© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10375 |
| Gene name | |
| Location | Contig_830:5243..7339 |
| Strand | + |
| Gene length (bp) | 2096 |
| Transcript length (bp) | 1911 |
| Coding sequence length (bp) | 1911 |
| Protein length (aa) | 637 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 5.7E-29 | 142 | 541 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 1.5E-11 | 208 | 554 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q00357|TOXA_COCCA | Putative HC-toxin efflux carrier TOXA OS=Cochliobolus carbonum GN=TOXA PE=3 SV=1 | 139 | 609 | 5.0E-76 |
| sp|Q10072|YAN6_SCHPO | Uncharacterized transporter C3H1.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.06c PE=3 SV=1 | 109 | 618 | 2.0E-48 |
| sp|Q9HE13|YI32_SCHPO | Uncharacterized MFS-type transporter C1399.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1399.02 PE=3 SV=1 | 114 | 618 | 4.0E-45 |
| sp|P36172|VBA5_YEAST | Vacuolar basic amino acid transporter 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VBA5 PE=3 SV=1 | 102 | 568 | 2.0E-41 |
| sp|P9WG84|Y1877_MYCTO | Uncharacterized MFS-type transporter MT1926 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1926 PE=3 SV=1 | 142 | 619 | 2.0E-40 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q00357|TOXA_COCCA | Putative HC-toxin efflux carrier TOXA OS=Cochliobolus carbonum GN=TOXA PE=3 SV=1 | 139 | 609 | 5.0E-76 |
| sp|Q10072|YAN6_SCHPO | Uncharacterized transporter C3H1.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.06c PE=3 SV=1 | 109 | 618 | 2.0E-48 |
| sp|Q9HE13|YI32_SCHPO | Uncharacterized MFS-type transporter C1399.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1399.02 PE=3 SV=1 | 114 | 618 | 4.0E-45 |
| sp|P36172|VBA5_YEAST | Vacuolar basic amino acid transporter 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VBA5 PE=3 SV=1 | 102 | 568 | 2.0E-41 |
| sp|P9WG84|Y1877_MYCTO | Uncharacterized MFS-type transporter MT1926 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1926 PE=3 SV=1 | 142 | 619 | 2.0E-40 |
| sp|P9WG85|Y1877_MYCTU | Uncharacterized MFS-type transporter Rv1877 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1877 PE=3 SV=1 | 142 | 619 | 2.0E-40 |
| sp|O42922|YBIH_SCHPO | Uncharacterized MFS-type transporter C16A3.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16A3.17c PE=3 SV=1 | 78 | 554 | 2.0E-39 |
| sp|P96712|BMR3_BACSU | Multidrug resistance protein 3 OS=Bacillus subtilis (strain 168) GN=bmr3 PE=1 SV=1 | 153 | 505 | 8.0E-31 |
| sp|P25594|VBA3_YEAST | Vacuolar basic amino acid transporter 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VBA3 PE=1 SV=1 | 223 | 568 | 6.0E-30 |
