Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10377
Gene name
LocationContig_830:10271..11493
Strand+
Gene length (bp)1222
Transcript length (bp)750
Coding sequence length (bp)750
Protein length (aa) 250

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05875 Ceramidase Ceramidase 4.4E-76 20 231

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9NUN7|ACER3_HUMAN Alkaline ceramidase 3 OS=Homo sapiens GN=ACER3 PE=1 SV=3 12 230 8.0E-37
sp|Q9D099|ACER3_MOUSE Alkaline ceramidase 3 OS=Mus musculus GN=Acer3 PE=2 SV=1 12 230 9.0E-37
sp|Q02896|YDC1_YEAST Alkaline ceramidase YDC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDC1 PE=1 SV=1 13 231 2.0E-27
sp|P38298|YPC1_YEAST Alkaline ceramidase YPC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPC1 PE=1 SV=1 14 231 1.0E-24
sp|Q6TMJ1|DCD3A_DICDI Putative alkaline ceramidase dcd3A OS=Dictyostelium discoideum GN=dcd3A PE=2 SV=1 19 223 3.0E-13
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9NUN7|ACER3_HUMAN Alkaline ceramidase 3 OS=Homo sapiens GN=ACER3 PE=1 SV=3 12 230 8.0E-37
sp|Q9D099|ACER3_MOUSE Alkaline ceramidase 3 OS=Mus musculus GN=Acer3 PE=2 SV=1 12 230 9.0E-37
sp|Q02896|YDC1_YEAST Alkaline ceramidase YDC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDC1 PE=1 SV=1 13 231 2.0E-27
sp|P38298|YPC1_YEAST Alkaline ceramidase YPC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPC1 PE=1 SV=1 14 231 1.0E-24
sp|Q6TMJ1|DCD3A_DICDI Putative alkaline ceramidase dcd3A OS=Dictyostelium discoideum GN=dcd3A PE=2 SV=1 19 223 3.0E-13
sp|Q55DQ0|DCD3B_DICDI Putative alkaline ceramidase dcd3B OS=Dictyostelium discoideum GN=dcd3B PE=3 SV=1 20 116 4.0E-11
sp|Q5QJU3|ACER2_HUMAN Alkaline ceramidase 2 OS=Homo sapiens GN=ACER2 PE=1 SV=2 18 110 2.0E-07
sp|Q8VD53|ACER2_MOUSE Alkaline ceramidase 2 OS=Mus musculus GN=Acer2 PE=2 SV=1 26 110 3.0E-07
sp|Q9VIP7|ACASE_DROME Alkaline ceramidase OS=Drosophila melanogaster GN=bwa PE=2 SV=2 26 110 7.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0006672 ceramide metabolic process Yes
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides Yes
GO:0009987 cellular process No
GO:1901564 organonitrogen compound metabolic process No
GO:0003824 catalytic activity No
GO:0016787 hydrolase activity No
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds No
GO:0044425 membrane part No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0031224 intrinsic component of membrane No
GO:0044237 cellular metabolic process No
GO:0006643 membrane lipid metabolic process No
GO:0071704 organic substance metabolic process No
GO:0006629 lipid metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0044238 primary metabolic process No
GO:0006665 sphingolipid metabolic process No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0044255 cellular lipid metabolic process No
GO:0043603 cellular amide metabolic process No
GO:0003674 molecular_function No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 73 95 22
2 105 122 17
3 127 149 22
4 154 173 19
5 193 215 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10377
MASTIISRFLTAPYPDHGDGFWGEQTSTLNFCEEDYALSFYCAELCNTLTNALFLWLGVRGIRNCLRQSHPTIFL
FAFLGYIVVGLGSVFFHATLKYPMQLVDELSMIYTTCLMMYASFSHARSSSFCAILGLCLLALAGSITAYYHMTK
NPDFHQGAYAVLTATVVFRSMWVMESQVRPKLEACDRRDSRGLLKTMWALVTTGLAVFVAGYAIWNLDNIFCSPL
RRWRRTEVNHDPDSKPVVLDIVGV*
Coding >Hirsu2|10377
ATGGCATCCACGATCATCTCCCGCTTCTTGACGGCGCCCTATCCAGACCACGGCGACGGGTTCTGGGGCGAGCAG
ACGTCGACGCTCAACTTCTGCGAAGAGGACTATGCCCTGTCCTTCTATTGCGCCGAACTATGTAACACTCTGACA
AATGCCCTCTTCCTCTGGCTGGGCGTCCGAGGAATACGCAATTGCCTCCGCCAGTCTCATCCAACCATCTTCCTG
TTCGCTTTCCTGGGCTACATCGTCGTCGGCCTCGGATCCGTCTTCTTCCATGCCACCCTCAAATACCCGATGCAG
CTGGTGGACGAGCTGTCCATGATTTACACCACCTGCCTCATGATGTACGCCAGTTTCTCCCATGCACGGTCGAGC
AGCTTCTGTGCAATCCTCGGCCTGTGCCTACTCGCATTGGCCGGATCCATCACGGCCTACTACCACATGACGAAG
AATCCAGACTTCCACCAGGGCGCTTATGCCGTGCTCACCGCCACCGTCGTATTTCGCAGCATGTGGGTCATGGAG
TCTCAGGTACGCCCGAAGCTCGAGGCCTGCGATCGGCGCGACTCGCGGGGCTTGCTCAAGACCATGTGGGCGCTC
GTGACGACAGGACTTGCTGTCTTCGTTGCCGGCTACGCCATCTGGAACCTCGATAACATCTTTTGCAGCCCGCTG
CGGCGCTGGAGACGCACAGAGGTAAATCACGACCCGGACTCGAAGCCAGTCGTTCTCGACATCGTGGGCGTCTAA
Transcript >Hirsu2|10377
ATGGCATCCACGATCATCTCCCGCTTCTTGACGGCGCCCTATCCAGACCACGGCGACGGGTTCTGGGGCGAGCAG
ACGTCGACGCTCAACTTCTGCGAAGAGGACTATGCCCTGTCCTTCTATTGCGCCGAACTATGTAACACTCTGACA
AATGCCCTCTTCCTCTGGCTGGGCGTCCGAGGAATACGCAATTGCCTCCGCCAGTCTCATCCAACCATCTTCCTG
TTCGCTTTCCTGGGCTACATCGTCGTCGGCCTCGGATCCGTCTTCTTCCATGCCACCCTCAAATACCCGATGCAG
CTGGTGGACGAGCTGTCCATGATTTACACCACCTGCCTCATGATGTACGCCAGTTTCTCCCATGCACGGTCGAGC
AGCTTCTGTGCAATCCTCGGCCTGTGCCTACTCGCATTGGCCGGATCCATCACGGCCTACTACCACATGACGAAG
AATCCAGACTTCCACCAGGGCGCTTATGCCGTGCTCACCGCCACCGTCGTATTTCGCAGCATGTGGGTCATGGAG
TCTCAGGTACGCCCGAAGCTCGAGGCCTGCGATCGGCGCGACTCGCGGGGCTTGCTCAAGACCATGTGGGCGCTC
GTGACGACAGGACTTGCTGTCTTCGTTGCCGGCTACGCCATCTGGAACCTCGATAACATCTTTTGCAGCCCGCTG
CGGCGCTGGAGACGCACAGAGGTAAATCACGACCCGGACTCGAAGCCAGTCGTTCTCGACATCGTGGGCGTCTAA
Gene >Hirsu2|10377
ATGGCATCCACGATCATCTCCCGCTTCTTGACGGCGCCCTATCCAGACCACGGCGACGGGTTCTGGGGCGAGCAG
ACGTCGACGCTCAACTTCTGCGAAGAGGTCAGCTCCGAGAGCCTGTTGTTTGGCCAACGTGTCGCATCTGACCGA
CGTTTCCAGGACTATGCCCTGTCCTTCTATTGCGCCGAACTATGTAACGTGAGGCGCCCCCGAAACCCTCGTTCC
GCTCGACCGTGGCCGTATCGAGAGCTGACAGCCTGGCAGACTCTGACAAATGCCCTCTTCCTCTGGCTGGGCGTC
CGAGGAATACGCAATTGCCTCCGCCAGTCTCATCCAACCATCTTCCTGTTCGCTTTCCTGGGCTACATCGTCGTC
GGCCTCGGATCCGTCTTCTTCCATGCCACCCTCAAATGTACCTGCTCCCACCGCACCCGGCTTCCTCGTTGTACG
GTCCCCGCGGCTGACGACACCCTCACCCTCGCAGACCCGATGCAGCTGGTGGACGAGCTGTCCATGATTTACACC
ACCTGCCTCATGATGTACGCCAGTTTCTCCCATGCACGGTCGAGCAGCTTCTGTGCAATCCTCGGCCTGTGCCTA
CTCGCATTGGCCGGATCCATCACGGTAGGTCTCCGGCGGGGGTAAAGGGCCACGACTGACGACTGCCTCAGGCCT
ACTACCACATGACGAAGAATCCAGACTTCCACCAGGGCGCTTATGCCGTGCTCACCGCCACCGTCGTATTTCGCA
GCATGTGGGTCATGGAGTCTCAGGTACGCCCGAAGCTCGAGGCCTGCGATCGGCGCGACTCGCGGGGCTTGCTCA
AGACCATGTGGGCGCTCGTGACGACAGGTGCGTTGTCGTCCGGTCTTGGCGTCTCGAGATCGGGCGAAATCTTTA
TCGCGAGTGCTCGGGCTGACCCATGGCCGCGGCCTTTCGGGCGCCACAACAGGACTTGCTGTCTTCGTTGCCGGC
TACGCCATCTGGAACCTCGATAACATCTTTTGCAGCCCGCTGCGGCGCTGGAGACGCACAGTCGGTCTGCCCTGG
GCCGTTCTGTTGGAGGGGCACGCCTGGTGGCATCTGATGACAGGTCTGGGTGAGTATCGGCCACCGGCCAGGGCG
CGGACACTTGTTTCTTTCACTTGACTAACGGTGCGCACAGGAGGTAAATCACGACCCGGACTCGAAGCCAGTCGT
TCTCGACATCGTGGGCGTCTAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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