Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10499
Gene name
LocationContig_855:10664..11048
Strand+
Gene length (bp)384
Transcript length (bp)303
Coding sequence length (bp)303
Protein length (aa) 101

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00026 Asp Eukaryotic aspartyl protease 3.1E-04 75 100

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.2084 0.0353 0.9016 0.1888 0.2159 0.108 0.4445 0.281 0.1774 0.0057

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 5 24 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7469
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|10499 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10499
MRPLLLWAPVAAAAAAPLAGVFSLEAARATGETRDFAADMAAARLRWGPAEQPPGFALTQGEGRVVAQPLAHDQA
YIAEVALGSPPQMVKLALDTGSADV*
Coding >Hirsu2|10499
ATGCGTCCTCTCCTCCTTTGGGCCCCCGTGGCCGCGGCCGCGGCCGCGCCGCTCGCGGGCGTCTTCTCGCTCGAG
GCGGCCCGGGCGACGGGCGAGACGCGCGACTTCGCCGCCGACATGGCCGCCGCGAGGCTCCGCTGGGGGCCAGCC
GAGCAGCCGCCGGGCTTCGCGCTGACGCAGGGTGAGGGCCGGGTGGTGGCGCAGCCGCTGGCGCACGACCAGGCC
TACATCGCCGAGGTCGCGCTCGGCTCGCCGCCGCAGATGGTCAAGCTGGCGCTCGACACCGGGTCGGCGGACGTG
TGA
Transcript >Hirsu2|10499
ATGCGTCCTCTCCTCCTTTGGGCCCCCGTGGCCGCGGCCGCGGCCGCGCCGCTCGCGGGCGTCTTCTCGCTCGAG
GCGGCCCGGGCGACGGGCGAGACGCGCGACTTCGCCGCCGACATGGCCGCCGCGAGGCTCCGCTGGGGGCCAGCC
GAGCAGCCGCCGGGCTTCGCGCTGACGCAGGGTGAGGGCCGGGTGGTGGCGCAGCCGCTGGCGCACGACCAGGCC
TACATCGCCGAGGTCGCGCTCGGCTCGCCGCCGCAGATGGTCAAGCTGGCGCTCGACACCGGGTCGGCGGACGTG
TGA
Gene >Hirsu2|10499
ATGCGTCCTCTCCTCCTTTGGGCCCCCGTGGCCGCGGCCGCGGCCGCGCCGCTCGCGGGCGTCTTCTCGCTCGAG
GCGGCCCGGGCGACGGGCGAGACGCGCGACTTCGCCGCCGACATGGCCGCCGCGAGGCTCCGCTGGGGGCCAGCC
GAGCAGCCGCCGGGCTTCGCGCTGACGCAGGGTGGTGAGTCCCCGCTGTGAGGATGAGGATTTCCGGCGGAGAGA
GAGGGAGAGTTGCTCAGAGTATCCCTGGGGGGGATGATAGAGGGCCGGGTGGTGGCGCAGCCGCTGGCGCACGAC
CAGGCCTACATCGCCGAGGTCGCGCTCGGCTCGCCGCCGCAGATGGTCAAGCTGGCGCTCGACACCGGGTCGGCG
GACGTGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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