| sp|O32182|YUSP_BACSU | Uncharacterized MFS-type transporter YusP OS=Bacillus subtilis (strain 168) GN=yusP PE=3 SV=1 | 138 | 539 | 2.0E-28 |
| sp|P33335|SGE1_YEAST | Protein SGE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SGE1 PE=1 SV=1 | 160 | 523 | 2.0E-28 |
| sp|P50080|AZR1_YEAST | Azole resistance protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AZR1 PE=1 SV=1 | 151 | 520 | 2.0E-27 |
| sp|P9WG89|EMRB_MYCTU | Multidrug resistance protein B homolog OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=emrB PE=3 SV=1 | 150 | 485 | 6.0E-22 |
| sp|P9WG88|EMRB_MYCTO | Multidrug resistance protein B homolog OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=emrB PE=3 SV=1 | 150 | 485 | 9.0E-22 |
| sp|P54585|YHCA_BACSU | Uncharacterized MFS-type transporter YhcA OS=Bacillus subtilis (strain 168) GN=yhcA PE=3 SV=2 | 202 | 469 | 2.0E-19 |
| sp|O59726|FNX2_SCHPO | Vacuolar membrane amino acid uptake transporter fnx2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fnx2 PE=3 SV=1 | 153 | 623 | 3.0E-18 |
| sp|Q04301|VBA1_YEAST | Vacuolar basic amino acid transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VBA1 PE=1 SV=1 | 129 | 463 | 1.0E-17 |
| sp|Q09752|FNX1_SCHPO | Multidrug resistance protein fnx1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fnx1 PE=2 SV=2 | 152 | 477 | 4.0E-17 |
| sp|P9WJY5|EFPA_MYCTU | Uncharacterized MFS-type transporter EfpA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=efpA PE=1 SV=1 | 199 | 563 | 4.0E-14 |
| sp|P9WJY4|EFPA_MYCTO | Uncharacterized MFS-type transporter EfpA OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=efpA PE=3 SV=1 | 199 | 563 | 4.0E-14 |
| sp|P38358|VBA2_YEAST | Vacuolar basic amino acid transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VBA2 PE=1 SV=1 | 173 | 542 | 4.0E-14 |
| sp|P9WG87|Y1250_MYCTU | Uncharacterized MFS-type transporter Rv1250 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1250 PE=3 SV=1 | 146 | 557 | 3.0E-12 |
| sp|P9WG86|Y1250_MYCTO | Uncharacterized MFS-type transporter MT1289 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1289 PE=3 SV=1 | 146 | 557 | 3.0E-12 |
| sp|A4WCC3|MDTD_ENT38 | Putative multidrug resistance protein MdtD OS=Enterobacter sp. (strain 638) GN=mdtD PE=3 SV=1 | 202 | 447 | 5.0E-12 |
| sp|A8AEE4|MDTD_CITK8 | Putative multidrug resistance protein MdtD OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mdtD PE=3 SV=1 | 202 | 447 | 2.0E-11 |
| sp|P9WG90|STP_MYCTO | Multidrug resistance protein Stp OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=stp PE=3 SV=1 | 136 | 622 | 3.0E-11 |
| sp|Q99S97|SDRM_STAAN | Multidrug efflux pump SdrM OS=Staphylococcus aureus (strain N315) GN=sdrM PE=1 SV=1 | 139 | 441 | 4.0E-11 |
