Protein ID | Hirsu2|10499 |
Gene name | |
Location | Contig_855:10664..11048 |
Strand | + |
Gene length (bp) | 384 |
Transcript length (bp) | 303 |
Coding sequence length (bp) | 303 |
Protein length (aa) | 101 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00026 | Asp | Eukaryotic aspartyl protease | 3.1E-04 | 75 | 100 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.2084 | 0.0353 | 0.9016 | 0.1888 | 0.2159 | 0.108 | 0.4445 | 0.281 | 0.1774 | 0.0057 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 5 | 24 | 19 |
Orthofinder run ID | 4 |
Orthogroup | 7469 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|10499 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10499 MRPLLLWAPVAAAAAAPLAGVFSLEAARATGETRDFAADMAAARLRWGPAEQPPGFALTQGEGRVVAQPLAHDQA YIAEVALGSPPQMVKLALDTGSADV* |
Coding | >Hirsu2|10499 ATGCGTCCTCTCCTCCTTTGGGCCCCCGTGGCCGCGGCCGCGGCCGCGCCGCTCGCGGGCGTCTTCTCGCTCGAG GCGGCCCGGGCGACGGGCGAGACGCGCGACTTCGCCGCCGACATGGCCGCCGCGAGGCTCCGCTGGGGGCCAGCC GAGCAGCCGCCGGGCTTCGCGCTGACGCAGGGTGAGGGCCGGGTGGTGGCGCAGCCGCTGGCGCACGACCAGGCC TACATCGCCGAGGTCGCGCTCGGCTCGCCGCCGCAGATGGTCAAGCTGGCGCTCGACACCGGGTCGGCGGACGTG TGA |
Transcript | >Hirsu2|10499 ATGCGTCCTCTCCTCCTTTGGGCCCCCGTGGCCGCGGCCGCGGCCGCGCCGCTCGCGGGCGTCTTCTCGCTCGAG GCGGCCCGGGCGACGGGCGAGACGCGCGACTTCGCCGCCGACATGGCCGCCGCGAGGCTCCGCTGGGGGCCAGCC GAGCAGCCGCCGGGCTTCGCGCTGACGCAGGGTGAGGGCCGGGTGGTGGCGCAGCCGCTGGCGCACGACCAGGCC TACATCGCCGAGGTCGCGCTCGGCTCGCCGCCGCAGATGGTCAAGCTGGCGCTCGACACCGGGTCGGCGGACGTG TGA |
Gene | >Hirsu2|10499 ATGCGTCCTCTCCTCCTTTGGGCCCCCGTGGCCGCGGCCGCGGCCGCGCCGCTCGCGGGCGTCTTCTCGCTCGAG GCGGCCCGGGCGACGGGCGAGACGCGCGACTTCGCCGCCGACATGGCCGCCGCGAGGCTCCGCTGGGGGCCAGCC GAGCAGCCGCCGGGCTTCGCGCTGACGCAGGGTGGTGAGTCCCCGCTGTGAGGATGAGGATTTCCGGCGGAGAGA GAGGGAGAGTTGCTCAGAGTATCCCTGGGGGGGATGATAGAGGGCCGGGTGGTGGCGCAGCCGCTGGCGCACGAC CAGGCCTACATCGCCGAGGTCGCGCTCGGCTCGCCGCCGCAGATGGTCAAGCTGGCGCTCGACACCGGGTCGGCG GACGTGTGA |