Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10388
Gene name
LocationContig_832:11347..11767
Strand-
Gene length (bp)420
Transcript length (bp)279
Coding sequence length (bp)279
Protein length (aa) 93

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9Y7T9|YCJD_SCHPO Uncharacterized J domain-containing protein C63.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC63.13 PE=3 SV=1 7 81 2.0E-19

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10388
MMREQGMAEDGTNRPTNKFWSLLGGVSGGALGFIVANVPGMVAGAVAGNRLGAVRDARGKSVYSVFQELPQDDRA
RLLSQLAVRVFSHAVGV*
Coding >Hirsu2|10388
ATGATGCGCGAGCAGGGCATGGCCGAGGACGGCACCAACCGCCCGACCAACAAGTTCTGGAGCCTGCTCGGCGGC
GTCAGCGGCGGCGCCCTCGGCTTCATCGTCGCCAACGTCCCCGGCATGGTCGCCGGCGCCGTGGCCGGGAACCGC
CTCGGCGCCGTCCGCGACGCCCGCGGCAAGAGCGTCTACTCCGTCTTCCAGGAACTCCCCCAGGACGACAGGGCT
AGGCTGCTCAGCCAGCTGGCCGTCAGGGTCTTCAGCCATGCCGTCGGCGTCTGA
Transcript >Hirsu2|10388
ATGATGCGCGAGCAGGGCATGGCCGAGGACGGCACCAACCGCCCGACCAACAAGTTCTGGAGCCTGCTCGGCGGC
GTCAGCGGCGGCGCCCTCGGCTTCATCGTCGCCAACGTCCCCGGCATGGTCGCCGGCGCCGTGGCCGGGAACCGC
CTCGGCGCCGTCCGCGACGCCCGCGGCAAGAGCGTCTACTCCGTCTTCCAGGAACTCCCCCAGGACGACAGGGCT
AGGCTGCTCAGCCAGCTGGCCGTCAGGGTCTTCAGCCATGCCGTCGGCGTCTGA
Gene >Hirsu2|10388
ATGATGCGCGAGCAGGGCATGGCCGAGGACGGCACCAACCGCCCGACCAACAAGTTCTGGAGCCTGCTCGGCGGC
GTCAGCGGCGGCGCCCTCGGCTTCATCGTCGCCAACGTCCCCGGCATGGTCGCCGGCGCCGTGGCCGGGAACCGC
CTCGGCGCCGTCCGCGACGCCCGCGGCAAGAGCGTCTACTCCGTCTTCCAGGTGAGCGACCGCCGGCCGGGAGCC
GCCCACCGGCGCCCTCCCGCGTTGCCAGTCTTCCGCAGACTCCCCCCCCCCCCCCNNNNNNNNNNNCCGCGTCCC
CTACCGCTTCGGGCCGCCGCTTGGCTGACGCTGCGCGTGCAGGAACTCCCCCAGGACGACAGGGCTAGGCTGCTC
AGCCAGCTGGCCGTCAGGGTCTTCAGCCATGCCGTCGGCGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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