| sp|B5XPB7|MDTD_KLEP3 | Putative multidrug resistance protein MdtD OS=Klebsiella pneumoniae (strain 342) GN=mdtD PE=3 SV=1 | 202 | 447 | 1.0E-10 |
| sp|P9WG91|STP_MYCTU | Multidrug resistance protein Stp OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=stp PE=1 SV=1 | 136 | 622 | 2.0E-10 |
| sp|P39886|TCMA_STRGA | Tetracenomycin C resistance and export protein OS=Streptomyces glaucescens GN=tcmA PE=3 SV=1 | 142 | 521 | 2.0E-10 |
| sp|P0AEJ0|EMRB_ECOLI | Multidrug export protein EmrB OS=Escherichia coli (strain K12) GN=emrB PE=1 SV=1 | 202 | 569 | 5.0E-10 |
| sp|P0AEJ1|EMRB_ECO57 | Multidrug export protein EmrB OS=Escherichia coli O157:H7 GN=emrB PE=3 SV=1 | 202 | 569 | 5.0E-10 |
| sp|A6TBH6|MDTD_KLEP7 | Putative multidrug resistance protein MdtD OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=mdtD PE=3 SV=1 | 202 | 447 | 1.0E-09 |
| sp|P44903|HSRA_HAEIN | Probable transport protein HsrA OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hsrA PE=3 SV=1 | 194 | 467 | 1.0E-09 |
| sp|Q6D2A9|MDTD_PECAS | Putative multidrug resistance protein MdtD OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=mdtD PE=3 SV=1 | 198 | 447 | 2.0E-09 |
| sp|P76269|YEBQ_ECOLI | Uncharacterized transporter YebQ OS=Escherichia coli (strain K12) GN=yebQ PE=3 SV=2 | 206 | 480 | 2.0E-09 |
| sp|P11545|MMR_STRCO | Methylenomycin A resistance protein OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=mmr PE=3 SV=1 | 131 | 444 | 6.0E-09 |
| sp|P44927|EMRB_HAEIN | Multidrug export protein EmrB OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=emrB PE=3 SV=1 | 202 | 298 | 8.0E-09 |
| sp|B5BP47|YP53_SCHPO | Uncharacterized transporter C460.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.03 PE=3 SV=1 | 145 | 477 | 1.0E-08 |
| sp|P42670|PUR8_STRAD | Puromycin resistance protein pur8 OS=Streptomyces alboniger GN=pur8 PE=3 SV=1 | 202 | 467 | 2.0E-08 |
| sp|A1JKW8|MDTD_YERE8 | Putative multidrug resistance protein MdtD OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) GN=mdtD PE=3 SV=2 | 198 | 447 | 2.0E-08 |
| sp|A8GHR1|MDTD_SERP5 | Putative multidrug resistance protein MdtD OS=Serratia proteamaculans (strain 568) GN=mdtD PE=3 SV=1 | 202 | 447 | 3.0E-08 |
| sp|C6DBD0|MDTD_PECCP | Putative multidrug resistance protein MdtD OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=mdtD PE=3 SV=1 | 198 | 447 | 4.0E-08 |
| sp|Q8Y9K8|LMRB_LISMO | Lincomycin resistance protein LmrB OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=lmrB PE=3 SV=1 | 170 | 296 | 1.0E-07 |
| sp|Q92EE1|LMRB_LISIN | Lincomycin resistance protein LmrB OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=lmrB PE=3 SV=1 | 170 | 296 | 1.0E-07 |
