Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10391
Gene name
LocationContig_833:4977..6454
Strand-
Gene length (bp)1477
Transcript length (bp)1410
Coding sequence length (bp)1410
Protein length (aa) 470

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11951 Fungal_trans_2 Fungal specific transcription factor domain 2.2E-08 103 205
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 1.2E-07 13 46

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q59QC7|UPC2_CANAL Sterol uptake control protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UPC2 PE=1 SV=1 94 373 2.0E-10
sp|Q59QC7|UPC2_CANAL Sterol uptake control protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UPC2 PE=1 SV=1 4 93 2.0E-08
sp|Q05958|ECM22_YEAST Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 48 373 1.0E-06
sp|Q59MD2|UME6_CANAL Transcriptional regulatory protein UME6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UME6 PE=2 SV=1 4 48 1.0E-06

GO

GO Term Description Terminal node
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008270 zinc ion binding Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0005634 nucleus Yes
GO:0043169 cation binding No
GO:0065007 biological regulation No
GO:0010468 regulation of gene expression No
GO:0019222 regulation of metabolic process No
GO:0050794 regulation of cellular process No
GO:0005488 binding No
GO:0046872 metal ion binding No
GO:0043229 intracellular organelle No
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0043226 organelle No
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0060255 regulation of macromolecule metabolic process No
GO:0043231 intracellular membrane-bounded organelle No
GO:0043227 membrane-bounded organelle No
GO:2001141 regulation of RNA biosynthetic process No
GO:0043167 ion binding No
GO:0044424 intracellular part No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0050789 regulation of biological process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0044464 cell part No
GO:0031323 regulation of cellular metabolic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0080090 regulation of primary metabolic process No
GO:2000112 regulation of cellular macromolecule biosynthetic process No
GO:0140110 transcription regulator activity No
GO:0003700 DNA-binding transcription factor activity No
GO:0046914 transition metal ion binding No
GO:0031326 regulation of cellular biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10391
