Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1049
Gene name
LocationContig_1217:14..356
Strand+
Gene length (bp)342
Transcript length (bp)342
Coding sequence length (bp)342
Protein length (aa) 114

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Mitochondrion Mitochondrial transit peptide 0.5711 0.2868 0.1132 0.4198 0.689 0.2163 0.3836 0.3448 0.4679 0.2955

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1257
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7889
Ophiocordyceps australis map64 (Brazil) OphauB2|6398
Ophiocordyceps camponoti-floridani Ophcf2|01970
Ophiocordyceps camponoti-rufipedis Ophun1|7151
Ophiocordyceps kimflemingae Ophio5|4760
Ophiocordyceps subramaniannii Hirsu2|1049 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1049
LFGRPSSATAGPQVPILPDNYSSAARGPADAPGHGPAAPEVSIVAADPDNVLPGAPLSAMEGISLDSVELKFVHE
HAHHPGPPADSQEHSGGMIRDLWKGMVDDVLGPARKTA*
Coding >Hirsu2|1049
CTGTTCGGCCGCCCCAGCTCCGCCACCGCCGGCCCCCAGGTCCCCATCCTGCCGGACAACTACTCTTCCGCCGCC
CGCGGCCCCGCCGACGCGCCCGGCCACGGCCCGGCCGCGCCCGAGGTCTCCATCGTCGCCGCCGACCCGGACAAC
GTCCTGCCCGGCGCGCCCCTGTCCGCCATGGAGGGCATCAGCCTCGACAGCGTCGAGCTCAAGTTCGTCCACGAG
CACGCCCACCACCCCGGCCCGCCCGCCGACAGCCAGGAACACAGCGGCGGCATGATCCGCGACCTGTGGAAGGGC
ATGGTCGACGACGTCCTCGGCCCCGCTCGCAAGACTGCCTGA
Transcript >Hirsu2|1049
CTGTTCGGCCGCCCCAGCTCCGCCACCGCCGGCCCCCAGGTCCCCATCCTGCCGGACAACTACTCTTCCGCCGCC
CGCGGCCCCGCCGACGCGCCCGGCCACGGCCCGGCCGCGCCCGAGGTCTCCATCGTCGCCGCCGACCCGGACAAC
GTCCTGCCCGGCGCGCCCCTGTCCGCCATGGAGGGCATCAGCCTCGACAGCGTCGAGCTCAAGTTCGTCCACGAG
CACGCCCACCACCCCGGCCCGCCCGCCGACAGCCAGGAACACAGCGGCGGCATGATCCGCGACCTGTGGAAGGGC
ATGGTCGACGACGTCCTCGGCCCCGCTCGCAAGACTGCCTGA
Gene >Hirsu2|1049
CTGTTCGGCCGCCCCAGCTCCGCCACCGCCGGCCCCCAGGTCCCCATCCTGCCGGACAACTACTCTTCCGCCGCC
CGCGGCCCCGCCGACGCGCCCGGCCACGGCCCGGCCGCGCCCGAGGTCTCCATCGTCGCCGCCGACCCGGACAAC
GTCCTGCCCGGCGCGCCCCTGTCCGCCATGGAGGGCATCAGCCTCGACAGCGTCGAGCTCAAGTTCGTCCACGAG
CACGCCCACCACCCCGGCCCGCCCGCCGACAGCCAGGAACACAGCGGCGGCATGATCCGCGACCTGTGGAAGGGC
ATGGTCGACGACGTCCTCGGCCCCGCTCGCAAGACTGCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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