Protein ID | Hirsu2|10516 |
Gene name | |
Location | Contig_86:51..1113 |
Strand | + |
Gene length (bp) | 1062 |
Transcript length (bp) | 990 |
Coding sequence length (bp) | 990 |
Protein length (aa) | 330 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04991 | LicD | LicD family | 8.5E-18 | 114 | 231 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P36044|MNN4_YEAST | Protein MNN4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNN4 PE=4 SV=2 | 64 | 268 | 1.0E-20 |
sp|P40355|YJ31_YEAST | Uncharacterized protein YJR061W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJR061W PE=4 SV=2 | 47 | 224 | 2.0E-18 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1923 | 0.094 | 0.6882 | 0.1445 | 0.2232 | 0.0418 | 0.5181 | 0.2541 | 0.3359 | 0.0092 |
Orthofinder run ID | 4 |
Orthogroup | 4813 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10516 MPSPRALVVAALLAGRGLGWSITPFLARHDAASSSEPAVLLSGRDSPAPDPPSPPAPPGEEAAAPALTPKYFHEP GGSLARGHYDERFFREEMGYDEHRRVLRQLIRSYLATAARHGFETWLAHGTLLGWWWNGRAMPWDYDLDVQVSDA TLRWMAARLNRTEHEFNATDADADSPDADSSGPRRYLLDVNPHHADLTRGDGMNIIDARWIDTANGMFVDITGLR ERDPARPGLWSCKNMHRYASRDLWPMRLTEFEGARARIPYNVDRILADEYGPQCLVTEEHAGHRWDRDIKEWVMM SPDEQQRRHHLVRERKRQQMIRDGRLPAP* |
Coding | >Hirsu2|10516 ATGCCTTCGCCCAGGGCCCTGGTCGTGGCCGCGCTCCTGGCCGGCCGCGGCCTCGGCTGGAGCATCACGCCCTTC TTGGCCCGCCACGACGCCGCCTCCTCCTCCGAGCCGGCCGTGCTGCTGTCCGGCCGCGACTCGCCCGCGCCCGAC CCGCCGTCGCCGCCCGCCCCCCCGGGAGAGGAAGCAGCGGCGCCGGCGCTGACGCCCAAGTACTTCCACGAGCCC GGCGGCAGCCTGGCGCGCGGGCACTACGACGAGCGCTTCTTCCGCGAAGAGATGGGCTACGACGAGCACCGGCGC GTGCTGCGGCAGCTGATCCGCAGCTACCTGGCGACGGCGGCCCGGCACGGCTTCGAGACGTGGCTGGCCCACGGC ACGCTGCTGGGCTGGTGGTGGAACGGCCGGGCCATGCCGTGGGACTACGACCTCGACGTCCAGGTCTCGGACGCG ACGCTGCGCTGGATGGCGGCGCGCCTCAACCGCACCGAGCACGAGTTCAACGCGACCGACGCCGACGCCGACTCG CCCGACGCCGACTCGTCCGGCCCGCGCCGCTACCTGCTCGACGTCAACCCGCACCACGCCGACCTGACGCGCGGC GACGGCATGAACATCATCGACGCCCGCTGGATCGACACGGCCAACGGCATGTTCGTCGACATCACCGGCCTGCGC GAGCGCGACCCGGCCCGCCCCGGCCTCTGGAGCTGCAAGAACATGCACCGCTACGCCAGCCGCGACCTGTGGCCC ATGCGCCTGACCGAGTTCGAGGGCGCCCGCGCCCGCATCCCCTACAACGTCGACCGCATCCTCGCCGACGAGTAC GGGCCCCAGTGCCTCGTCACCGAGGAGCACGCCGGCCACCGCTGGGACCGCGACATCAAGGAATGGGTCATGATG AGCCCCGACGAGCAGCAGCGCCGCCACCACCTGGTCCGCGAGCGCAAGCGCCAGCAGATGATTCGCGACGGCCGC CTGCCCGCCCCCTGA |
