Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|105
Gene name
LocationContig_1014:7275..8325
Strand-
Gene length (bp)1050
Transcript length (bp)1050
Coding sequence length (bp)1050
Protein length (aa) 350

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.5

Transmembrane Domains

Domain # Start End Length
1 12 31 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|105
MATNVDGRATKIALGVFGIFTSLIALVSIVVRQSRRRASRARARAGPKPEPEVVKRDLKKWYRAALDQIVAARVD
KETSTEHGEPVFLSHYASGGHFRHWVLHTHGAKYELRQTGVDGAGRKLYAAAVGPSDFDLEAYRRSVTANYAPEL
GHYFYSMIGWTALTRAQVDEASARAEAGFGPYALLSNNCHDFLQRLAERVVTTRAPDWAWFRSDSLLDSYSYSQR
PALNDWAIYAATRKRHLERSRHYLDGAEQRRVDDVIALLEDMIEQQVLRSVMMQMAGAQQQLLLQDNGGGGGGDG
GGGGGAQLDGGCDGGGGGGGGGDGGGGGGGGGDGGGGGGGGGGGGGGGC*
Coding >Hirsu2|105
ATGGCTACCAATGTCGACGGGCGGGCGACGAAGATTGCGCTCGGTGTTTTTGGCATCTTCACCTCCCTGATCGCT
CTCGTGTCAATCGTCGTTCGCCAGTCGCGAAGGCGGGCCAGTCGGGCCCGGGCCAGGGCCGGGCCGAAGCCGGAG
CCGGAGGTGGTCAAGCGGGACCTGAAGAAGTGGTACCGGGCGGCGCTGGACCAGATCGTGGCGGCGCGGGTGGAC
AAGGAGACGAGCACGGAGCACGGCGAGCCCGTCTTCCTGTCGCACTACGCCAGCGGCGGCCACTTCCGGCACTGG
GTCCTGCACACGCACGGGGCCAAGTACGAGCTGCGGCAGACGGGCGTCGACGGCGCCGGCCGCAAGCTGTACGCG
GCCGCCGTCGGCCCGTCCGACTTCGACCTCGAGGCCTACCGCCGGTCGGTGACGGCCAACTACGCGCCCGAGCTG
GGCCACTACTTCTACAGCATGATCGGCTGGACGGCCCTGACGCGGGCCCAGGTCGACGAGGCGTCGGCCCGCGCC
GAAGCCGGCTTCGGCCCCTACGCCCTCCTCTCCAACAACTGCCACGACTTCCTGCAGCGGCTGGCCGAGCGCGTC
GTCACCACCCGCGCCCCCGACTGGGCCTGGTTCCGCAGCGACAGCCTGCTCGACAGCTACTCCTACTCGCAGCGG
CCGGCCCTCAACGACTGGGCCATCTACGCCGCCACCCGCAAGCGCCACCTCGAGCGCTCCCGCCACTACCTCGAC
GGGGCCGAGCAGCGCCGCGTCGACGACGTCATCGCCCTGCTGGAGGACATGATCGAGCAGCAGGTCCTCCGCTCC
GTCATGATGCAGATGGCCGGCGCCCAGCAGCAGCTGCTGCTGCAGGACAACGGCGGCGGCGGCGGCGGCGACGGA
GGCGGTGGCGGCGGCGCTCAACTGGACGGCGGCTGTGATGGCGGTGGCGGTGGCGGTGGTGGTGGTGATGGCGGG
GGAGGCGGAGGAGGCGGCGGTGACGGCGGCGGAGGAGGCGGAGGAGGCGGCGGCGGGGGAGGCGGAGGATGCTGA
Transcript >Hirsu2|105
ATGGCTACCAATGTCGACGGGCGGGCGACGAAGATTGCGCTCGGTGTTTTTGGCATCTTCACCTCCCTGATCGCT
CTCGTGTCAATCGTCGTTCGCCAGTCGCGAAGGCGGGCCAGTCGGGCCCGGGCCAGGGCCGGGCCGAAGCCGGAG
CCGGAGGTGGTCAAGCGGGACCTGAAGAAGTGGTACCGGGCGGCGCTGGACCAGATCGTGGCGGCGCGGGTGGAC
