© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1038 |
| Gene name | |
| Location | Contig_1214:295..1402 |
| Strand | - |
| Gene length (bp) | 1107 |
| Transcript length (bp) | 1107 |
| Coding sequence length (bp) | 1107 |
| Protein length (aa) | 369 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09729 | Gti1_Pac2 | Gti1/Pac2 family | 4.9E-51 | 1 | 154 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|J9N5P9|WOR1_FUSO4 | Global transcription regulator sge1 OS=Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) GN=sge1 PE=2 SV=1 | 1 | 215 | 8.0E-85 |
| sp|S0E3H0|WOR1_GIBF5 | Global transcription regulator sge1 OS=Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) GN=sge1 PE=2 SV=1 | 1 | 208 | 1.0E-84 |
| sp|G2X740|WOR1_VERDV | Global transcription regulator sge1 OS=Verticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137) GN=sge1 PE=3 SV=1 | 1 | 195 | 3.0E-79 |
| sp|W7MPI5|WOR1_GIBM7 | Global transcription regulator sge1 OS=Gibberella moniliformis (strain M3125 / FGSC 7600) GN=sge1 PE=3 SV=1 | 1 | 193 | 6.0E-71 |
| sp|I1S5P3|WOR1_GIBZE | Global transcription regulator FGP1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=FGP1 PE=3 SV=1 | 2 | 193 | 2.0E-62 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|J9N5P9|WOR1_FUSO4 | Global transcription regulator sge1 OS=Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) GN=sge1 PE=2 SV=1 | 1 | 215 | 8.0E-85 |
| sp|S0E3H0|WOR1_GIBF5 | Global transcription regulator sge1 OS=Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) GN=sge1 PE=2 SV=1 | 1 | 208 | 1.0E-84 |
| sp|G2X740|WOR1_VERDV | Global transcription regulator sge1 OS=Verticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137) GN=sge1 PE=3 SV=1 | 1 | 195 | 3.0E-79 |
| sp|W7MPI5|WOR1_GIBM7 | Global transcription regulator sge1 OS=Gibberella moniliformis (strain M3125 / FGSC 7600) GN=sge1 PE=3 SV=1 | 1 | 193 | 6.0E-71 |
| sp|I1S5P3|WOR1_GIBZE | Global transcription regulator FGP1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=FGP1 PE=3 SV=1 | 2 | 193 | 2.0E-62 |
| sp|P40002|MIT1_YEAST | Transcriptional regulator MIT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MIT1 PE=1 SV=1 | 1 | 182 | 5.0E-35 |
| sp|O14367|GTI1_SCHPO | Gluconate transport inducer 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gti1 PE=4 SV=1 | 1 | 68 | 1.0E-22 |