| sp|P46104|LMRA_STRLN | Lincomycin resistance protein OS=Streptomyces lincolnensis GN=lmrA PE=3 SV=1 | 152 | 471 | 1.0E-07 |
| sp|Q00538|MMR_BACSU | Methylenomycin A resistance protein OS=Bacillus subtilis (strain 168) GN=mmr PE=3 SV=1 | 130 | 451 | 3.0E-07 |
| sp|Q8Z5F5|MDTD_SALTI | Putative multidrug resistance protein MdtD OS=Salmonella typhi GN=mdtD PE=3 SV=1 | 202 | 298 | 3.0E-07 |
| sp|A6TG19|MDTL_KLEP7 | Multidrug resistance protein MdtL OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=mdtL PE=3 SV=1 | 208 | 345 | 3.0E-07 |
| sp|A7MJD1|NANT_CROS8 | Putative sialic acid transporter OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=nanT PE=3 SV=1 | 149 | 325 | 4.0E-07 |
| sp|B4TNI8|MDTD_SALSV | Putative multidrug resistance protein MdtD OS=Salmonella schwarzengrund (strain CVM19633) GN=mdtD PE=3 SV=1 | 202 | 327 | 5.0E-07 |
| sp|A9QZU7|MDTD_YERPG | Putative multidrug resistance protein MdtD OS=Yersinia pestis bv. Antiqua (strain Angola) GN=mdtD PE=3 SV=1 | 198 | 447 | 6.0E-07 |
| sp|B5FMU8|MDTD_SALDC | Putative multidrug resistance protein MdtD OS=Salmonella dublin (strain CT_02021853) GN=mdtD PE=3 SV=1 | 202 | 298 | 6.0E-07 |
| sp|B4T9U3|MDTD_SALHS | Putative multidrug resistance protein MdtD OS=Salmonella heidelberg (strain SL476) GN=mdtD PE=3 SV=1 | 202 | 298 | 6.0E-07 |
| sp|A7FG15|MDTD_YERP3 | Putative multidrug resistance protein MdtD OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=mdtD PE=3 SV=1 | 198 | 447 | 6.0E-07 |
| sp|Q1C5L8|MDTD_YERPA | Putative multidrug resistance protein MdtD OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=mdtD PE=3 SV=1 | 198 | 447 | 6.0E-07 |
| sp|B2K9M2|MDTD_YERPB | Putative multidrug resistance protein MdtD OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=mdtD PE=3 SV=1 | 198 | 447 | 6.0E-07 |
| sp|Q7CJL1|MDTD_YERPE | Putative multidrug resistance protein MdtD OS=Yersinia pestis GN=mdtD PE=3 SV=1 | 198 | 447 | 6.0E-07 |
| sp|Q1CK62|MDTD_YERPN | Putative multidrug resistance protein MdtD OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=mdtD PE=3 SV=1 | 198 | 447 | 6.0E-07 |
| sp|A4TMR4|MDTD_YERPP | Putative multidrug resistance protein MdtD OS=Yersinia pestis (strain Pestoides F) GN=mdtD PE=3 SV=1 | 198 | 447 | 6.0E-07 |
| sp|B1JSD2|MDTD_YERPY | Putative multidrug resistance protein MdtD OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=mdtD PE=3 SV=1 | 198 | 447 | 6.0E-07 |
| sp|O31563|YFIU_BACSU | Uncharacterized MFS-type transporter YfiU OS=Bacillus subtilis (strain 168) GN=yfiU PE=3 SV=1 | 190 | 302 | 6.0E-07 |