AAGGAGACGAGCACGGAGCACGGCGAGCCCGTCTTCCTGTCGCACTACGCCAGCGGCGGCCACTTCCGGCACTGG
GTCCTGCACACGCACGGGGCCAAGTACGAGCTGCGGCAGACGGGCGTCGACGGCGCCGGCCGCAAGCTGTACGCG
GCCGCCGTCGGCCCGTCCGACTTCGACCTCGAGGCCTACCGCCGGTCGGTGACGGCCAACTACGCGCCCGAGCTG
GGCCACTACTTCTACAGCATGATCGGCTGGACGGCCCTGACGCGGGCCCAGGTCGACGAGGCGTCGGCCCGCGCC
GAAGCCGGCTTCGGCCCCTACGCCCTCCTCTCCAACAACTGCCACGACTTCCTGCAGCGGCTGGCCGAGCGCGTC
GTCACCACCCGCGCCCCCGACTGGGCCTGGTTCCGCAGCGACAGCCTGCTCGACAGCTACTCCTACTCGCAGCGG
CCGGCCCTCAACGACTGGGCCATCTACGCCGCCACCCGCAAGCGCCACCTCGAGCGCTCCCGCCACTACCTCGAC
GGGGCCGAGCAGCGCCGCGTCGACGACGTCATCGCCCTGCTGGAGGACATGATCGAGCAGCAGGTCCTCCGCTCC
GTCATGATGCAGATGGCCGGCGCCCAGCAGCAGCTGCTGCTGCAGGACAACGGCGGCGGCGGCGGCGGCGACGGA
GGCGGTGGCGGCGGCGCTCAACTGGACGGCGGCTGTGATGGCGGTGGCGGTGGCGGTGGTGGTGGTGATGGCGGG
GGAGGCGGAGGAGGCGGCGGTGACGGCGGCGGAGGAGGCGGAGGAGGCGGCGGCGGGGGAGGCGGAGGATGCTGA
Gene >Hirsu2|105
ATGGCTACCAATGTCGACGGGCGGGCGACGAAGATTGCGCTCGGTGTTTTTGGCATCTTCACCTCCCTGATCGCT
CTCGTGTCAATCGTCGTTCGCCAGTCGCGAAGGCGGGCCAGTCGGGCCCGGGCCAGGGCCGGGCCGAAGCCGGAG
CCGGAGGTGGTCAAGCGGGACCTGAAGAAGTGGTACCGGGCGGCGCTGGACCAGATCGTGGCGGCGCGGGTGGAC
AAGGAGACGAGCACGGAGCACGGCGAGCCCGTCTTCCTGTCGCACTACGCCAGCGGCGGCCACTTCCGGCACTGG
GTCCTGCACACGCACGGGGCCAAGTACGAGCTGCGGCAGACGGGCGTCGACGGCGCCGGCCGCAAGCTGTACGCG
GCCGCCGTCGGCCCGTCCGACTTCGACCTCGAGGCCTACCGCCGGTCGGTGACGGCCAACTACGCGCCCGAGCTG
GGCCACTACTTCTACAGCATGATCGGCTGGACGGCCCTGACGCGGGCCCAGGTCGACGAGGCGTCGGCCCGCGCC
GAAGCCGGCTTCGGCCCCTACGCCCTCCTCTCCAACAACTGCCACGACTTCCTGCAGCGGCTGGCCGAGCGCGTC
GTCACCACCCGCGCCCCCGACTGGGCCTGGTTCCGCAGCGACAGCCTGCTCGACAGCTACTCCTACTCGCAGCGG
CCGGCCCTCAACGACTGGGCCATCTACGCCGCCACCCGCAAGCGCCACCTCGAGCGCTCCCGCCACTACCTCGAC
GGGGCCGAGCAGCGCCGCGTCGACGACGTCATCGCCCTGCTGGAGGACATGATCGAGCAGCAGGTCCTCCGCTCC
GTCATGATGCAGATGGCCGGCGCCCAGCAGCAGCTGCTGCTGCAGGACAACGGCGGCGGCGGCGGCGGCGACGGA
GGCGGTGGCGGCGGCGCTCAACTGGACGGCGGCTGTGATGGCGGTGGCGGTGGCGGTGGTGGTGGTGATGGCGGG
GGAGGCGGAGGAGGCGGCGGTGACGGCGGCGGAGGAGGCGGAGGAGGCGGCGGCGGGGGAGGCGGAGGATGCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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