| sp|P38867|YHX7_YEAST | Uncharacterized protein YHR177W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHR177W PE=1 SV=2 | 1 | 182 | 2.0E-21 |
| sp|Q10294|PAC2_SCHPO | cAMP-independent regulatory protein pac2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pac2 PE=2 SV=1 | 1 | 176 | 5.0E-20 |
| sp|Q5AP80|WOR1_CANAL | White-opaque regulator 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=WOR1 PE=1 SV=1 | 2 | 66 | 1.0E-17 |
| sp|O14367|GTI1_SCHPO | Gluconate transport inducer 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gti1 PE=4 SV=1 | 113 | 190 | 6.0E-16 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.3642 | 0.8998 | 0.0095 | 0.1144 | 0.1291 | 0.0022 | 0.1865 | 0.1243 | 0.0414 | 0.0031 |
| Orthofinder run ID | 4 |
| Orthogroup | 4800 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1038 MLFEGSLQGLLNHVPRRPHDRERQDLIKSGSVFIYEEHASGIKRWTDGVSWSPSRILGNFLIYRELEKPFPPGEK KRALKKKKCPAGGITKHDGAARPSVGNYASSGIEVGKDTERSLIGSLIDSYPFKTDGLVKKTISITYRGVPHHLV SYYSVEDVMSGRLITPSKDPRLRDIVPRLELMTSQNFRAPVDEVEYGPDGAPALFAAVPNSAHEFGGSSGSILQR AWSSGPGMQTVPMPGYPASATFTFPPAPHHSYVGPMSSPMPVPMVPRMELMASQNFRAPVDEVDYGPDGSSTLFA AVPNSTHEFNGTSGSILQRAWSGPSMQTVSVPDYPASAAFYQPAPPHPHHSRTSWLSHKPTESTGDTG* |
| Coding | >Hirsu2|1038 ATGCTTTTCGAGGGCTCTCTCCAGGGTTTGCTCAACCACGTCCCGCGTCGGCCGCACGACAGAGAGCGCCAGGAC CTCATCAAGAGCGGCAGCGTCTTCATCTACGAGGAGCATGCCTCCGGCATCAAGCGCTGGACCGACGGTGTTTCA TGGAGCCCCAGTCGCATTCTCGGCAACTTTCTCATCTACCGCGAACTCGAAAAGCCCTTCCCCCCTGGCGAGAAG AAGCGCGCTCTCAAGAAGAAAAAGTGCCCGGCCGGTGGCATCACCAAGCACGATGGCGCCGCCCGTCCCAGCGTC GGCAACTATGCCTCGTCGGGCATCGAGGTGGGCAAGGACACGGAGCGTTCCTTGATCGGCTCCTTAATAGACTCG TACCCGTTCAAGACCGACGGCCTCGTCAAGAAGACCATCAGCATCACCTACCGTGGCGTTCCGCACCACCTTGTC AGCTACTACAGCGTCGAGGATGTTATGTCGGGGCGCCTCATCACCCCCTCCAAAGATCCTCGCTTAAGGGACATA GTCCCGCGCTTGGAGCTCATGACATCGCAAAACTTCCGCGCACCCGTCGACGAGGTCGAATACGGTCCAGACGGC GCACCTGCGCTCTTTGCCGCCGTTCCGAATAGCGCCCACGAGTTCGGCGGCAGTTCCGGCAGCATTTTGCAGAGA GCCTGGTCGTCGGGCCCCGGCATGCAGACTGTTCCCATGCCCGGTTATCCTGCCTCGGCCACCTTTACGTTTCCG CCCGCCCCTCACCACTCATACGTTGGACCCATGAGCTCCCCTATGCCAGTTCCCATGGTCCCTCGCATGGAGCTC ATGGCATCGCAAAACTTCCGCGCGCCCGTCGACGAGGTCGATTACGGTCCTGATGGCTCATCCACGCTCTTTGCC GCCGTTCCGAACAGCACCCACGAGTTCAACGGCACTTCCGGCAGCATTCTGCAGAGGGCCTGGTCGGGCCCCAGC ATGCAGACCGTTTCTGTGCCCGACTATCCCGCGTCAGCCGCCTTTTATCAGCCCGCCCCGCCGCACCCGCACCAC TCTCGAACGAGTTGGCTGAGCCATAAGCCTACTGAATCGACGGGCGACACAGGATAG |
