Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|104
Gene name
LocationContig_1014:5148..6525
Strand-
Gene length (bp)1377
Transcript length (bp)1098
Coding sequence length (bp)1098
Protein length (aa) 366

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07986 TBCC Tubulin binding cofactor C 2.7E-29 201 316
PF16752 TBCC_N Tubulin-specific chaperone C N-terminal domain 3.6E-08 5 89

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q3SZE9|TBCC_BOVIN Tubulin-specific chaperone C OS=Bos taurus GN=TBCC PE=2 SV=1 32 334 2.0E-20
sp|Q9SMR2|TBCC_ARATH Tubulin-folding cofactor C OS=Arabidopsis thaliana GN=TFCC PE=1 SV=1 177 334 4.0E-18
sp|Q15814|TBCC_HUMAN Tubulin-specific chaperone C OS=Homo sapiens GN=TBCC PE=1 SV=2 204 334 4.0E-17
sp|Q5R5J7|TBCC_PONAB Tubulin-specific chaperone C OS=Pongo abelii GN=TBCC PE=2 SV=1 204 334 7.0E-17
sp|Q8VCN9|TBCC_MOUSE Tubulin-specific chaperone C OS=Mus musculus GN=Tbcc PE=1 SV=1 204 334 4.0E-16
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Swissprot ID Swissprot Description Start End E-value
sp|Q3SZE9|TBCC_BOVIN Tubulin-specific chaperone C OS=Bos taurus GN=TBCC PE=2 SV=1 32 334 2.0E-20
sp|Q9SMR2|TBCC_ARATH Tubulin-folding cofactor C OS=Arabidopsis thaliana GN=TFCC PE=1 SV=1 177 334 4.0E-18
sp|Q15814|TBCC_HUMAN Tubulin-specific chaperone C OS=Homo sapiens GN=TBCC PE=1 SV=2 204 334 4.0E-17
sp|Q5R5J7|TBCC_PONAB Tubulin-specific chaperone C OS=Pongo abelii GN=TBCC PE=2 SV=1 204 334 7.0E-17
sp|Q8VCN9|TBCC_MOUSE Tubulin-specific chaperone C OS=Mus musculus GN=Tbcc PE=1 SV=1 204 334 4.0E-16
sp|Q8AVX5|XRP2_XENLA Protein XRP2 OS=Xenopus laevis GN=rp2 PE=2 SV=3 225 330 3.0E-08
sp|Q5ZHN4|XRP2_CHICK Protein XRP2 OS=Gallus gallus GN=RP2 PE=2 SV=3 228 340 5.0E-08
sp|Q9EPK2|XRP2_MOUSE Protein XRP2 OS=Mus musculus GN=Rp2 PE=1 SV=3 225 340 3.0E-07
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GO

GO Term Description Terminal node
GO:0015631 tubulin binding Yes
GO:0008092 cytoskeletal protein binding No
GO:0005515 protein binding No
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Peroxisomal targeting signal 0.7623 0.4144 0.038 0.0553 0.0618 0.0496 0.1769 0.0678 0.0353 0.3747

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5986