| sp|Q668C4|MDTD_YERPS | Putative multidrug resistance protein MdtD OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=mdtD PE=3 SV=1 | 198 | 447 | 6.0E-07 |
| sp|Q8ZNQ0|MDTD_SALTY | Putative multidrug resistance protein MdtD OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=mdtD PE=3 SV=1 | 202 | 298 | 7.0E-07 |
| sp|B5EXV9|MDTD_SALA4 | Putative multidrug resistance protein MdtD OS=Salmonella agona (strain SL483) GN=mdtD PE=3 SV=1 | 202 | 298 | 7.0E-07 |
| sp|B5R0C2|MDTD_SALEP | Putative multidrug resistance protein MdtD OS=Salmonella enteritidis PT4 (strain P125109) GN=mdtD PE=3 SV=1 | 202 | 298 | 7.0E-07 |
| sp|Q5PDW9|MDTD_SALPA | Putative multidrug resistance protein MdtD OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=mdtD PE=3 SV=1 | 202 | 298 | 7.0E-07 |
| sp|B5BF67|MDTD_SALPK | Putative multidrug resistance protein MdtD OS=Salmonella paratyphi A (strain AKU_12601) GN=mdtD PE=3 SV=1 | 202 | 298 | 7.0E-07 |
| sp|A9N7L0|MDTD_SALPB | Putative multidrug resistance protein MdtD OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=mdtD PE=3 SV=1 | 202 | 298 | 7.0E-07 |
| sp|B4SXW2|MDTD_SALNS | Putative multidrug resistance protein MdtD OS=Salmonella newport (strain SL254) GN=mdtD PE=3 SV=1 | 202 | 298 | 7.0E-07 |
| sp|A7FG99|NANT_YERP3 | Putative sialic acid transporter OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=nanT PE=3 SV=1 | 149 | 325 | 1.0E-06 |
| sp|B2K942|NANT_YERPB | Putative sialic acid transporter OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=nanT PE=3 SV=1 | 149 | 325 | 1.0E-06 |
| sp|A9QZJ2|NANT_YERPG | Putative sialic acid transporter OS=Yersinia pestis bv. Antiqua (strain Angola) GN=nanT PE=3 SV=1 | 149 | 325 | 1.0E-06 |
| sp|Q668K2|NANT_YERPS | Putative sialic acid transporter OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=nanT PE=3 SV=1 | 149 | 325 | 1.0E-06 |
| sp|A4TMJ0|NANT_YERPP | Putative sialic acid transporter OS=Yersinia pestis (strain Pestoides F) GN=nanT PE=3 SV=1 | 149 | 325 | 1.0E-06 |
| sp|P9WJW8|Y2459_MYCTO | Uncharacterized MFS-type transporter MT2534 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2534 PE=3 SV=1 | 199 | 623 | 1.0E-06 |
| sp|P9WJW9|Y2459_MYCTU | Uncharacterized MFS-type transporter Rv2459 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2459 PE=3 SV=1 | 199 | 623 | 1.0E-06 |
| sp|B5XZP2|MDTL_KLEP3 | Multidrug resistance protein MdtL OS=Klebsiella pneumoniae (strain 342) GN=mdtL PE=3 SV=1 | 208 | 345 | 1.0E-06 |
| sp|B7LV41|MDTD_ESCF3 | Putative multidrug resistance protein MdtD OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=mdtD PE=3 SV=1 | 202 | 447 | 1.0E-06 |
| sp|Q8ZCH3|NANT_YERPE | Putative sialic acid transporter OS=Yersinia pestis GN=nanT PE=3 SV=1 | 149 | 325 | 2.0E-06 |
