Protein ID | Hirsu2|10427 |
Gene name | |
Location | Contig_84:40027..40852 |
Strand | + |
Gene length (bp) | 825 |
Transcript length (bp) | 825 |
Coding sequence length (bp) | 825 |
Protein length (aa) | 275 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF14681 | UPRTase | Uracil phosphoribosyltransferase | 3.5E-30 | 75 | 270 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | 0.5918 | 0.6328 | 0.101 | 0.1347 | 0.1133 | 0.0131 | 0.048 | 0.1003 | 0.0581 | 0.0233 |
Orthofinder run ID | 4 |
Orthogroup | 4807 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10427 MDAALAKAIDNSNGGLVARQVLLPDSVRPRLDETMLPRVRLSDPDLMQSILDDRNKHVDQKPRTSGRRVLHATGT TAAQLLMSPSRDASIFGPTLGKAHRNIGRYLATEHLSHVLGLEEYRIRHVQGHEISGHRLKDESQTAIIAMMRGG LGLAEGIFNVFPSTSFVHAHSASGIQPQDLQGRSAVVLVDSVVNTGSSLLEHLQRVRQLSPKTCIVVVAGVVQAK TLDDGHALALALDQYDVRRLIMLRRSDNEFKGSKATDTGNRLFNTTHLD* |
Coding | >Hirsu2|10427 ATGGATGCGGCTCTGGCAAAGGCCATCGATAACAGCAACGGCGGTCTTGTTGCGCGACAGGTCCTACTCCCCGAC AGCGTGAGGCCGCGACTGGACGAGACGATGCTACCTCGAGTCCGACTCAGCGATCCTGATCTCATGCAGTCGATT CTTGACGACCGCAACAAGCACGTGGATCAGAAGCCCAGAACGTCCGGTCGACGAGTGCTGCATGCCACGGGCACG ACTGCAGCACAGCTGCTGATGTCGCCCTCACGCGATGCCTCCATTTTCGGACCGACGCTCGGAAAGGCGCATCGC AATATCGGTCGATACCTGGCTACCGAGCATCTGTCCCATGTTCTCGGTCTGGAGGAGTACAGGATTCGCCATGTC CAAGGTCACGAAATCAGCGGCCATCGCCTCAAGGATGAGAGCCAGACTGCGATCATCGCGATGATGCGAGGCGGC CTGGGACTAGCCGAAGGAATCTTCAACGTTTTCCCGAGCACCTCGTTCGTTCACGCCCACTCTGCCTCGGGCATC CAGCCGCAAGACTTGCAGGGCCGGAGCGCAGTGGTGCTGGTCGACTCGGTCGTCAATACCGGGTCAAGTCTGCTG GAGCATCTACAGCGCGTTCGTCAGCTTAGTCCCAAGACGTGCATCGTGGTCGTGGCGGGAGTGGTGCAGGCCAAG ACGCTTGACGATGGACACGCGCTGGCTCTCGCTCTGGACCAGTACGACGTGCGGCGCCTGATTATGCTTCGGCGG TCCGACAACGAGTTCAAAGGGAGCAAGGCAACGGATACGGGCAACCGGCTGTTCAACACGACGCATTTGGACTGA |
Transcript | >Hirsu2|10427 ATGGATGCGGCTCTGGCAAAGGCCATCGATAACAGCAACGGCGGTCTTGTTGCGCGACAGGTCCTACTCCCCGAC AGCGTGAGGCCGCGACTGGACGAGACGATGCTACCTCGAGTCCGACTCAGCGATCCTGATCTCATGCAGTCGATT CTTGACGACCGCAACAAGCACGTGGATCAGAAGCCCAGAACGTCCGGTCGACGAGTGCTGCATGCCACGGGCACG ACTGCAGCACAGCTGCTGATGTCGCCCTCACGCGATGCCTCCATTTTCGGACCGACGCTCGGAAAGGCGCATCGC AATATCGGTCGATACCTGGCTACCGAGCATCTGTCCCATGTTCTCGGTCTGGAGGAGTACAGGATTCGCCATGTC CAAGGTCACGAAATCAGCGGCCATCGCCTCAAGGATGAGAGCCAGACTGCGATCATCGCGATGATGCGAGGCGGC CTGGGACTAGCCGAAGGAATCTTCAACGTTTTCCCGAGCACCTCGTTCGTTCACGCCCACTCTGCCTCGGGCATC CAGCCGCAAGACTTGCAGGGCCGGAGCGCAGTGGTGCTGGTCGACTCGGTCGTCAATACCGGGTCAAGTCTGCTG GAGCATCTACAGCGCGTTCGTCAGCTTAGTCCCAAGACGTGCATCGTGGTCGTGGCGGGAGTGGTGCAGGCCAAG ACGCTTGACGATGGACACGCGCTGGCTCTCGCTCTGGACCAGTACGACGTGCGGCGCCTGATTATGCTTCGGCGG TCCGACAACGAGTTCAAAGGGAGCAAGGCAACGGATACGGGCAACCGGCTGTTCAACACGACGCATTTGGACTGA |
Gene | >Hirsu2|10427 ATGGATGCGGCTCTGGCAAAGGCCATCGATAACAGCAACGGCGGTCTTGTTGCGCGACAGGTCCTACTCCCCGAC AGCGTGAGGCCGCGACTGGACGAGACGATGCTACCTCGAGTCCGACTCAGCGATCCTGATCTCATGCAGTCGATT CTTGACGACCGCAACAAGCACGTGGATCAGAAGCCCAGAACGTCCGGTCGACGAGTGCTGCATGCCACGGGCACG ACTGCAGCACAGCTGCTGATGTCGCCCTCACGCGATGCCTCCATTTTCGGACCGACGCTCGGAAAGGCGCATCGC AATATCGGTCGATACCTGGCTACCGAGCATCTGTCCCATGTTCTCGGTCTGGAGGAGTACAGGATTCGCCATGTC CAAGGTCACGAAATCAGCGGCCATCGCCTCAAGGATGAGAGCCAGACTGCGATCATCGCGATGATGCGAGGCGGC CTGGGACTAGCCGAAGGAATCTTCAACGTTTTCCCGAGCACCTCGTTCGTTCACGCCCACTCTGCCTCGGGCATC CAGCCGCAAGACTTGCAGGGCCGGAGCGCAGTGGTGCTGGTCGACTCGGTCGTCAATACCGGGTCAAGTCTGCTG GAGCATCTACAGCGCGTTCGTCAGCTTAGTCCCAAGACGTGCATCGTGGTCGTGGCGGGAGTGGTGCAGGCCAAG ACGCTTGACGATGGACACGCGCTGGCTCTCGCTCTGGACCAGTACGACGTGCGGCGCCTGATTATGCTTCGGCGG TCCGACAACGAGTTCAAAGGGAGCAAGGCAACGGATACGGGCAACCGGCTGTTCAACACGACGCATTTGGACTGA |