAGCGATGATGATGACGACGACGACGACGCCGAC
GGGGGCGACGACGACGAAAGCTCCGAGGAAGAGGACGAGGCGACAAAGGCGATGGAGATCAAGGACCAGTCCAAC
ACCGACCTGGTGAACCTCAGGAGGACCATCTACCTGACCATCATGTCGAGCGCCGATCCGGAGGAGGCCGTGCAC
AAGCTCATGAAGGTCAACCTGCCCGCCGGCCAGGAGCCGGAGCTGCCCTCGATGATCGTCGAGTGCTGCTCCCAG
GAGAAGACGTACACCAAGTTCTTCGGCCTCATCGGCGAGCGCTTCGCCAAGATCAACCGGCTGTGGTGCGACCTC
TTCGAGCAGGCCTTCGCCAAGTACTACGAAACCATCCACCGCTACGAGAACAACAAGCTGCGCAACATCGCCATG
CTCTTCGGCCACATGTTCGCCGAGGACGCGCTCGGCTGGCACTGCCTGTCCGTCATCCACCTGAACGAGGACGAG
ACGACGTCGAGCAGCCGCATCTTCATCAAGATCCTCTTCCAGAGCATCGCCGAGGAGGTCGGCATGCCCAAGCTC
AGGGCCAGGATGGCGGACGCGACGCTGCGGCCCAGCCTCGAGGGCATATTCCCCCGGGACAGCGCGCGCAACGTC
CGGTTCGCCATCAACTACTTCACCAGCATCGGCATGGGCGCCCTGACGGAGGAGATGCGCGAGTTCCTGCAGAGC
ATGCCCAAGCCGGCCTTGCCCGCGCCCGCCGCCGGCGACGACGACTGGGACTGGCGCCGCGTCGAGGCCCAGCGC
CGGAGGGGCATCGACACAGCCCGCCACTTCCAGGCCCTCGACGACGTGCACGGCCTGTTCGATGGCGGCACCCAC
GGCGCGCTCGGCTCCTTTGGCCCCTGCTGA
Transcript >Hirsu2|1052
ATGGCATCGGCCAAGGTTGAAATGCCGCGCCGCGAACGCGGCCGCCATCGCGAGGGCGACTCGTACCGTCCGGCC
CGGCCCGGGCGCTCGCCGCCGCCGCCGCCGCCGGTGCGCACCGAGGAGGAGAAGCAGGCGGCGGCCAAGGCCGAG
TACGAGAAGCTGCTCAACATGCGCTCGGGCGGCACTTACATCCCGCCGGCGCGGCTCCGGGCGCTGCAGGCGCAG
ATCACGGACAAGACGAGCAAGGAGTACCAGCGGATGGCGTGGGAGGCGCTCAAGAAGAGCATCAACGGCCTGATC
AACAAGGTCAACACGGCAAACATCAAGCACATCGTGCCCGAGCTCTTCGGCGAGAACCTGATCCGCGGCCGCGGC
CTCTTCTGCCGCTCCATCATGAAGGCCCAGGCGGCCAGCCTGCCCTTCACCCCCATCTACGCGGCCATGGCGGCC
ATCGTCAACTCCAAGCTGCCCCAGGTGGGCGAGCTACTGATCAGGCGGCTCATCATGCAGTTCCGCAAGGGCTTC
AAGCGCAACGACAAGGCCGTCTGCCTGTCCTCGACCACCTTCCTCGCCCACCTCATCAACCACCAGGTGCAGCAC
GAGATGCTGGCCGGCCAGATCCTGCTGCTGCTGCTGCACAAGCCGACGGACGACAGCGTCGAGATCGCCGTCGGC
TTCTGCCGCGAGGTCGGCCAGTACGTCGAGGAGATGCAGCCCTCCATCGCCATGGCCGTCTTCGACCAGTTCAGG
AACATCCTGCACGAGGCCGACATCGACAAGCGCACCCAGTACATGATCGAGGTGCTGTTCCAGGTCCGCAAGGAC
AAGTTCAAGGATAACCCGGCCATCAAGGAGGAGCTGGACCTCGTCGAGGAGGAGGACCAGATCACGCACCAGGTC
AACCTCGAGGGCGACGTCGACGTCCAGGACGGCCTCAACGTCTTCAAGTTCGACCCCGATTGGGAAGACAACGAA
GAGGCCTACAAGAACTTGAGGGCCCAGATCTTGGGCGAGGCGAGCGATGATGATGACGACGACGACGACGCCGAC
GGGGGCGACGACGACGAAAGCTCCGAGGAAGAGGACGAGGCGACAAAGGCGATGGAGATCAAGGACCAGTCCAAC
ACCGACCTGGTGAACCTCAGGAGGACCATCTACCTGACCATCATGTCGAGCGCCGATCCGGAGGAGGCCGTGCAC
AAGCTCATGAAGGTCAACCTGCCCGCCGGCCAGGAGCCGGAGCTGCCCTCGATGATCGTCGAGTGCTGCTCCCAG
GAGAAGACGTACACCAAGTTCTTCGGCCTCATCGGCGAGCGCTTCGCCAAGATCAACCGGCTGTGGTGCGACCTC
TTCGAGCAGGCCTTCGCCAAGTACTACGAAACCATCCACCGCTACGAGAACAACAAGCTGCGCAACATCGCCATG
CTCTTCGGCCACATGTTCGCCGAGGACGCGCTCGGCTGGCACTGCCTGTCCGTCATCCACCTGAACGAGGACGAG