| sp|Q1C5V2|NANT_YERPA | Putative sialic acid transporter OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=nanT PE=3 SV=1 | 149 | 325 | 2.0E-06 |
| sp|P9WJX3|Y1634_MYCTU | Probable multidrug-efflux transporter Rv1634 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1634 PE=1 SV=1 | 199 | 291 | 2.0E-06 |
| sp|P9WJX2|Y1634_MYCTO | Probable multidrug-efflux transporter MT1670 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1670 PE=3 SV=1 | 199 | 291 | 2.0E-06 |
| sp|Q9P6J7|YHD3_SCHPO | Uncharacterized MFS-type transporter C1683.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.03c PE=3 SV=1 | 170 | 468 | 4.0E-06 |
| sp|O34502|YVKA_BACSU | Uncharacterized MFS-type transporter YvkA OS=Bacillus subtilis (strain 168) GN=yvkA PE=3 SV=1 | 153 | 357 | 5.0E-06 |
| sp|P31474|HSRA_ECOLI | Probable transport protein HsrA OS=Escherichia coli (strain K12) GN=hsrA PE=1 SV=1 | 202 | 298 | 6.0E-06 |
| sp|B1JFW5|NANT_YERPY | Putative sialic acid transporter OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=nanT PE=3 SV=1 | 149 | 325 | 6.0E-06 |
| sp|O35018|LMRB_BACSU | Lincomycin resistance protein LmrB OS=Bacillus subtilis (strain 168) GN=lmrB PE=3 SV=1 | 155 | 318 | 7.0E-06 |
| sp|P94422|YCNB_BACSU | Uncharacterized MFS-type transporter YcnB OS=Bacillus subtilis (strain 168) GN=ycnB PE=3 SV=1 | 173 | 481 | 8.0E-06 |
| sp|P39637|YWFA_BACSU | Uncharacterized MFS-type transporter YwfA OS=Bacillus subtilis (strain 168) GN=ywfA PE=3 SV=1 | 199 | 293 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 140 | 162 | 22 |
| 2 | 172 | 189 | 17 |
| 3 | 196 | 218 | 22 |
| 4 | 228 | 250 | 22 |
| 5 | 257 | 279 | 22 |
| 6 | 289 | 311 | 22 |
| 7 | 332 | 350 | 18 |
| 8 | 360 | 382 | 22 |
| 9 | 403 | 425 | 22 |
| 10 | 440 | 457 | 17 |
| 11 | 464 | 483 | 19 |
| 12 | 493 | 515 | 22 |
| 13 | 524 | 546 | 22 |
| 14 | 597 | 619 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10375 MDSKGTPETQSAKGAEAMPRPANRLRPGMRTSTIGAEELSVFSPLEVTQITALDFVFPSRRVSWRQSVLSDGGLS AQFPARTPKGQLRPDSYLGHQSRLEPLHDPDSDGQSGLSRHSGGEADLEFLDLEDEQEYPTGAKLFIMIAALVFS IFLIALDMATITDEFKGLQDVAWYGAVFFMTAGGFQSTWGKTYKFFPLKIAFLTAIFIFEVGSLICGVAPSSTVF IIGRAIAGIGAAGVGSGSYTMVAFIAKPKSRAAYTGLLGAVYGVASVLGPLLGGVFSGATTWRWCFYINLPIGAL PVGTIVFLFHPPKAAKPQEATLKEKLLQMDPLGTSFMMGAIITYLIAVNYGGQTYPWSSSMVIGLLVGSGLLAIA FGLCEFWQDERAIVIPRLIGKREIGLSAFFSIMQSGAFYCMIYYLPIYFQAIRGSDPIMSGVQNLPFILAAMLGA LSAGIFISRTGMSTIVMVGGAGLGVLGSGLCYTLDRNTSTGAWVGYQIVAGLGLGGAMQIPVIVCQVSVELVDLS SATAMILCFQTLGGAIWLSAAQSAFVNRMLLAVPNTAPGVDPMRVVATGAGQLHKAFREDELAGVLAAYLDGIKI AFVLSCAIVGAAFVLGLFLPWRRHDTAAIQNSAGAA* |
