Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10487
Gene name
LocationContig_853:8771..10354
Strand+
Gene length (bp)1583
Transcript length (bp)1521
Coding sequence length (bp)1521
Protein length (aa) 507

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 1.9E-15 434 504

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10487
MKKLPFKPTALRRASLPKPAEADGDATERAGGDDDDDLAIFRRSKEMEPIMAADRERRLKKRLQKQGDDRRRRPS
ALPAKRPHQDGADADGSDDGGYDASHVDDDGHDASHIDVADEQDFLAQQDIPDEDVPRTDDVNRFSSSRLVTPPA
SKRSRLDSTPSKISIISLKEAGAAADDSPSTRLAKRTPDRAASATKSVKVISLDSEDDDDDDSDDDDDDDDDVQE
IVSPRNRRDGRNDLADDANAAPVPPPPPIEDDEFGEYVRMAEEQRARDYAMLRGGGTDKARTREAVDILVTSSVA
NARPCRMRFLFDKPLRLVRNSWLALQRSRGVQLELAQDDDVILTWRRNKVYPFSTLLNLGIRPHVDGQVQVDGRD
RAGLTDNRAGVHMEAWTPALFHEMEREEEARRRREAGESSEAEASEAEAAEARAAEVKIRVILRARQLDDVRLTV
RPETTVETLLTGFRAQRGVGSDEAVSLWFDGERLEEHVTMEAAEIDDLDTMEVHVK*
Coding >Hirsu2|10487
ATGAAGAAACTCCCGTTCAAACCGACAGCCCTGCGCAGGGCCTCACTGCCCAAGCCGGCCGAGGCCGATGGCGAC
GCCACGGAGCGCGCCGGCGGTGACGACGACGACGACCTTGCGATTTTCCGGAGATCCAAAGAAATGGAGCCCATC
ATGGCGGCCGACCGCGAGCGCAGGCTGAAGAAGAGGCTGCAGAAACAAGGCGACGACCGACGGCGACGACCGTCC
GCGCTACCGGCCAAGCGACCACATCAAGACGGCGCCGACGCCGATGGAAGCGATGACGGCGGCTACGACGCGTCG
CATGTCGATGACGACGGCCACGACGCGTCGCATATCGATGTCGCGGACGAGCAAGATTTCCTCGCGCAGCAAGAC
ATACCGGACGAGGACGTGCCCAGAACAGACGACGTCAACCGCTTCAGCAGCAGCAGGCTCGTTACGCCGCCGGCA
TCGAAACGCTCGAGGCTTGATTCGACGCCGTCCAAGATATCCATCATAAGTCTGAAGGAGGCAGGCGCCGCGGCG
GACGACTCGCCGTCGACGCGACTGGCGAAGAGGACACCCGATAGGGCTGCCTCCGCGACGAAGAGCGTCAAAGTC
ATTTCCCTCGACTCGGAAGACGACGACGATGACGATAGCGACGACGACGACGACGACGACGACGACGTGCAAGAG
ATCGTCTCCCCGAGGAATCGGCGGGACGGCCGCAATGACTTGGCCGACGACGCCAACGCGGCTCCCGTGCCGCCG
CCGCCGCCGATAGAAGACGACGAGTTCGGCGAATACGTCCGCATGGCGGAGGAGCAGCGTGCGCGCGACTACGCC
ATGCTGCGGGGCGGCGGGACGGACAAGGCGCGCACGCGCGAGGCGGTCGACATCTTGGTGACGTCGAGCGTGGCC
AACGCAAGGCCGTGTCGGATGAGGTTCCTCTTCGACAAGCCGCTGCGGCTGGTGCGCAACAGCTGGCTGGCGCTG