ACGACGTCGAGCAGCCGCATCTTCATCAAGATCCTCTTCCAGAGCATCGCCGAGGAGGTCGGCATGCCCAAGCTC
AGGGCCAGGATGGCGGACGCGACGCTGCGGCCCAGCCTCGAGGGCATATTCCCCCGGGACAGCGCGCGCAACGTC
CGGTTCGCCATCAACTACTTCACCAGCATCGGCATGGGCGCCCTGACGGAGGAGATGCGCGAGTTCCTGCAGAGC
ATGCCCAAGCCGGCCTTGCCCGCGCCCGCCGCCGGCGACGACGACTGGGACTGGCGCCGCGTCGAGGCCCAGCGC
CGGAGGGGCATCGACACAGCCCGCCACTTCCAGGCCCTCGACGACGTGCACGGCCTGTTCGATGGCGGCACCCAC
GGCGCGCTCGGCTCCTTTGGCCCCTGCTGA
Gene >Hirsu2|1052
ATGGCATCGGCCAAGGTTGAAATGCCGCGCCGCGAACGCGGCCGCCATCGCGAGGGCGACTCGTACCGTCCGGCC
CGGCCCGGGCGCTCGCCGCCGCCGCCGCCGCCGGTGCGCACCGAGGAGGAGAAGCAGGCGGCGGCCAAGGCCGAG
TACGAGAAGCTGCTCAACATGCGCTCGGGCGGCACTTACATCCCGCCGGCGCGGCTCCGGGCGCTGCAGGCGCAG
ATCACGGACAAGACGAGCAAGGAGTACCAGCGGATGGCGTGGGAGGCGCTCAAGAAGAGCATCAACGGCCTGATC
AACAAGGTCAACACGGCAAACATCAAGCACATCGTGCCCGAGCTCTTCGGCGAGAACCTGATCCGCGGCCGCGGC
CTCTTCTGCCGCTCCATCATGAAGGCCCAGGCGGCCAGCCTGCCCTTCACCCCCATCTACGCGGCCATGGCGGCC
ATCGTCAACTCCAAGCTGCCCCAGGTGGGCGAGCTACTGATCAGGCGGCTCATCATGCAGTTCCGCAAGGGCTTC
AAGCGCAACGACAAGGCCGTCTGCCTGTCCTCGACCACCTTCCTCGCCCACCTCATCAACCACCAGGTGCAGCAC
GAGATGCTGGCCGGCCAGATCCTGCTGCTGCTGCTGCACAAGCCGACGGACGACAGCGTCGAGATCGCCGTCGGC
TTCTGCCGCGAGGTCGGCCAGTACGTCGAGGAGATGCAGCCCTCCATCGCCATGGCCGTCTTCGACCAGTTCAGG
AACATCCTGCACGAGGCCGACATCGACAAGCGCACCCAGTACATGATCGAGGTGCTGTTCCAGGTCCGCAAGGAC
AAGTTCAAGGATAACCCGGCCATCAAGGAGGAGCTGGACCTCGTCGAGGAGGAGGACCAGATCACGCACCAGGTC
AACCTCGAGGGCGACGTCGACGTCCAGGACGGCCTCAACGTCTTCAAGTTCGACCCCGATTGGGAAGACAACGAA
GAGGCCTACAAGAACTTGAGGGCCCAGATCTTGGGCGAGGCGAGCGATGATGATGACGACGACGACGACGCCGAC
GGGGGCGACGACGACGAAAGCTCCGAGGAAGAGGACGAGGCGACAAAGGCGATGGAGATCAAGGACCAGTCCAAC
ACCGACCTGGTGAACCTCAGGAGGACCATCTACCTGACCATCATGTCGAGCGCCGATCCGGAGGAGGCCGTGCAC
AAGCTCATGAAGGTCAACCTGCCCGCCGGCCAGGAGCCGGAGCTGCCCTCGATGATCGTCGAGTGCTGCTCCCAG
GAGAAGACGTACACCAAGTTCTTCGGCCTCATCGGCGAGCGCTTCGCCAAGATCAACCGGCTGTGGTGCGACCTC
TTCGAGCAGGCCTTCGCCAAGTACTACGAAACCATCCACCGCTACGAGAACAACAAGCTGCGCAACATCGCCATG
CTCTTCGGCCACATGTTCGCCGAGGACGCGCTCGGCTGGCACTGCCTGTCCGTCATCCACCTGAACGAGGACGAG
ACGACGTCGAGCAGCCGCATCTTCATCAAGATCCTCTTCCAGAGCATCGCCGAGGAGGTCGGCATGCCCAAGCTC
AGGGCCAGGATGGCGGACGCGACGCTGCGGCCCAGCCTCGAGGGCATATTCCCCCGGGACAGCGCGCGCAACGTC
CGGTTCGCCATCAACTACTTCACCAGCATCGGCATGGGCGCCCTGACGGAGGAGATGCGCGAGTTCCTGCAGAGC
ATGCCCAAGCCGGCCTTGCCCGCGCCCGCCGCCGGCGACGACGACTGGGACTGGCGCCGCGTCGAGGCCCAGCGC
CGGAGGGGCATCGACACAGCCCGCCACTTCCAGGCCCTCGACGACGTGCACGGCCTGTTCGATGGCGGCACCCAC
GGCGCGCTCGGCTCCTTTGGCCCCTGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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