Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10403
Gene name
LocationContig_835:10441..11185
Strand+
Gene length (bp)744
Transcript length (bp)672
Coding sequence length (bp)672
Protein length (aa) 224

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04622 ERG2_Sigma1R ERG2 and Sigma1 receptor like protein 2.5E-96 18 222

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q92254|ERG2_NEUCR C-8 sterol isomerase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=erg-1 PE=3 SV=2 9 223 7.0E-120
sp|P33281|ERG2_MAGO7 C-8 sterol isomerase OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=ERG2 PE=3 SV=1 12 223 1.0E-113
sp|P32360|ERG2_USTMA C-8 sterol isomerase OS=Ustilago maydis (strain 521 / FGSC 9021) GN=ERG2 PE=3 SV=1 14 223 2.0E-70
sp|P32352|ERG2_YEAST C-8 sterol isomerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG2 PE=1 SV=1 38 222 2.0E-60
sp|P87113|ERG2_SCHPO C-8 sterol isomerase erg2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg2 PE=3 SV=1 11 223 1.0E-54
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Swissprot ID Swissprot Description Start End E-value
sp|Q92254|ERG2_NEUCR C-8 sterol isomerase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=erg-1 PE=3 SV=2 9 223 7.0E-120
sp|P33281|ERG2_MAGO7 C-8 sterol isomerase OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=ERG2 PE=3 SV=1 12 223 1.0E-113
sp|P32360|ERG2_USTMA C-8 sterol isomerase OS=Ustilago maydis (strain 521 / FGSC 9021) GN=ERG2 PE=3 SV=1 14 223 2.0E-70
sp|P32352|ERG2_YEAST C-8 sterol isomerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG2 PE=1 SV=1 38 222 2.0E-60
sp|P87113|ERG2_SCHPO C-8 sterol isomerase erg2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg2 PE=3 SV=1 11 223 1.0E-54
sp|Q7ZWG9|SGMR1_DANRE Sigma non-opioid intracellular receptor 1 OS=Danio rerio GN=sigmar1 PE=2 SV=1 11 215 3.0E-31
sp|Q645J3|SGMR1_TARGR Sigma non-opioid intracellular receptor 1 OS=Taricha granulosa GN=SIGMAR1 PE=2 SV=1 13 215 3.0E-31
sp|Q66IM1|SGMR1_XENTR Sigma non-opioid intracellular receptor 1 OS=Xenopus tropicalis GN=sigmar1 PE=2 SV=1 12 215 2.0E-30
sp|Q6DCU6|SGMR1_XENLA Sigma non-opioid intracellular receptor 1 OS=Xenopus laevis GN=sigmar1 PE=2 SV=1 12 215 2.0E-30
sp|Q5ZL84|SGMR1_CHICK Sigma non-opioid intracellular receptor 1 OS=Gallus gallus GN=SIGMAR1 PE=2 SV=1 67 208 1.0E-29
sp|O55242|SGMR1_MOUSE Sigma non-opioid intracellular receptor 1 OS=Mus musculus GN=Sigmar1 PE=1 SV=1 12 212 7.0E-27
sp|Q60492|SGMR1_CAVPO Sigma non-opioid intracellular receptor 1 OS=Cavia porcellus GN=SIGMAR1 PE=1 SV=1 12 218 5.0E-26
sp|Q58DH7|SGMR1_BOVIN Sigma non-opioid intracellular receptor 1 OS=Bos taurus GN=SIGMAR1 PE=2 SV=1 67 212 6.0E-25
sp|Q9R0C9|SGMR1_RAT Sigma non-opioid intracellular receptor 1 OS=Rattus norvegicus GN=Sigmar1 PE=1 SV=1 16 212 7.0E-25
sp|Q5PXE2|SGMR1_TRIVU Sigma non-opioid intracellular receptor 1 OS=Trichosurus vulpecula GN=SIGMAR1 PE=2 SV=1 16 212 7.0E-25