CAGCGGTCGCGCGGGGTGCAGCTGGAGCTGGCGCAGGACGACGACGTGATCCTCACCTGGCGCCGGAACAAGGTC
TACCCCTTCTCGACGCTGCTCAACCTGGGCATCCGGCCGCACGTCGACGGACAGGTCCAGGTGGACGGCCGCGAC
CGGGCCGGGCTGACGGACAACCGGGCGGGCGTCCACATGGAGGCCTGGACGCCGGCGCTGTTCCACGAGATGGAG
CGCGAGGAGGAGGCGCGGCGGCGGCGGGAGGCGGGCGAGTCGTCGGAGGCGGAGGCGTCGGAGGCGGAGGCGGCC
GAGGCGCGGGCGGCCGAGGTCAAGATCCGGGTCATCCTGCGGGCGCGGCAGCTGGACGACGTACGGCTGACGGTC
CGGCCGGAGACGACGGTGGAGACGCTGCTGACCGGCTTCCGCGCGCAGCGGGGCGTCGGCTCCGACGAGGCCGTC
AGCCTGTGGTTCGACGGCGAGCGGCTGGAGGAGCACGTGACGATGGAGGCGGCCGAGATTGACGACCTGGACACG
ATGGAGGTGCACGTCAAGTGA
Transcript >Hirsu2|10487
ATGAAGAAACTCCCGTTCAAACCGACAGCCCTGCGCAGGGCCTCACTGCCCAAGCCGGCCGAGGCCGATGGCGAC
GCCACGGAGCGCGCCGGCGGTGACGACGACGACGACCTTGCGATTTTCCGGAGATCCAAAGAAATGGAGCCCATC
ATGGCGGCCGACCGCGAGCGCAGGCTGAAGAAGAGGCTGCAGAAACAAGGCGACGACCGACGGCGACGACCGTCC
GCGCTACCGGCCAAGCGACCACATCAAGACGGCGCCGACGCCGATGGAAGCGATGACGGCGGCTACGACGCGTCG
CATGTCGATGACGACGGCCACGACGCGTCGCATATCGATGTCGCGGACGAGCAAGATTTCCTCGCGCAGCAAGAC
ATACCGGACGAGGACGTGCCCAGAACAGACGACGTCAACCGCTTCAGCAGCAGCAGGCTCGTTACGCCGCCGGCA
TCGAAACGCTCGAGGCTTGATTCGACGCCGTCCAAGATATCCATCATAAGTCTGAAGGAGGCAGGCGCCGCGGCG
GACGACTCGCCGTCGACGCGACTGGCGAAGAGGACACCCGATAGGGCTGCCTCCGCGACGAAGAGCGTCAAAGTC
ATTTCCCTCGACTCGGAAGACGACGACGATGACGATAGCGACGACGACGACGACGACGACGACGACGTGCAAGAG
ATCGTCTCCCCGAGGAATCGGCGGGACGGCCGCAATGACTTGGCCGACGACGCCAACGCGGCTCCCGTGCCGCCG
CCGCCGCCGATAGAAGACGACGAGTTCGGCGAATACGTCCGCATGGCGGAGGAGCAGCGTGCGCGCGACTACGCC
ATGCTGCGGGGCGGCGGGACGGACAAGGCGCGCACGCGCGAGGCGGTCGACATCTTGGTGACGTCGAGCGTGGCC
AACGCAAGGCCGTGTCGGATGAGGTTCCTCTTCGACAAGCCGCTGCGGCTGGTGCGCAACAGCTGGCTGGCGCTG
CAGCGGTCGCGCGGGGTGCAGCTGGAGCTGGCGCAGGACGACGACGTGATCCTCACCTGGCGCCGGAACAAGGTC
TACCCCTTCTCGACGCTGCTCAACCTGGGCATCCGGCCGCACGTCGACGGACAGGTCCAGGTGGACGGCCGCGAC
CGGGCCGGGCTGACGGACAACCGGGCGGGCGTCCACATGGAGGCCTGGACGCCGGCGCTGTTCCACGAGATGGAG
CGCGAGGAGGAGGCGCGGCGGCGGCGGGAGGCGGGCGAGTCGTCGGAGGCGGAGGCGTCGGAGGCGGAGGCGGCC
GAGGCGCGGGCGGCCGAGGTCAAGATCCGGGTCATCCTGCGGGCGCGGCAGCTGGACGACGTACGGCTGACGGTC
