Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10417
Gene name
LocationContig_84:1643..1904
Strand+
Gene length (bp)261
Transcript length (bp)261
Coding sequence length (bp)261
Protein length (aa) 87

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0975 0.0751 0.946 0.0504 0.0764 0.0166 0.1215 0.1342 0.081 0.005

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.999642

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4805
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|01082
Ophiocordyceps camponoti-rufipedis Ophun1|3190
Ophiocordyceps kimflemingae Ophio5|1361
Ophiocordyceps subramaniannii Hirsu2|10417 (this protein)
Ophiocordyceps subramaniannii Hirsu2|3324

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10417
MKSLSTILFLALLSGSTTFAAEAAVASEAAEAAKTKGGKACGQSFFAQFHDFAHCVLMIVPEGFTHAEDPQHFRK
CCPWSRRRKEE*
Coding >Hirsu2|10417
ATGAAGTCCTTAAGCACGATTCTATTTCTCGCCCTCCTCTCCGGCAGCACGACGTTTGCCGCCGAAGCCGCCGTG
GCCAGCGAAGCTGCTGAAGCTGCCAAGACCAAAGGGGGGAAGGCATGTGGGCAGTCCTTTTTCGCCCAATTTCAC
GACTTCGCCCATTGCGTCCTGATGATCGTCCCGGAAGGGTTCACACACGCCGAGGATCCGCAGCATTTCAGGAAA
TGCTGTCCTTGGAGCAGAAGACGGAAGGAGGAGTAG
Transcript >Hirsu2|10417
ATGAAGTCCTTAAGCACGATTCTATTTCTCGCCCTCCTCTCCGGCAGCACGACGTTTGCCGCCGAAGCCGCCGTG
GCCAGCGAAGCTGCTGAAGCTGCCAAGACCAAAGGGGGGAAGGCATGTGGGCAGTCCTTTTTCGCCCAATTTCAC
GACTTCGCCCATTGCGTCCTGATGATCGTCCCGGAAGGGTTCACACACGCCGAGGATCCGCAGCATTTCAGGAAA
TGCTGTCCTTGGAGCAGAAGACGGAAGGAGGAGTAG
Gene >Hirsu2|10417
ATGAAGTCCTTAAGCACGATTCTATTTCTCGCCCTCCTCTCCGGCAGCACGACGTTTGCCGCCGAAGCCGCCGTG
GCCAGCGAAGCTGCTGAAGCTGCCAAGACCAAAGGGGGGAAGGCATGTGGGCAGTCCTTTTTCGCCCAATTTCAC
GACTTCGCCCATTGCGTCCTGATGATCGTCCCGGAAGGGTTCACACACGCCGAGGATCCGCAGCATTTCAGGAAA
TGCTGTCCTTGGAGCAGAAGACGGAAGGAGGAGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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