sp|Q5PXE3|SGMR1_MUSER Sigma non-opioid intracellular receptor 1 OS=Mustela erminea GN=SIGMAR1 PE=2 SV=1 67 212 1.0E-24
sp|Q99720|SGMR1_HUMAN Sigma non-opioid intracellular receptor 1 OS=Homo sapiens GN=SIGMAR1 PE=1 SV=1 67 212 2.0E-24
sp|Q55BU8|ERG2_DICDI Protein erg2 homolog OS=Dictyostelium discoideum GN=erg2 PE=3 SV=1 41 219 9.0E-24
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 12 30 18
2 94 116 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10403
MAPAQAPGMGRLLAVLAVLTALLSSVVWLLEQNLQRFYVFELDHLHGLSQRAIAAHGNSTRDVVRYIVDELADRA
PAHVNLDEDWVFNNAGGAMGAMYIIHASITEYLIIFGTAIGTEGHTGRHTADDYFHILAGTQLAYVPGEYAPEVY
PQGSVHHLRRGDVKQYRMPEGCFALEYARGWIPPMLFFGFADGLSSTLDFPTLWKTTRITGREMIANLLRGKF*
Coding >Hirsu2|10403
ATGGCTCCTGCGCAAGCGCCCGGGATGGGCCGGCTGCTGGCGGTGCTGGCGGTGCTGACGGCGCTGCTGTCGTCG
GTCGTCTGGCTGCTGGAGCAGAACCTGCAGCGCTTCTACGTCTTCGAGCTCGACCACCTGCACGGCCTGTCGCAG
CGGGCCATCGCGGCGCACGGCAACAGCACGCGCGACGTGGTGCGCTACATCGTGGACGAGCTGGCCGACCGGGCG
CCGGCCCACGTCAACCTCGACGAGGACTGGGTCTTCAACAACGCCGGCGGCGCCATGGGCGCCATGTACATCATC
CACGCCAGCATCACCGAGTACCTCATCATCTTCGGCACGGCCATCGGCACCGAGGGCCACACCGGCCGGCACACG
GCCGACGACTACTTCCACATCCTAGCCGGCACGCAGCTGGCCTACGTGCCGGGCGAGTACGCGCCCGAGGTGTAC
CCGCAGGGCAGCGTGCACCACCTGCGCCGCGGCGACGTCAAGCAGTACCGCATGCCGGAAGGCTGCTTCGCGCTC
GAGTACGCCCGCGGCTGGATCCCGCCCATGCTCTTCTTCGGCTTCGCCGACGGCCTGTCCAGCACGCTCGACTTC
CCCACCCTGTGGAAGACGACGCGCATCACCGGCCGCGAGATGATTGCCAACCTCCTCCGGGGCAAGTTTTAG
Transcript >Hirsu2|10403
ATGGCTCCTGCGCAAGCGCCCGGGATGGGCCGGCTGCTGGCGGTGCTGGCGGTGCTGACGGCGCTGCTGTCGTCG
GTCGTCTGGCTGCTGGAGCAGAACCTGCAGCGCTTCTACGTCTTCGAGCTCGACCACCTGCACGGCCTGTCGCAG
CGGGCCATCGCGGCGCACGGCAACAGCACGCGCGACGTGGTGCGCTACATCGTGGACGAGCTGGCCGACCGGGCG
CCGGCCCACGTCAACCTCGACGAGGACTGGGTCTTCAACAACGCCGGCGGCGCCATGGGCGCCATGTACATCATC
CACGCCAGCATCACCGAGTACCTCATCATCTTCGGCACGGCCATCGGCACCGAGGGCCACACCGGCCGGCACACG
GCCGACGACTACTTCCACATCCTAGCCGGCACGCAGCTGGCCTACGTGCCGGGCGAGTACGCGCCCGAGGTGTAC
CCGCAGGGCAGCGTGCACCACCTGCGCCGCGGCGACGTCAAGCAGTACCGCATGCCGGAAGGCTGCTTCGCGCTC
GAGTACGCCCGCGGCTGGATCCCGCCCATGCTCTTCTTCGGCTTCGCCGACGGCCTGTCCAGCACGCTCGACTTC
CCCACCCTGTGGAAGACGACGCGCATCACCGGCCGCGAGATGATTGCCAACCTCCTCCGGGGCAAGTTTTAG
Gene >Hirsu2|10403
ATGGCTCCTGCGCAAGCGCCCGGGATGGGCCGGCTGCTGGCGGTGCTGGCGGTGCTGACGGCGCTGCTGTCGTCG
GTCGTCTGGCTGCTGGAGCAGAACCTGCAGCGCTTCTACGTCTTCGAGCTCGACCACCTGCACGGCCTGTCGCAG
CGGGCCATCGCGGCGCACGGCAACAGCACGCGCGACGTGGTGCGCTACATCGTGGACGAGCTGGCCGACCGGGCG
CCGGCCCACGTCAACCTCGACGAGGACTGGGTCTTCAACAACGCCGGCGGCGCCATGGGCGCCATGTACATCATC
CACGCCAGTGAGCCCTCCTCCCCGGTGTGTGTGATGGGTGACGGTTTTCCTTGCTGACGACGGGCGCGCCAAAAA
AAAGGCATCACCGAGTACCTCATCATCTTCGGCACGGCCATCGGCACCGAGGGCCACACCGGCCGGCACACGGCC
GACGACTACTTCCACATCCTAGCCGGCACGCAGCTGGCCTACGTGCCGGGCGAGTACGCGCCCGAGGTGTACCCG
CAGGGCAGCGTGCACCACCTGCGCCGCGGCGACGTCAAGCAGTACCGCATGCCGGAAGGCTGCTTCGCGCTCGAG
TACGCCCGCGGCTGGATCCCGCCCATGCTCTTCTTCGGCTTCGCCGACGGCCTGTCCAGCACGCTCGACTTCCCC
ACCCTGTGGAAGACGACGCGCATCACCGGCCGCGAGATGATTGCCAACCTCCTCCGGGGCAAGTTTTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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