| Coding | >Hirsu2|10375 ATGGACTCCAAAGGGACGCCAGAGACCCAGAGCGCCAAGGGGGCCGAGGCCATGCCACGGCCGGCCAACAGACTG CGGCCCGGCATGAGGACGTCGACGATTGGGGCCGAGGAACTGTCCGTCTTCAGCCCTCTCGAGGTGACGCAGATC ACCGCCTTGGACTTCGTCTTTCCCTCGCGGAGGGTAAGCTGGCGCCAGTCCGTCCTCAGCGACGGGGGACTGAGC GCTCAGTTCCCGGCTCGGACGCCCAAGGGCCAGCTGCGTCCCGACTCCTATCTGGGCCACCAGAGCCGACTCGAG CCCCTTCACGACCCAGACTCGGACGGCCAGTCCGGCTTGTCCCGACACTCAGGAGGGGAGGCCGACCTCGAGTTT CTGGACTTGGAGGATGAGCAAGAGTATCCCACCGGGGCCAAACTGTTCATCATGATCGCCGCCCTGGTCTTTAGC ATCTTCCTCATCGCTCTTGACATGGCAACCATCACGGACGAGTTCAAGGGCCTTCAGGACGTGGCGTGGTACGGA GCCGTCTTTTTCATGACCGCCGGCGGCTTTCAATCCACCTGGGGCAAGACGTACAAGTTTTTCCCCCTCAAGATC GCCTTCTTGACCGCAATCTTCATCTTCGAGGTCGGCAGTCTGATATGCGGAGTGGCGCCGTCGTCGACCGTCTTC ATCATTGGTCGGGCCATTGCAGGCATCGGGGCCGCAGGCGTCGGCTCGGGCTCCTACACCATGGTTGCCTTCATA GCCAAGCCCAAGAGCAGGGCGGCCTACACCGGCCTCCTCGGGGCTGTCTATGGCGTGGCCAGCGTTCTCGGCCCC CTCTTGGGCGGCGTCTTCTCCGGCGCCACTACTTGGAGATGGTGCTTCTATATCAATCTCCCGATAGGCGCCCTC CCAGTCGGCACAATCGTCTTCCTTTTCCACCCTCCCAAGGCGGCCAAGCCGCAGGAGGCAACGCTCAAGGAGAAG CTTCTCCAGATGGACCCTCTCGGGACCAGCTTCATGATGGGCGCCATCATCACCTATCTCATTGCCGTCAACTAC GGCGGCCAGACGTACCCGTGGTCTTCGTCCATGGTCATCGGTCTTCTCGTCGGCTCGGGCCTCCTCGCCATTGCC TTTGGGCTGTGCGAGTTTTGGCAGGACGAGCGGGCCATCGTCATCCCCAGGCTGATCGGCAAGCGCGAAATCGGA CTGTCGGCATTCTTCTCCATCATGCAGTCGGGGGCCTTCTACTGCATGATCTATTACCTGCCCATCTATTTCCAG GCCATCAGAGGTAGCGACCCCATCATGTCGGGCGTGCAGAACCTGCCGTTCATCCTGGCCGCCATGCTGGGCGCC CTCAGCGCCGGCATCTTCATCTCGAGAACGGGCATGTCGACCATAGTCATGGTCGGCGGCGCGGGCCTGGGGGTG CTTGGTAGCGGCCTGTGCTACACGCTTGACAGGAACACGTCGACGGGCGCCTGGGTCGGATACCAGATCGTGGCC GGACTCGGCCTCGGCGGTGCCATGCAGATCCCCGTCATTGTCTGCCAGGTCAGCGTCGAGCTGGTTGACCTGTCC TCGGCCACGGCCATGATCCTGTGCTTCCAGACTCTGGGCGGCGCCATCTGGCTATCGGCTGCCCAGTCGGCCTTT GTCAACAGGATGTTGCTCGCTGTGCCCAACACGGCCCCGGGCGTGGACCCGATGCGCGTCGTGGCCACCGGCGCC GGCCAGCTGCACAAGGCCTTTAGGGAAGACGAGCTGGCAGGGGTGCTGGCCGCCTATCTCGACGGCATCAAGATA GCCTTCGTGCTCTCGTGCGCCATCGTAGGCGCCGCGTTCGTGCTCGGATTGTTTCTGCCATGGAGGCGGCATGAC ACGGCCGCTATTCAGAACAGTGCCGGGGCTGCATGA |
| Transcript | >Hirsu2|10375 ATGGACTCCAAAGGGACGCCAGAGACCCAGAGCGCCAAGGGGGCCGAGGCCATGCCACGGCCGGCCAACAGACTG CGGCCCGGCATGAGGACGTCGACGATTGGGGCCGAGGAACTGTCCGTCTTCAGCCCTCTCGAGGTGACGCAGATC ACCGCCTTGGACTTCGTCTTTCCCTCGCGGAGGGTAAGCTGGCGCCAGTCCGTCCTCAGCGACGGGGGACTGAGC GCTCAGTTCCCGGCTCGGACGCCCAAGGGCCAGCTGCGTCCCGACTCCTATCTGGGCCACCAGAGCCGACTCGAG CCCCTTCACGACCCAGACTCGGACGGCCAGTCCGGCTTGTCCCGACACTCAGGAGGGGAGGCCGACCTCGAGTTT CTGGACTTGGAGGATGAGCAAGAGTATCCCACCGGGGCCAAACTGTTCATCATGATCGCCGCCCTGGTCTTTAGC ATCTTCCTCATCGCTCTTGACATGGCAACCATCACGGACGAGTTCAAGGGCCTTCAGGACGTGGCGTGGTACGGA GCCGTCTTTTTCATGACCGCCGGCGGCTTTCAATCCACCTGGGGCAAGACGTACAAGTTTTTCCCCCTCAAGATC GCCTTCTTGACCGCAATCTTCATCTTCGAGGTCGGCAGTCTGATATGCGGAGTGGCGCCGTCGTCGACCGTCTTC ATCATTGGTCGGGCCATTGCAGGCATCGGGGCCGCAGGCGTCGGCTCGGGCTCCTACACCATGGTTGCCTTCATA