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2743
Ophiocordyceps australis map64 (Brazil) OphauB2|6596
Ophiocordyceps camponoti-floridani Ophcf2|05201
Ophiocordyceps kimflemingae Ophio5|4713
Ophiocordyceps subramaniannii Hirsu2|104 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|104
MDPPQRFYRHFQDSVAVLQDQIAQLESVSAVAGERQEAVDHVLAAIAKLQNDVADAADRTPSYDRRQYAETIKGL
HDKLHETVARVTPKSRFQFRRSLADDAHVDMGAPENDPRLHPGSLSRKPYGSPRSAPPREPAAESDDVLADLPAT
SRAKDYNKELSQPAASAIRKPSFSTANSIGISDQAGLHIILPSSAARATASGSLTNLRDCIVDMSVPTAHGRPFA
GLALRSINDSLIVAGRVAGPVHITNVSDSILVVIARQVRIHQCKNVDVYLHCTSHPIIEDCTAMRFAPLPECYAS
EAESATENQWDQVDDFKWLKAGHSPNWTTLSEAQMLDDDIWTKTVPGLPGASVEETLRKVGLPRR*
Coding >Hirsu2|104
ATGGATCCCCCGCAGCGCTTCTACCGGCACTTCCAGGACAGCGTTGCCGTGCTCCAGGACCAGATCGCCCAGCTC
GAGTCCGTCTCGGCCGTCGCCGGCGAGCGCCAGGAGGCCGTCGACCACGTGCTGGCCGCCATCGCCAAGCTCCAG
AATGACGTCGCCGATGCCGCCGACCGCACGCCCTCCTACGATAGGAGGCAGTACGCCGAGACCATCAAGGGCCTC
CACGACAAGCTGCACGAGACGGTCGCCCGCGTCACGCCCAAGTCTCGCTTCCAGTTCCGCCGCTCCCTCGCCGAC
GACGCCCACGTCGACATGGGCGCCCCCGAAAACGACCCGCGCCTGCACCCCGGCAGCCTGTCGAGGAAGCCGTAC
GGCAGCCCCCGTTCCGCGCCGCCCCGCGAGCCCGCCGCCGAGAGCGACGACGTCCTGGCCGACCTGCCCGCCACC
TCGCGCGCCAAGGACTACAACAAGGAGCTCTCCCAGCCGGCCGCCTCGGCCATCCGCAAGCCCAGCTTCTCCACC
GCCAATAGCATCGGCATCTCGGACCAGGCCGGCCTGCACATCATCCTGCCCTCGTCGGCCGCCCGCGCCACCGCC
TCGGGGAGCCTGACGAACCTGCGCGACTGCATCGTCGACATGTCCGTCCCCACCGCCCACGGGAGGCCCTTCGCC
GGCCTCGCGCTCCGCAGCATCAACGACAGCCTCATCGTCGCCGGCCGCGTCGCCGGGCCCGTCCACATCACCAAC
GTATCCGACAGCATCCTCGTCGTCATCGCCCGCCAGGTCCGCATCCACCAATGCAAAAACGTCGACGTCTACCTG
CACTGCACCAGCCACCCCATCATCGAAGACTGCACCGCCATGCGCTTCGCCCCGCTTCCCGAGTGCTATGCAAGC
GAGGCCGAATCCGCGACGGAGAACCAATGGGACCAGGTCGACGACTTCAAATGGCTCAAGGCTGGCCACAGCCCC
AACTGGACCACGCTGTCCGAGGCCCAGATGCTCGACGACGACATCTGGACCAAGACCGTCCCGGGCCTGCCAGGC
GCCAGCGTGGAGGAGACTCTGAGAAAGGTCGGGCTGCCGCGACGGTGA
Transcript >Hirsu2|104
ATGGATCCCCCGCAGCGCTTCTACCGGCACTTCCAGGACAGCGTTGCCGTGCTCCAGGACCAGATCGCCCAGCTC
GAGTCCGTCTCGGCCGTCGCCGGCGAGCGCCAGGAGGCCGTCGACCACGTGCTGGCCGCCATCGCCAAGCTCCAG
AATGACGTCGCCGATGCCGCCGACCGCACGCCCTCCTACGATAGGAGGCAGTACGCCGAGACCATCAAGGGCCTC
CACGACAAGCTGCACGAGACGGTCGCCCGCGTCACGCCCAAGTCTCGCTTCCAGTTCCGCCGCTCCCTCGCCGAC
GACGCCCACGTCGACATGGGCGCCCCCGAAAACGACCCGCGCCTGCACCCCGGCAGCCTGTCGAGGAAGCCGTAC
