Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10422
Gene name
LocationContig_84:20715..22242
Strand+
Gene length (bp)1527
Transcript length (bp)1281
Coding sequence length (bp)1281
Protein length (aa) 427

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 69 0.5

Transmembrane Domains

Domain # Start End Length
1 34 56 22
2 105 127 22
3 154 176 22
4 188 210 22
5 236 258 22
6 271 293 22
7 308 330 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10422
MSDDDHRRVNDAIDAGRVPEDITADFLLQSRDRPAIVGIIVVTSLTFFVVICRMLSRTLILKRFGLDDSLALASL
VRRPSELPQEMIEVFKKSLNRCELTSALSLRLCVASQVLLIAFVALCIELIRLGSGRHFAYIENVLDIPTVQKTQ
VLDYAAHIIYTTALLLCRVSGLAFYHRVCGVHQGFQTAIKVTLGVLIAGYLPQLLLIVFHCRPVTGLWPYGWEPG
VEGYVCLQWGVVYVTNSTISLICDILLFGIPGAMLRVLEMPQRRKIQLGCILLPGSAVIAISIARLVLVVRGQWE
SDMSWSYNTLLAVEVSEIGATLIALSVPGIKPAFDKFIMRKSGTTRLGGSNYKRNTGSQASKATALSALKLKSEY
GVIGREPTMGRHGTGTEVSAVAHSGKISQEGIQVTVDFEVYNESGVALDKM*
Coding >Hirsu2|10422
ATGAGCGACGACGACCACCGCCGAGTCAACGACGCCATCGACGCCGGCCGAGTCCCCGAAGATATCACCGCCGAC
TTCCTTCTCCAGAGCCGAGACCGGCCGGCCATCGTGGGCATCATCGTTGTGACGAGTCTGACTTTTTTCGTCGTC
ATCTGTCGGATGCTCAGCCGCACCCTGATCCTCAAACGGTTCGGCCTGGACGACAGCTTAGCACTCGCATCGCTG
GTACGTCGACCCTCCGAGCTCCCACAAGAGATGATTGAGGTCTTCAAGAAGTCGTTGAACCGATGTGAACTGACA
AGCGCGCTCTCTCTGCGGCTTTGTGTGGCCTCGCAGGTGCTCCTTATCGCTTTCGTGGCCCTGTGCATCGAACTC
ATCCGGCTCGGGTCTGGGCGACATTTTGCCTATATCGAGAACGTTCTCGACATCCCTACGGTACAGAAAACACAG
GTCCTCGACTATGCCGCCCACATCATCTACACCACGGCCCTGCTACTGTGCCGCGTGTCCGGCCTGGCCTTTTAC
CACCGCGTGTGTGGCGTGCACCAGGGTTTCCAGACGGCCATCAAGGTCACTCTGGGCGTCCTCATCGCCGGCTAC
CTACCGCAGTTGCTCCTCATCGTCTTCCACTGTCGGCCCGTGACCGGTCTGTGGCCCTACGGCTGGGAGCCCGGC
GTCGAGGGCTACGTCTGCTTGCAATGGGGCGTCGTCTACGTTACAAACTCGACCATCTCGCTCATCTGCGACATT
TTACTCTTCGGCATCCCCGGCGCCATGTTGCGGGTCCTCGAGATGCCCCAGCGGCGCAAAATCCAGCTCGGCTGC
ATCTTGTTACCGGGTTCAGCAGTCATCGCCATCTCCATCGCTCGGCTGGTATTAGTTGTCCGAGGGCAGTGGGAA
AGCGACATGTCGTGGAGCTACAACACCCTACTGGCCGTCGAGGTCTCGGAGATCGGCGCGACGCTCATCGCCCTG
TCGGTGCCCGGCATCAAGCCTGCCTTCGACAAATTCATCATGCGCAAGAGCGGCACCACTCGCTTGGGTGGATCA
AACTACAAGCGGAACACAGGCAGTCAAGCTTCCAAGGCAACGGCGCTGAGTGCGCTGAAGCTGAAGTCGGAGTAT
GGCGTCATCGGCCGCGAGCCGACGATGGGGCGCCACGGCACCGGCACCGAGGTGAGCGCCGTTGCCCACAGCGGG
AAAATAAGCCAGGAGGGGATCCAGGTCACTGTGGATTTCGAAGTCTACAACGAGTCGGGTGTTGCCCTGGACAAG
ATGTGA
Transcript >Hirsu2|10422
ATGAGCGACGACGACCACCGCCGAGTCAACGACGCCATCGACGCCGGCCGAGTCCCCGAAGATATCACCGCCGAC
TTCCTTCTCCAGAGCCGAGACCGGCCGGCCATCGTGGGCATCATCGTTGTGACGAGTCTGACTTTTTTCGTCGTC
ATCTGTCGGATGCTCAGCCGCACCCTGATCCTCAAACGGTTCGGCCTGGACGACAGCTTAGCACTCGCATCGCTG
GTACGTCGACCCTCCGAGCTCCCACAAGAGATGATTGAGGTCTTCAAGAAGTCGTTGAACCGATGTGAACTGACA
