Protein ID | Hirsu2|1049 |
Gene name | |
Location | Contig_1217:14..356 |
Strand | + |
Gene length (bp) | 342 |
Transcript length (bp) | 342 |
Coding sequence length (bp) | 342 |
Protein length (aa) | 114 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Mitochondrion | Mitochondrial transit peptide | 0.5711 | 0.2868 | 0.1132 | 0.4198 | 0.689 | 0.2163 | 0.3836 | 0.3448 | 0.4679 | 0.2955 |
Orthofinder run ID | 4 |
Orthogroup | 1257 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1049 LFGRPSSATAGPQVPILPDNYSSAARGPADAPGHGPAAPEVSIVAADPDNVLPGAPLSAMEGISLDSVELKFVHE HAHHPGPPADSQEHSGGMIRDLWKGMVDDVLGPARKTA* |
Coding | >Hirsu2|1049 CTGTTCGGCCGCCCCAGCTCCGCCACCGCCGGCCCCCAGGTCCCCATCCTGCCGGACAACTACTCTTCCGCCGCC CGCGGCCCCGCCGACGCGCCCGGCCACGGCCCGGCCGCGCCCGAGGTCTCCATCGTCGCCGCCGACCCGGACAAC GTCCTGCCCGGCGCGCCCCTGTCCGCCATGGAGGGCATCAGCCTCGACAGCGTCGAGCTCAAGTTCGTCCACGAG CACGCCCACCACCCCGGCCCGCCCGCCGACAGCCAGGAACACAGCGGCGGCATGATCCGCGACCTGTGGAAGGGC ATGGTCGACGACGTCCTCGGCCCCGCTCGCAAGACTGCCTGA |
Transcript | >Hirsu2|1049 CTGTTCGGCCGCCCCAGCTCCGCCACCGCCGGCCCCCAGGTCCCCATCCTGCCGGACAACTACTCTTCCGCCGCC CGCGGCCCCGCCGACGCGCCCGGCCACGGCCCGGCCGCGCCCGAGGTCTCCATCGTCGCCGCCGACCCGGACAAC GTCCTGCCCGGCGCGCCCCTGTCCGCCATGGAGGGCATCAGCCTCGACAGCGTCGAGCTCAAGTTCGTCCACGAG CACGCCCACCACCCCGGCCCGCCCGCCGACAGCCAGGAACACAGCGGCGGCATGATCCGCGACCTGTGGAAGGGC ATGGTCGACGACGTCCTCGGCCCCGCTCGCAAGACTGCCTGA |
Gene | >Hirsu2|1049 CTGTTCGGCCGCCCCAGCTCCGCCACCGCCGGCCCCCAGGTCCCCATCCTGCCGGACAACTACTCTTCCGCCGCC CGCGGCCCCGCCGACGCGCCCGGCCACGGCCCGGCCGCGCCCGAGGTCTCCATCGTCGCCGCCGACCCGGACAAC GTCCTGCCCGGCGCGCCCCTGTCCGCCATGGAGGGCATCAGCCTCGACAGCGTCGAGCTCAAGTTCGTCCACGAG CACGCCCACCACCCCGGCCCGCCCGCCGACAGCCAGGAACACAGCGGCGGCATGATCCGCGACCTGTGGAAGGGC ATGGTCGACGACGTCCTCGGCCCCGCTCGCAAGACTGCCTGA |