| Transcript | >Hirsu2|1038 ATGCTTTTCGAGGGCTCTCTCCAGGGTTTGCTCAACCACGTCCCGCGTCGGCCGCACGACAGAGAGCGCCAGGAC CTCATCAAGAGCGGCAGCGTCTTCATCTACGAGGAGCATGCCTCCGGCATCAAGCGCTGGACCGACGGTGTTTCA TGGAGCCCCAGTCGCATTCTCGGCAACTTTCTCATCTACCGCGAACTCGAAAAGCCCTTCCCCCCTGGCGAGAAG AAGCGCGCTCTCAAGAAGAAAAAGTGCCCGGCCGGTGGCATCACCAAGCACGATGGCGCCGCCCGTCCCAGCGTC GGCAACTATGCCTCGTCGGGCATCGAGGTGGGCAAGGACACGGAGCGTTCCTTGATCGGCTCCTTAATAGACTCG TACCCGTTCAAGACCGACGGCCTCGTCAAGAAGACCATCAGCATCACCTACCGTGGCGTTCCGCACCACCTTGTC AGCTACTACAGCGTCGAGGATGTTATGTCGGGGCGCCTCATCACCCCCTCCAAAGATCCTCGCTTAAGGGACATA GTCCCGCGCTTGGAGCTCATGACATCGCAAAACTTCCGCGCACCCGTCGACGAGGTCGAATACGGTCCAGACGGC GCACCTGCGCTCTTTGCCGCCGTTCCGAATAGCGCCCACGAGTTCGGCGGCAGTTCCGGCAGCATTTTGCAGAGA GCCTGGTCGTCGGGCCCCGGCATGCAGACTGTTCCCATGCCCGGTTATCCTGCCTCGGCCACCTTTACGTTTCCG CCCGCCCCTCACCACTCATACGTTGGACCCATGAGCTCCCCTATGCCAGTTCCCATGGTCCCTCGCATGGAGCTC ATGGCATCGCAAAACTTCCGCGCGCCCGTCGACGAGGTCGATTACGGTCCTGATGGCTCATCCACGCTCTTTGCC GCCGTTCCGAACAGCACCCACGAGTTCAACGGCACTTCCGGCAGCATTCTGCAGAGGGCCTGGTCGGGCCCCAGC ATGCAGACCGTTTCTGTGCCCGACTATCCCGCGTCAGCCGCCTTTTATCAGCCCGCCCCGCCGCACCCGCACCAC TCTCGAACGAGTTGGCTGAGCCATAAGCCTACTGAATCGACGGGCGACACAGGATAG |
| Gene | >Hirsu2|1038 ATGCTTTTCGAGGGCTCTCTCCAGGGTTTGCTCAACCACGTCCCGCGTCGGCCGCACGACAGAGAGCGCCAGGAC CTCATCAAGAGCGGCAGCGTCTTCATCTACGAGGAGCATGCCTCCGGCATCAAGCGCTGGACCGACGGTGTTTCA TGGAGCCCCAGTCGCATTCTCGGCAACTTTCTCATCTACCGCGAACTCGAAAAGCCCTTCCCCCCTGGCGAGAAG AAGCGCGCTCTCAAGAAGAAAAAGTGCCCGGCCGGTGGCATCACCAAGCACGATGGCGCCGCCCGTCCCAGCGTC GGCAACTATGCCTCGTCGGGCATCGAGGTGGGCAAGGACACGGAGCGTTCCTTGATCGGCTCCTTAATAGACTCG TACCCGTTCAAGACCGACGGCCTCGTCAAGAAGACCATCAGCATCACCTACCGTGGCGTTCCGCACCACCTTGTC AGCTACTACAGCGTCGAGGATGTTATGTCGGGGCGCCTCATCACCCCCTCCAAAGATCCTCGCTTAAGGGACATA GTCCCGCGCTTGGAGCTCATGACATCGCAAAACTTCCGCGCACCCGTCGACGAGGTCGAATACGGTCCAGACGGC GCACCTGCGCTCTTTGCCGCCGTTCCGAATAGCGCCCACGAGTTCGGCGGCAGTTCCGGCAGCATTTTGCAGAGA GCCTGGTCGTCGGGCCCCGGCATGCAGACTGTTCCCATGCCCGGTTATCCTGCCTCGGCCACCTTTACGTTTCCG CCCGCCCCTCACCACTCATACGTTGGACCCATGAGCTCCCCTATGCCAGTTCCCATGGTCCCTCGCATGGAGCTC ATGGCATCGCAAAACTTCCGCGCGCCCGTCGACGAGGTCGATTACGGTCCTGATGGCTCATCCACGCTCTTTGCC GCCGTTCCGAACAGCACCCACGAGTTCAACGGCACTTCCGGCAGCATTCTGCAGAGGGCCTGGTCGGGCCCCAGC ATGCAGACCGTTTCTGTGCCCGACTATCCCGCGTCAGCCGCCTTTTATCAGCCCGCCCCGCCGCACCCGCACCAC TCTCGAACGAGTTGGCTGAGCCATAAGCCTACTGAATCGACGGGCGACACAGGATAG |