Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1051
Gene name
LocationContig_1217:4648..5202
Strand+
Gene length (bp)554
Transcript length (bp)408
Coding sequence length (bp)408
Protein length (aa) 136

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 2.4E-10 25 89

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1051
MKAAAPLAALAGLAAAAADLAALQKALPACSLVCLVQGVAEHGCAVADFACQCARLEPIIRTVAPCLVRAGCSLE
NITATARVVLDVCKNEVPDSVRVSAPEATAPAAAVSAAAATLWAPCLGGFAFAAAAAVLL*
Coding >Hirsu2|1051
ATGAAGGCCGCCGCCCCCCTCGCGGCGCTCGCCGGCCTCGCCGCCGCCGCCGCCGACCTGGCCGCGCTGCAGAAG
GCGCTGCCGGCGTGCTCGCTCGTGTGCCTCGTCCAGGGCGTCGCCGAACACGGCTGCGCCGTCGCCGACTTCGCC
TGCCAGTGCGCGCGCCTCGAGCCCATCATCCGCACCGTCGCGCCCTGCCTCGTCCGGGCCGGCTGCAGCCTGGAG
AACATCACCGCCACCGCCCGCGTCGTGCTCGACGTCTGCAAAAACGAGGTCCCAGACTCGGTCCGCGTCTCGGCC
CCCGAGGCAACGGCCCCCGCCGCCGCCGTCTCCGCTGCCGCCGCCACGCTTTGGGCGCCTTGCCTAGGTGGCTTT
GCTTTCGCCGCTGCCGCCGCTGTCTTGCTATGA
Transcript >Hirsu2|1051
ATGAAGGCCGCCGCCCCCCTCGCGGCGCTCGCCGGCCTCGCCGCCGCCGCCGCCGACCTGGCCGCGCTGCAGAAG
GCGCTGCCGGCGTGCTCGCTCGTGTGCCTCGTCCAGGGCGTCGCCGAACACGGCTGCGCCGTCGCCGACTTCGCC
TGCCAGTGCGCGCGCCTCGAGCCCATCATCCGCACCGTCGCGCCCTGCCTCGTCCGGGCCGGCTGCAGCCTGGAG
AACATCACCGCCACCGCCCGCGTCGTGCTCGACGTCTGCAAAAACGAGGTCCCAGACTCGGTCCGCGTCTCGGCC
CCCGAGGCAACGGCCCCCGCCGCCGCCGTCTCCGCTGCCGCCGCCACGCTTTGGGCGCCTTGCCTAGGTGGCTTT
GCTTTCGCCGCTGCCGCCGCTGTCTTGCTATGA
Gene >Hirsu2|1051
ATGAAGGCCGCCGCCCCCCTCGCGGCGCTCGCCGGCCTCGCCGCCGCCGCCGCCGACCTGGCCGCGCTGCAGAAG
GCGCTGCCGGCGTGCTCGCTCGTGTGCCTCGTCCAGGGCGTCGCCGAACACGGCTGCGCCGTCGCCGACTTCGCC
TGCCAGTGCGCGCGCCTCGAGCCCATCATCCGCACCGTCGCGCCCTGCCTCGTCCGGGCCGGCTGCAGCCTGGAG
AACATCACCGGTGAGCCCGCCCGCAGCGAACCGCTTCCCTTGCTTCTCCTGCCCCCCTCGGCAAAGTAAAGCGGC
AGAGGGAGATGGAGAAGAGACGTAGTCAGATAAGAATCAATCCGGACTCTGATTTCGCCGTCTTTCCGCCGAGCA
AAAAAGCCACCGCCCGCGTCGTGCTCGACGTCTGCAAAAACGAGGTCCCAGACTCGGTCCGCGTCTCGGCCCCCG
AGGCAACGGCCCCCGCCGCCGCCGTCTCCGCTGCCGCCGCCACGCTTTGGGCGCCTTGCCTAGGTGGCTTTGCTT
TCGCCGCTGCCGCCGCTGTCTTGCTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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