MPPRRSHKKSRAGCRRCKTRKIKCDEVHPRCGNCVKHGVLCDFESRQPSDDLLSAPTPAAARAASSQPSPGPAPA
TPVAAASASASASAAEAPRHADRFMELRLLHHFTTSTAQTLFIGSPSTDDLWQRAVPQMAFDGRSYLLDAILSVA
ALHLRSKQPDDKALARASHAYAASALAEYCASLDRGIAADNAEALFLTASLIAFQSTASRIFIKDDAEAEADVAA
RYTLPMPWFHAFQGVKTIVATSWQWIRSSDIVKAVIDSQPSFQLDLNPLGPGSFFGHLLEGLDDELATELPHHVS
PTSHGYSHAVSVLNWAHKNARAPAALAFPATVSRRFVDLVEEKRPRALAILACFFALLKRMDGHVWWLDDVARRE
VTGLVSLFEPGSAWWRHLEWPVRISVWDGSAIPPDVWGVECEPQPQGADKGLMDSMMSHIELLSKLTTSHAPKSP
PPPAMPGGGEFGLTVAPLD*
Coding >Hirsu2|10391
ATGCCGCCCCGGCGCTCGCACAAGAAGTCGCGCGCCGGATGCCGCAGGTGCAAGACGAGGAAGATCAAGTGCGAC
GAGGTCCATCCGCGATGCGGCAACTGCGTCAAGCACGGCGTCTTGTGCGACTTCGAGTCCCGCCAGCCTTCCGAC
GATCTCCTCTCCGCCCCCACGCCCGCGGCCGCCCGTGCTGCCTCTTCCCAGCCCTCGCCCGGCCCGGCCCCGGCC
ACGCCCGTCGCCGCCGCCTCCGCCTCCGCCTCCGCCTCCGCCGCCGAAGCACCGCGGCACGCCGACCGGTTCATG
GAGCTCCGCCTGCTGCACCACTTCACCACCAGCACCGCCCAGACGCTCTTCATCGGCTCCCCCTCGACCGATGAC
CTGTGGCAGCGCGCCGTCCCGCAGATGGCCTTTGACGGCAGGTCCTATCTCCTCGACGCCATCCTCTCCGTCGCC
GCCCTGCACCTCCGCTCCAAGCAGCCGGACGACAAGGCCCTGGCCCGCGCCTCGCACGCCTACGCCGCCTCGGCC
CTGGCCGAGTACTGCGCCTCGCTCGACCGCGGCATCGCCGCCGACAACGCCGAGGCCCTCTTCCTGACCGCCTCG
CTCATCGCCTTCCAGTCGACCGCCTCGCGCATCTTCATCAAGGACGACGCCGAGGCCGAGGCCGACGTCGCCGCC
CGCTACACCCTGCCCATGCCGTGGTTCCACGCCTTCCAGGGCGTCAAGACCATCGTCGCCACCTCGTGGCAGTGG
ATCCGGAGCAGCGACATCGTCAAGGCCGTCATCGACTCCCAGCCCAGCTTCCAGCTGGACCTGAACCCCCTCGGC
CCCGGCTCCTTCTTCGGCCACCTGCTCGAGGGCCTCGACGACGAGCTGGCCACCGAGCTGCCGCACCACGTCTCG
CCCACCAGCCACGGCTACTCGCACGCCGTCAGCGTCCTCAACTGGGCCCACAAGAACGCCCGCGCCCCCGCCGCC
CTCGCCTTCCCGGCCACCGTCTCGCGCCGCTTCGTCGACCTGGTCGAGGAGAAGCGCCCGCGCGCCCTCGCCATC
CTCGCCTGCTTCTTCGCCCTGCTCAAGCGCATGGACGGCCACGTCTGGTGGCTCGACGACGTCGCCCGCCGCGAG
GTGACGGGGCTCGTCAGCCTGTTCGAGCCCGGCTCGGCCTGGTGGCGCCACCTGGAGTGGCCCGTCCGCATCTCC
GTCTGGGACGGCAGCGCCATCCCCCCGGACGTCTGGGGCGTCGAGTGCGAGCCCCAGCCCCAGGGCGCCGACAAG
GGCCTGATGGACTCCATGATGAGCCACATCGAGCTGCTGAGCAAGCTGACCACCAGCCACGCCCCCAAGAGCCCG
CCGCCGCCCGCCATGCCCGGCGGCGGAGAGTTTGGACTGACGGTCGCGCCTCTCGACTGA
Transcript >Hirsu2|10391
ATGCCGCCCCGGCGCTCGCACAAGAAGTCGCGCGCCGGATGCCGCAGGTGCAAGACGAGGAAGATCAAGTGCGAC
GAGGTCCATCCGCGATGCGGCAACTGCGTCAAGCACGGCGTCTTGTGCGACTTCGAGTCCCGCCAGCCTTCCGAC
GATCTCCTCTCCGCCCCCACGCCCGCGGCCGCCCGTGCTGCCTCTTCCCAGCCCTCGCCCGGCCCGGCCCCGGCC
ACGCCCGTCGCCGCCGCCTCCGCCTCCGCCTCCGCCTCCGCCGCCGAAGCACCGCGGCACGCCGACCGGTTCATG
GAGCTCCGCCTGCTGCACCACTTCACCACCAGCACCGCCCAGACGCTCTTCATCGGCTCCCCCTCGACCGATGAC
CTGTGGCAGCGCGCCGTCCCGCAGATGGCCTTTGACGGCAGGTCCTATCTCCTCGACGCCATCCTCTCCGTCGCC
GCCCTGCACCTCCGCTCCAAGCAGCCGGACGACAAGGCCCTGGCCCGCGCCTCGCACGCCTACGCCGCCTCGGCC
