Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1048
Gene name
LocationContig_1216:7623..7929
Strand+
Gene length (bp)306
Transcript length (bp)219
Coding sequence length (bp)219
Protein length (aa) 73

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.4203 0.3216 0.8459 0.0488 0.2901 0.0839 0.325 0.0398 0.2948 0.0032

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4812
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|00921
Ophiocordyceps camponoti-rufipedis Ophun1|510
Ophiocordyceps kimflemingae Ophio5|6015
Ophiocordyceps subramaniannii Hirsu2|1048 (this protein)
Ophiocordyceps subramaniannii Hirsu2|8898

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1048
MEGRIDWAPALVAVGILRYHGVRMCMGGEAAFAYYNALFIDYDEYWKSSWTGTSTRRRRACSAPRASSGRAW*
Coding >Hirsu2|1048
ATGGAGGGCAGAATCGACTGGGCGCCGGCCCTGGTCGCCGTCGGGATCCTGCGGTACCACGGGGTGCGGATGTGC
ATGGGCGGCGAGGCGGCGTTTGCCTACTACAACGCGCTCTTCATCGACTACGACGAGTACTGGAAATCGTCGTGG
ACCGGGACCAGTACACGACGGCGCCGGGCCTGCTCTGCGCCTCGGGCCTCTTCCGGCCGAGCGTGGTGA
Transcript >Hirsu2|1048
ATGGAGGGCAGAATCGACTGGGCGCCGGCCCTGGTCGCCGTCGGGATCCTGCGGTACCACGGGGTGCGGATGTGC
ATGGGCGGCGAGGCGGCGTTTGCCTACTACAACGCGCTCTTCATCGACTACGACGAGTACTGGAAATCGTCGTGG
ACCGGGACCAGTACACGACGGCGCCGGGCCTGCTCTGCGCCTCGGGCCTCTTCCGGCCGAGCGTGGTGA
Gene >Hirsu2|1048
ATGGAGGGCAGAATCGACTGGGCGCCGGCCCTGGTCGCCGTCGGGATCCTGCGGTACCACGGGGTGCGGATGTGC
ATGGGCGGCGAGGCGGCGTTTGCCTACTACAACGCGCTCTTCATCGACTACGACGAGTGGGAAGGCCCGGTGCGT
CTCTTCCTCCCTCCGGCCCGGCCTCCTTTTGCATTTCTCTCGAGGCTGACCGGGGAAAAAACGAGCAGGTACTGG
AAATCGTCGTGGACCGGGACCAGTACACGACGGCGCCGGGCCTGCTCTGCGCCTCGGGCCTCTTCCGGCCGAGCG
TGGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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