GGCAGCCCCCGTTCCGCGCCGCCCCGCGAGCCCGCCGCCGAGAGCGACGACGTCCTGGCCGACCTGCCCGCCACC
TCGCGCGCCAAGGACTACAACAAGGAGCTCTCCCAGCCGGCCGCCTCGGCCATCCGCAAGCCCAGCTTCTCCACC
GCCAATAGCATCGGCATCTCGGACCAGGCCGGCCTGCACATCATCCTGCCCTCGTCGGCCGCCCGCGCCACCGCC
TCGGGGAGCCTGACGAACCTGCGCGACTGCATCGTCGACATGTCCGTCCCCACCGCCCACGGGAGGCCCTTCGCC
GGCCTCGCGCTCCGCAGCATCAACGACAGCCTCATCGTCGCCGGCCGCGTCGCCGGGCCCGTCCACATCACCAAC
GTATCCGACAGCATCCTCGTCGTCATCGCCCGCCAGGTCCGCATCCACCAATGCAAAAACGTCGACGTCTACCTG
CACTGCACCAGCCACCCCATCATCGAAGACTGCACCGCCATGCGCTTCGCCCCGCTTCCCGAGTGCTATGCAAGC
GAGGCCGAATCCGCGACGGAGAACCAATGGGACCAGGTCGACGACTTCAAATGGCTCAAGGCTGGCCACAGCCCC
AACTGGACCACGCTGTCCGAGGCCCAGATGCTCGACGACGACATCTGGACCAAGACCGTCCCGGGCCTGCCAGGC
GCCAGCGTGGAGGAGACTCTGAGAAAGGTCGGGCTGCCGCGACGGTGA
Gene >Hirsu2|104
ATGGATCCCCCGCAGCGCTTCTACCGGCACTTCCAGGACAGCGTTGCCGGTGTGCTCCTCCTCGTCTCCCCTGCC
CGTCGGTGCGGCGGCTAACGCGACGGCCGCCTCGCCCTTTGGTGCTCGCGCAGTGCTCCAGGACCAGATCGCCCA
GCTCGAGTCCGTCTCGGCCGTCGCCGGCGAGCGCCAGGAGGCCGTCGACCACGTGCTGGCCGCCATCGCCAAGCT
CCAGAATGACGTCGCCGATGCCGCCGACCGCACGCCCTCCTACGATAGGAGGCAGTACGCCGAGGTCTGTCTGCG
CGACAAACAACGCCCGAGCCTCGTCTCCCCCCCATCGGACGGGGCCCCGGCGCGGTGACGAGCCTCTCCCGAGTC
CATGTATTGATGATGCCTCTCCCTCGCGCAGACCATCAAGGGCCTCCACGACAAGCTGCACGAGACGGTCGCCCG
CGTCACGCCCAAGTCTCGCTTCCAGTTCCGCCGCTCCCTCGCCGACGACGCCCACGTCGACATGGGCGCCCCCGA
AAACGACCCGCGCCTGCACCCCGGCAGCCTGTCGAGGAAGCCGTACGGCAGCCCCCGTTCCGCGCCGCCCCGCGA
GCCCGCCGCCGAGAGCGACGACGTCCTGGCCGACCTGCCCGCCACCTCGCGCGCCAAGGACTACAACAAGGAGCT
CTCCCAGCCGGCCGCCTCGGCCATCCGCAAGCCCAGCTTCTCCACCGCCAATAGCATCGGCATCTCGGACCAGGC
CGGCCTGCACATCATCCTGCCCTCGTCGGCCGCCCGCGCCACCGCCTCGGGGAGCCTGACGAACCTGCGCGACTG
CATCGTCGACATGTCCGTCCCCACCGCCCACGGGAGGCCCTTCGCCGGCCTCGCGCTCCGCAGCATCAACGACAG
CCTCATCGTCGCCGGCCGCGTCGCCGGGCCCGTCCACATCACCAACGTATCCGACAGCATCCTCGTCGTCATCGC
CCGCCAGGTCCGCATCCACCAATGCAAAAACGTCGACGTCTACCTGCACTGCACCAGCCACCCCATCATCGAAGA
CTGCACCGCCATGCGCTTCGCCCCGCTTCCCGAGTGCTATGTGAGTGCCCCATGCCCGACCCGTCCCGCGCGATG
CCGGCTGCTTCGGCTCCGACCGACTCGCCGACTGAACCACGACAACAGGCAAGCGAGGCCGAATCCGCGACGGAG
AACCAATGGGACCAGGTCGACGACTTCAAATGGCTCAAGGCTGGCCACAGCCCCAACTGGACCACGCTGTCCGAG
GCCCAGATGCTCGACGACGACATCTGGACCAAGACCGTCCCGGGCCTGCCAGGCGCCAGCGTGGAGGAGACTCTG
AGAAAGGTCGGGCTGCCGCGACGGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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