CGGCCGGAGACGACGGTGGAGACGCTGCTGACCGGCTTCCGCGCGCAGCGGGGCGTCGGCTCCGACGAGGCCGTC
AGCCTGTGGTTCGACGGCGAGCGGCTGGAGGAGCACGTGACGATGGAGGCGGCCGAGATTGACGACCTGGACACG
ATGGAGGTGCACGTCAAGTGA
Gene >Hirsu2|10487
ATGAAGAAACTCCCGTTCAAACCGACAGCCCTGCGCAGGGCCTCACTGCCCAAGCCGGCCGAGGCCGATGGCGAC
GCCACGGAGCGCGCCGGCGGTGACGACGACGACGACCTTGCGATTTTCCGGAGATCCAAAGAAATGGAGCCCATC
ATGGCGGCCGACCGCGAGCGCAGGCTGAAGAAGAGGCTGCAGAAACAAGGCGACGACCGACGGCGACGACCGTCC
GCGCTACCGGCCAAGCGACCACATCAAGACGGCGCCGACGCCGATGGAAGCGATGACGGCGGCTACGACGCGTCG
CATGTCGATGACGACGGCCACGACGCGTCGCATATCGATGTCGCGGACGAGCAAGATTTCCTCGCGCAGCAAGAC
ATACCGGACGAGGACGTGCCCAGAACAGACGACGTCAACCGCTTCAGGTATGGCAGCCTGGATCTGTTCTGAGTC
GCACAAGGCCCGTGTGGCTGACTCGCGTGCCCAGCAGCAGCAGGCTCGTTACGCCGCCGGCATCGAAACGCTCGA
GGCTTGATTCGACGCCGTCCAAGATATCCATCATAAGTCTGAAGGAGGCAGGCGCCGCGGCGGACGACTCGCCGT
CGACGCGACTGGCGAAGAGGACACCCGATAGGGCTGCCTCCGCGACGAAGAGCGTCAAAGTCATTTCCCTCGACT
CGGAAGACGACGACGATGACGATAGCGACGACGACGACGACGACGACGACGACGTGCAAGAGATCGTCTCCCCGA
GGAATCGGCGGGACGGCCGCAATGACTTGGCCGACGACGCCAACGCGGCTCCCGTGCCGCCGCCGCCGCCGATAG
AAGACGACGAGTTCGGCGAATACGTCCGCATGGCGGAGGAGCAGCGTGCGCGCGACTACGCCATGCTGCGGGGCG
GCGGGACGGACAAGGCGCGCACGCGCGAGGCGGTCGACATCTTGGTGACGTCGAGCGTGGCCAACGCAAGGCCGT
GTCGGATGAGGTTCCTCTTCGACAAGCCGCTGCGGCTGGTGCGCAACAGCTGGCTGGCGCTGCAGCGGTCGCGCG
GGGTGCAGCTGGAGCTGGCGCAGGACGACGACGTGATCCTCACCTGGCGCCGGAACAAGGTCTACCCCTTCTCGA
CGCTGCTCAACCTGGGCATCCGGCCGCACGTCGACGGACAGGTCCAGGTGGACGGCCGCGACCGGGCCGGGCTGA
CGGACAACCGGGCGGGCGTCCACATGGAGGCCTGGACGCCGGCGCTGTTCCACGAGATGGAGCGCGAGGAGGAGG
CGCGGCGGCGGCGGGAGGCGGGCGAGTCGTCGGAGGCGGAGGCGTCGGAGGCGGAGGCGGCCGAGGCGCGGGCGG
CCGAGGTCAAGATCCGGGTCATCCTGCGGGCGCGGCAGCTGGACGACGTACGGCTGACGGTCCGGCCGGAGACGA
CGGTGGAGACGCTGCTGACCGGCTTCCGCGCGCAGCGGGGCGTCGGCTCCGACGAGGCCGTCAGCCTGTGGTTCG
ACGGCGAGCGGCTGGAGGAGCACGTGACGATGGAGGCGGCCGAGATTGACGACCTGGACACGATGGAGGTGCACG
TCAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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