AGCGCGCTCTCTCTGCGGCTTTGTGTGGCCTCGCAGGTGCTCCTTATCGCTTTCGTGGCCCTGTGCATCGAACTC
ATCCGGCTCGGGTCTGGGCGACATTTTGCCTATATCGAGAACGTTCTCGACATCCCTACGGTACAGAAAACACAG
GTCCTCGACTATGCCGCCCACATCATCTACACCACGGCCCTGCTACTGTGCCGCGTGTCCGGCCTGGCCTTTTAC
CACCGCGTGTGTGGCGTGCACCAGGGTTTCCAGACGGCCATCAAGGTCACTCTGGGCGTCCTCATCGCCGGCTAC
CTACCGCAGTTGCTCCTCATCGTCTTCCACTGTCGGCCCGTGACCGGTCTGTGGCCCTACGGCTGGGAGCCCGGC
GTCGAGGGCTACGTCTGCTTGCAATGGGGCGTCGTCTACGTTACAAACTCGACCATCTCGCTCATCTGCGACATT
TTACTCTTCGGCATCCCCGGCGCCATGTTGCGGGTCCTCGAGATGCCCCAGCGGCGCAAAATCCAGCTCGGCTGC
ATCTTGTTACCGGGTTCAGCAGTCATCGCCATCTCCATCGCTCGGCTGGTATTAGTTGTCCGAGGGCAGTGGGAA
AGCGACATGTCGTGGAGCTACAACACCCTACTGGCCGTCGAGGTCTCGGAGATCGGCGCGACGCTCATCGCCCTG
TCGGTGCCCGGCATCAAGCCTGCCTTCGACAAATTCATCATGCGCAAGAGCGGCACCACTCGCTTGGGTGGATCA
AACTACAAGCGGAACACAGGCAGTCAAGCTTCCAAGGCAACGGCGCTGAGTGCGCTGAAGCTGAAGTCGGAGTAT
GGCGTCATCGGCCGCGAGCCGACGATGGGGCGCCACGGCACCGGCACCGAGGTGAGCGCCGTTGCCCACAGCGGG
AAAATAAGCCAGGAGGGGATCCAGGTCACTGTGGATTTCGAAGTCTACAACGAGTCGGGTGTTGCCCTGGACAAG
ATGTGA
Gene >Hirsu2|10422
ATGAGCGACGACGACCACCGCCGAGTCAACGACGCCATCGACGCCGGCCGAGTCCCCGAAGATATCACCGCCGAC
TTCCTTCTCCAGAGCCGAGACCGGCCGGCCATCGTGGGCATCATCGTTGTGACGAGTCTGACTTTTTTCGTCGTC
ATCTGTCGGATGCTCAGCCGCACCCTGATCCTCAAACGGTTCGGCCTGGACGACAGCTTAGCACTCGCATCGCTG
GTACGTCGACCCTCCGAGCTCCCACAAGAGATGATTGAGGTCTTCAAGAAGTCGTTGAACCGATGTGAACTGACA
AGCGCGCTCTCTCTGCGGCTTTGTGTGGCCTCGCAGGTGCTCCTTATCGCTTTCGTGGCCCTGTGCATCGAACTC
ATCCGGCTCGGGTCTGGGCGACATTTTGCCTATATCGAGAACGTTCTCGACATCCCTACGGTACAGAAAACACAG
GTCCTCGACTATGCCGCCCACATCATCTACACCACGGCCCTGCTACTGTGCCGCGTGTCCGGCCTGGCCTTTTAC
CACCGCGTGTGTGGCGTGCACCAGGGTTTCCAGACGGCCATCAAGGTCACTCTGGGCGTCCTCATCGCCGGCTAC
CTACCGCAGTTGCTCCTCATCGTCTTCCACTGTCGGCCCGTGACCGGTCTGTGGCCCTACGGCTGGGAGCCCGGC
GTCGAGGGCTACGTCTGCTTGCAATGGGGCGTCGTCTACGTTACAAACTCGACCATCTCGCTCATCTGCGACATT
TTACTCTTCGGCATCCCCGGCGCCATGTTGCGGGTCCTCGAGATGCCCCAGCGGCGCAAAATCCAGCTCGGCTGC
ATCTTGTTACCGGGTTCAGCGTAAGCTTCACCACCCCCGGGAGACGATTATGTGTCTCTTCCCGATCTCTCAGCG
GAGAAACACTTCACTTGAAGAAAGAAGAAAGGAAGAAGAACTGAAATAGAAAAGGGATTCAGATCTAACCCGTTG
ATCCTGCAGAGTCATCGCCATCTCCATCGCTCGGCTGGTATTAGTTGTCCGAGGGCAGTGTAAGTGGCCCCGCTC
CCGACCTTCCCTCACCGACCCGAGCAGCGACTCTCCAGTCGCCAAACGACGCTTTGATCCAGCTGACGAAGGGGC
GAAACCTAACACACAGGGGAAAGCGACATGTCGTGGAGCTACAACACCCTACTGGCCGTCGAGGTCTCGGAGATC
GGCGCGACGCTCATCGCCCTGTCGGTGCCCGGCATCAAGCCTGCCTTCGACAAATTCATCATGCGCAAGAGCGGC
ACCACTCGCTTGGGTGGATCAAACTACAAGCGGAACACAGGCAGTCAAGCTTCCAAGGCAACGGCGCTGAGTGCG
CTGAAGCTGAAGTCGGAGTATGGCGTCATCGGCCGCGAGCCGACGATGGGGCGCCACGGCACCGGCACCGAGGTG
AGCGCCGTTGCCCACAGCGGGAAAATAAGCCAGGAGGGGATCCAGGTCACTGTGGATTTCGAAGTCTACAACGAG
TCGGGTGTTGCCCTGGACAAGATGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail