© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10407 |
| Gene name | |
| Location | Contig_837:305..1502 |
| Strand | + |
| Gene length (bp) | 1197 |
| Transcript length (bp) | 876 |
| Coding sequence length (bp) | 876 |
| Protein length (aa) | 292 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.4568 | 0.4135 | 0.6249 | 0.0929 | 0.2952 | 0.0941 | 0.2412 | 0.2958 | 0.1995 | 0.0864 |
| Orthofinder run ID | 4 |
| Orthogroup | 8475 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|10407 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10407 MGMYPPPATLLGLVAVPVSVLAITLGTDSVDDGDTVRRLPSPLTAGTVSTDGSKLNRATGTCLPASVGSYVQQGI ASIHVRPSTSSASATPRPLMTYVLDRRPEHQQPEPRLAGASSSSSVRGTAGRLPMARDPTPASSASERGTAPART VSLHARWPTRPTGGATGRDIVQGPSTGRPPHAEHHHRLDDESLNTAPTCRRVVDASAHAAPWLPRSSFRSAFLYA DAAYPVPRESSQRLYAAPLLPTCFTHPVSMCNVIQPPLVRDKRSAPGLVRPGPRAHRQLDQVASWR* |
| Coding | >Hirsu2|10407 ATGGGCATGTATCCGCCGCCTGCTACTCTGCTCGGCCTGGTAGCGGTACCGGTCAGCGTGTTGGCCATCACCTTG GGTACAGACTCAGTAGACGATGGCGACACTGTCCGTCGGCTTCCCTCGCCCCTTACGGCCGGCACTGTATCTACT GACGGCTCCAAGCTGAACCGAGCGACCGGCACCTGCCTGCCTGCCTCTGTAGGTAGCTATGTACAGCAAGGCATT GCATCAATCCATGTGCGTCCGTCCACATCATCCGCATCAGCCACGCCCCGGCCTCTCATGACGTACGTCCTGGAC CGTCGGCCTGAGCATCAGCAGCCGGAGCCTCGCCTGGCCGGCGCATCATCGTCCTCGTCCGTCCGTGGCACCGCA GGCAGACTGCCAATGGCCAGAGACCCGACTCCGGCCAGCTCCGCTTCCGAAAGAGGGACTGCCCCGGCACGCACT GTAAGCCTCCATGCCCGCTGGCCTACACGGCCTACAGGGGGGGCTACAGGTCGCGATATCGTCCAGGGTCCCTCT ACCGGCCGGCCACCTCACGCCGAGCATCATCACCGACTCGACGACGAGAGTCTGAATACGGCACCTACATGTCGA CGAGTCGTCGACGCGTCCGCTCACGCAGCGCCATGGCTACCGCGATCCAGCTTTCGCTCCGCTTTCCTTTACGCC GACGCGGCATATCCTGTACCGAGAGAGAGCAGCCAGCGTCTCTACGCCGCGCCGCTGCTACCTACATGCTTTACA CACCCTGTTTCCATGTGTAACGTCATCCAACCGCCTCTTGTTCGAGACAAAAGGTCCGCCCCCGGACTCGTGCGG CCGGGGCCTCGGGCGCATCGTCAGCTCGACCAGGTCGCCTCCTGGAGATAA |
| Transcript | >Hirsu2|10407 ATGGGCATGTATCCGCCGCCTGCTACTCTGCTCGGCCTGGTAGCGGTACCGGTCAGCGTGTTGGCCATCACCTTG GGTACAGACTCAGTAGACGATGGCGACACTGTCCGTCGGCTTCCCTCGCCCCTTACGGCCGGCACTGTATCTACT GACGGCTCCAAGCTGAACCGAGCGACCGGCACCTGCCTGCCTGCCTCTGTAGGTAGCTATGTACAGCAAGGCATT GCATCAATCCATGTGCGTCCGTCCACATCATCCGCATCAGCCACGCCCCGGCCTCTCATGACGTACGTCCTGGAC CGTCGGCCTGAGCATCAGCAGCCGGAGCCTCGCCTGGCCGGCGCATCATCGTCCTCGTCCGTCCGTGGCACCGCA GGCAGACTGCCAATGGCCAGAGACCCGACTCCGGCCAGCTCCGCTTCCGAAAGAGGGACTGCCCCGGCACGCACT GTAAGCCTCCATGCCCGCTGGCCTACACGGCCTACAGGGGGGGCTACAGGTCGCGATATCGTCCAGGGTCCCTCT ACCGGCCGGCCACCTCACGCCGAGCATCATCACCGACTCGACGACGAGAGTCTGAATACGGCACCTACATGTCGA CGAGTCGTCGACGCGTCCGCTCACGCAGCGCCATGGCTACCGCGATCCAGCTTTCGCTCCGCTTTCCTTTACGCC GACGCGGCATATCCTGTACCGAGAGAGAGCAGCCAGCGTCTCTACGCCGCGCCGCTGCTACCTACATGCTTTACA CACCCTGTTTCCATGTGTAACGTCATCCAACCGCCTCTTGTTCGAGACAAAAGGTCCGCCCCCGGACTCGTGCGG CCGGGGCCTCGGGCGCATCGTCAGCTCGACCAGGTCGCCTCCTGGAGATAA |
| Gene | >Hirsu2|10407 ATGGGCATGTATGTATGTGCAGTACCTCAGGTTGTATGTATACATACCTACATACCTCTACCTTAGTAGGTACCT GGTAGATAGAGGTACACAGCCATGGATCAAGTACCAAGGTAGTACTAGACCTACACGGCTCCCGTTCGACTGCCA CCTGCATCGCACCACCTCGGGATCCACGATTTGAGTTGCCAGCAGCAAGTTGCGTCCGGGTCGCACGTCCGGGTC GCACCGTCCGGGTCGCACGTCTGGGTCGCACGTCTGGGTCGTACGGGACGCGCATCTGCTCGCAGGCCCTTCCAT GCCGGGCTCCCTCCCTGAGACGCTGTGTTGCAGCCGCCGCCTGCTACTCTGCTCGGCCTGGTAGCGGTACCGGTC AGCGTGTTGGCCATCACCTTGGGTACAGACTCAGTAGACGATGGCGACACTGTCCGTCGGCTTCCCTCGCCCCTT ACGGCCGGCACTGTATCTACTGACGGCTCCAAGCTGAACCGAGCGACCGGCACCTGCCTGCCTGCCTCTGTAGGT AGCTATGTACAGCAAGGCATTGCATCAATCCATGTGCGTCCGTCCACATCATCCGCATCAGCCACGCCCCGGCCT CTCATGACGTACGTCCTGGACCGTCGGCCTGAGCATCAGCAGCCGGAGCCTCGCCTGGCCGGCGCATCATCGTCC TCGTCCGTCCGTGGCACCGCAGGCAGACTGCCAATGGCCAGAGACCCGACTCCGGCCAGCTCCGCTTCCGAAAGA GGGACTGCCCCGGCACGCACTGTAAGCCTCCATGCCCGCTGGCCTACACGGCCTACAGGGGGGGCTACAGGTCGC GATATCGTCCAGGGTCCCTCTACCGGCCGGCCACCTCACGCCGAGCATCATCACCGACTCGACGACGAGAGTCTG AATACGGCACCTACATGTCGACGAGTCGTCGACGCGTCCGCTCACGCAGCGCCATGGCTACCGCGATCCAGCTTT CGCTCCGCTTTCCTTTACGCCGACGCGGCATATCCTGTACCGAGAGAGAGCAGCCAGCGTCTCTACGCCGCGCCG CTGCTACCTACATGCTTTACACACCCTGTTTCCATGTGTAACGTCATCCAACCGCCTCTTGTTCGAGACAAAAGG TCCGCCCCCGGACTCGTGCGGCCGGGGCCTCGGGCGCATCGTCAGCTCGACCAGGTCGCCTCCTGGAGATAA |