CTGGCCGAGTACTGCGCCTCGCTCGACCGCGGCATCGCCGCCGACAACGCCGAGGCCCTCTTCCTGACCGCCTCG
CTCATCGCCTTCCAGTCGACCGCCTCGCGCATCTTCATCAAGGACGACGCCGAGGCCGAGGCCGACGTCGCCGCC
CGCTACACCCTGCCCATGCCGTGGTTCCACGCCTTCCAGGGCGTCAAGACCATCGTCGCCACCTCGTGGCAGTGG
ATCCGGAGCAGCGACATCGTCAAGGCCGTCATCGACTCCCAGCCCAGCTTCCAGCTGGACCTGAACCCCCTCGGC
CCCGGCTCCTTCTTCGGCCACCTGCTCGAGGGCCTCGACGACGAGCTGGCCACCGAGCTGCCGCACCACGTCTCG
CCCACCAGCCACGGCTACTCGCACGCCGTCAGCGTCCTCAACTGGGCCCACAAGAACGCCCGCGCCCCCGCCGCC
CTCGCCTTCCCGGCCACCGTCTCGCGCCGCTTCGTCGACCTGGTCGAGGAGAAGCGCCCGCGCGCCCTCGCCATC
CTCGCCTGCTTCTTCGCCCTGCTCAAGCGCATGGACGGCCACGTCTGGTGGCTCGACGACGTCGCCCGCCGCGAG
GTGACGGGGCTCGTCAGCCTGTTCGAGCCCGGCTCGGCCTGGTGGCGCCACCTGGAGTGGCCCGTCCGCATCTCC
GTCTGGGACGGCAGCGCCATCCCCCCGGACGTCTGGGGCGTCGAGTGCGAGCCCCAGCCCCAGGGCGCCGACAAG
GGCCTGATGGACTCCATGATGAGCCACATCGAGCTGCTGAGCAAGCTGACCACCAGCCACGCCCCCAAGAGCCCG
CCGCCGCCCGCCATGCCCGGCGGCGGAGAGTTTGGACTGACGGTCGCGCCTCTCGACTGA
Gene >Hirsu2|10391
ATGCCGCCCCGGCGCTCGCACAAGAAGTCGCGCGCCGGATGCCGCAGGTGCAAGACGAGGAAGATCAAGGTGAAG
GCGCCCGCCCGTGTGACTTGTCTGTCGTCCGCCGCTGACCGGCCGTTCGCCTTGCCCCCAGTGCGACGAGGTCCA
TCCGCGATGCGGCAACTGCGTCAAGCACGGCGTCTTGTGCGACTTCGAGTCCCGCCAGCCTTCCGACGATCTCCT
CTCCGCCCCCACGCCCGCGGCCGCCCGTGCTGCCTCTTCCCAGCCCTCGCCCGGCCCGGCCCCGGCCACGCCCGT
CGCCGCCGCCTCCGCCTCCGCCTCCGCCTCCGCCGCCGAAGCACCGCGGCACGCCGACCGGTTCATGGAGCTCCG
CCTGCTGCACCACTTCACCACCAGCACCGCCCAGACGCTCTTCATCGGCTCCCCCTCGACCGATGACCTGTGGCA
GCGCGCCGTCCCGCAGATGGCCTTTGACGGCAGGTCCTATCTCCTCGACGCCATCCTCTCCGTCGCCGCCCTGCA
CCTCCGCTCCAAGCAGCCGGACGACAAGGCCCTGGCCCGCGCCTCGCACGCCTACGCCGCCTCGGCCCTGGCCGA
GTACTGCGCCTCGCTCGACCGCGGCATCGCCGCCGACAACGCCGAGGCCCTCTTCCTGACCGCCTCGCTCATCGC
CTTCCAGTCGACCGCCTCGCGCATCTTCATCAAGGACGACGCCGAGGCCGAGGCCGACGTCGCCGCCCGCTACAC
CCTGCCCATGCCGTGGTTCCACGCCTTCCAGGGCGTCAAGACCATCGTCGCCACCTCGTGGCAGTGGATCCGGAG
CAGCGACATCGTCAAGGCCGTCATCGACTCCCAGCCCAGCTTCCAGCTGGACCTGAACCCCCTCGGCCCCGGCTC
CTTCTTCGGCCACCTGCTCGAGGGCCTCGACGACGAGCTGGCCACCGAGCTGCCGCACCACGTCTCGCCCACCAG
CCACGGCTACTCGCACGCCGTCAGCGTCCTCAACTGGGCCCACAAGAACGCCCGCGCCCCCGCCGCCCTCGCCTT
CCCGGCCACCGTCTCGCGCCGCTTCGTCGACCTGGTCGAGGAGAAGCGCCCGCGCGCCCTCGCCATCCTCGCCTG
CTTCTTCGCCCTGCTCAAGCGCATGGACGGCCACGTCTGGTGGCTCGACGACGTCGCCCGCCGCGAGGTGACGGG
GCTCGTCAGCCTGTTCGAGCCCGGCTCGGCCTGGTGGCGCCACCTGGAGTGGCCCGTCCGCATCTCCGTCTGGGA
CGGCAGCGCCATCCCCCCGGACGTCTGGGGCGTCGAGTGCGAGCCCCAGCCCCAGGGCGCCGACAAGGGCCTGAT
GGACTCCATGATGAGCCACATCGAGCTGCTGAGCAAGCTGACCACCAGCCACGCCCCCAAGAGCCCGCCGCCGCC
CGCCATGCCCGGCGGCGGAGAGTTTGGACTGACGGTCGCGCCTCTCGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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