Transcript | >Hirsu2|10516 ATGCCTTCGCCCAGGGCCCTGGTCGTGGCCGCGCTCCTGGCCGGCCGCGGCCTCGGCTGGAGCATCACGCCCTTC TTGGCCCGCCACGACGCCGCCTCCTCCTCCGAGCCGGCCGTGCTGCTGTCCGGCCGCGACTCGCCCGCGCCCGAC CCGCCGTCGCCGCCCGCCCCCCCGGGAGAGGAAGCAGCGGCGCCGGCGCTGACGCCCAAGTACTTCCACGAGCCC GGCGGCAGCCTGGCGCGCGGGCACTACGACGAGCGCTTCTTCCGCGAAGAGATGGGCTACGACGAGCACCGGCGC GTGCTGCGGCAGCTGATCCGCAGCTACCTGGCGACGGCGGCCCGGCACGGCTTCGAGACGTGGCTGGCCCACGGC ACGCTGCTGGGCTGGTGGTGGAACGGCCGGGCCATGCCGTGGGACTACGACCTCGACGTCCAGGTCTCGGACGCG ACGCTGCGCTGGATGGCGGCGCGCCTCAACCGCACCGAGCACGAGTTCAACGCGACCGACGCCGACGCCGACTCG CCCGACGCCGACTCGTCCGGCCCGCGCCGCTACCTGCTCGACGTCAACCCGCACCACGCCGACCTGACGCGCGGC GACGGCATGAACATCATCGACGCCCGCTGGATCGACACGGCCAACGGCATGTTCGTCGACATCACCGGCCTGCGC GAGCGCGACCCGGCCCGCCCCGGCCTCTGGAGCTGCAAGAACATGCACCGCTACGCCAGCCGCGACCTGTGGCCC ATGCGCCTGACCGAGTTCGAGGGCGCCCGCGCCCGCATCCCCTACAACGTCGACCGCATCCTCGCCGACGAGTAC GGGCCCCAGTGCCTCGTCACCGAGGAGCACGCCGGCCACCGCTGGGACCGCGACATCAAGGAATGGGTCATGATG AGCCCCGACGAGCAGCAGCGCCGCCACCACCTGGTCCGCGAGCGCAAGCGCCAGCAGATGATTCGCGACGGCCGC CTGCCCGCCCCCTGA |
Gene | >Hirsu2|10516 ATGCCTTCGCCCAGGGCCCTGGTCGTGGCCGCGCTCCTGGCCGGCCGCGGCCTCGGCTGGAGCATCACGCCCTTC TTGGCCCGCCACGACGCCGCCTCCTCCTCCGAGCCGGCCGTGCTGCTGTCCGGCCGCGACTCGCCCGCGCCCGAC CCGCCGTCGCCGCCCGCCCCCCCGGGAGAGGAAGCAGCGGCGCCGGCGCTGACGCCCAAGTACTTCCACGAGCCC GGCGGCAGCCTGGCGCGCGGGCACTACGACGAGCGCTTCTTCCGCGAAGAGATGGGCTACGACGAGCACCGGCGC GTGCTGCGGCAGCTGATCCGCAGCTACCTGGCGACGGCGGCCCGGCACGGCTTCGAGACGTGGCTGGCCCACGGC ACGCTGCTGGGCTGGTGGTGGAACGGCCGGGCCATGCCGTGGGACTACGACCTCGACGTCCAGGTCTCGGACGCG ACGCTGCGCTGGATGGCGGCGCGCCTCAACCGCACCGAGCACGAGTTCAACGCGACCGACGCCGACGCCGACTCG CCCGACGCCGACTCGTCCGGCCCGCGCCGCTACCTGCTCGACGTCAACCCGCACCACGCCGACCTGACGCGCGGC GACGGCATGAACATCATCGACGCCCGCTGGATCGACACGGCCAACGGCATGTTCGTCGACATCACCGGCCTGCGC GAGCGCGACCCGGCCCGCCCCGGCCTCTGGAGCTGCAAGAACATGCACCGCTACGCCAGCCGCGACCTGTGGCCC ATGCGCCTGACCGAGTTCGAGGGCGCCCGCGCCCGCATCCCCTACAACGTCGACCGCATCCTCGCCGACGAGTAC GGGCCCCAGTGCCTCGTCACCGAGGAGCACGCCGGGTCCGTTCTTCCCATCCTCCCCGTGCCGCTCTCGACGCCT GTCTTGCTGACCTGACGGCCCCCTCGGGACAGCCACCGCTGGGACCGCGACATCAAGGAATGGGTCATGATGAGC CCCGACGAGCAGCAGCGCCGCCACCACCTGGTCCGCGAGCGCAAGCGCCAGCAGATGATTCGCGACGGCCGCCTG CCCGCCCCCTGA |