GCCAAGCCCAAGAGCAGGGCGGCCTACACCGGCCTCCTCGGGGCTGTCTATGGCGTGGCCAGCGTTCTCGGCCCC CTCTTGGGCGGCGTCTTCTCCGGCGCCACTACTTGGAGATGGTGCTTCTATATCAATCTCCCGATAGGCGCCCTC CCAGTCGGCACAATCGTCTTCCTTTTCCACCCTCCCAAGGCGGCCAAGCCGCAGGAGGCAACGCTCAAGGAGAAG CTTCTCCAGATGGACCCTCTCGGGACCAGCTTCATGATGGGCGCCATCATCACCTATCTCATTGCCGTCAACTAC GGCGGCCAGACGTACCCGTGGTCTTCGTCCATGGTCATCGGTCTTCTCGTCGGCTCGGGCCTCCTCGCCATTGCC TTTGGGCTGTGCGAGTTTTGGCAGGACGAGCGGGCCATCGTCATCCCCAGGCTGATCGGCAAGCGCGAAATCGGA CTGTCGGCATTCTTCTCCATCATGCAGTCGGGGGCCTTCTACTGCATGATCTATTACCTGCCCATCTATTTCCAG GCCATCAGAGGTAGCGACCCCATCATGTCGGGCGTGCAGAACCTGCCGTTCATCCTGGCCGCCATGCTGGGCGCC CTCAGCGCCGGCATCTTCATCTCGAGAACGGGCATGTCGACCATAGTCATGGTCGGCGGCGCGGGCCTGGGGGTG CTTGGTAGCGGCCTGTGCTACACGCTTGACAGGAACACGTCGACGGGCGCCTGGGTCGGATACCAGATCGTGGCC GGACTCGGCCTCGGCGGTGCCATGCAGATCCCCGTCATTGTCTGCCAGGTCAGCGTCGAGCTGGTTGACCTGTCC TCGGCCACGGCCATGATCCTGTGCTTCCAGACTCTGGGCGGCGCCATCTGGCTATCGGCTGCCCAGTCGGCCTTT GTCAACAGGATGTTGCTCGCTGTGCCCAACACGGCCCCGGGCGTGGACCCGATGCGCGTCGTGGCCACCGGCGCC GGCCAGCTGCACAAGGCCTTTAGGGAAGACGAGCTGGCAGGGGTGCTGGCCGCCTATCTCGACGGCATCAAGATA GCCTTCGTGCTCTCGTGCGCCATCGTAGGCGCCGCGTTCGTGCTCGGATTGTTTCTGCCATGGAGGCGGCATGAC ACGGCCGCTATTCAGAACAGTGCCGGGGCTGCATGA |
| Gene | >Hirsu2|10375 ATGGACTCCAAAGGGACGCCAGAGACCCAGAGCGCCAAGGGGGCCGAGGCCATGCCACGGCCGGCCAACAGACTG CGGCCCGGCATGAGGACGTCGACGATTGGGGCCGAGGAACTGTCCGTCTTCAGCCCTCTCGAGGTGACGCAGATC ACCGCCTTGGACTTCGTCTTTCCCTCGCGGAGGGTAAGCTGGCGCCAGTCCGTCCTCAGCGACGGGGGACTGAGC GCTCAGTTCCCGGCTCGGACGCCCAAGGGCCAGCTGCGTCCCGACTCCTATCTGGGCCACCAGAGCCGACTCGAG CCCCTTCACGACCCAGACTCGGACGGCCAGTCCGGCTTGTCCCGACACTCAGGAGGGGAGGCCGACCTCGAGTTT CTGGACTTGGAGGATGAGCAAGAGTATCCCACCGGGGCCAAACTGTTCATCATGATCGCCGCCCTGGTCTTTAGC ATCTTCCTCATCGCTCTTGACATGGCAAGTCTTTCTCTAACCCCTGAACCAGTGCCGCGGACCGCCTTTTCCCGT CGCTAACGCGATAGTCGTTCCTGTCAATGTCAACAGACCATCGTAGCCACGGCCATCCCAGCCATCACGGACGAG TTCAAGGGCCTTCAGGACGTGGCGTGGTACGGAGCCGTCTTTTTCATGACCGCCGGCGGCTTTCAATCCACCTGG GGCAAGACGTACAAGTTTTTCCCCCTCAAGATCGCCTTCTTGACCGCAATCTTCATCTTCGAGGTCGGCAGTCTG ATATGCGGAGTGGCGCCGTCGTCGACCGTCTTCATCATTGGTCGGGCCATTGCAGGCATCGGGGCCGCAGGCGTC GGCTCGGGCTCCTACACCATGGTTGCCTTCATAGCCAAGCCCAAGAGCAGGGCGGCCTACACCGGCCTCCTCGGG GCTGTCTATGGCGTGGCCAGCGTTCTCGGCCCCCTCTTGGGCGGCGTCTTCTCCGGCGCCACTACTTGGAGATGG TGAGTTGTCGTCCGCTTGGGTGCCCGTCGGAGTCGGTCGTCGAGGATGCGCGGCTGCTAGAGCTGACGGTGCACA GGTGCTTCTATATCAATCTCCCGATAGGCGCCCTCCCAGTCGGCACAATCGTCTTCCTTTTCCACCCTCCCAAGG CGGCCAAGCCGCAGGAGGCAACGCTCAAGGAGAAGCTTCTCCAGATGGACCCTCTCGGGACCAGCTTCATGATGG GCGCCATCATCACCTATCTCATTGCCGTCAACTACGGCGGCCAGACGTACCCGTGGTCTTCGTCCATGGTCATCG GTCTTCTCGTCGGCTCGGGCCTCCTCGCCATTGCCTTTGGGCTGTGCGAGTTTTGGCAGGACGAGCGGGCCATCG TCATCCCCAGGCTGATCGGCAAGCGCGAAATCGGACTGTCGGCATTCTTCTCCATCATGCAGTCGGGGGCCTTCT ACTGCATGATCTATTACCTGCCCATCTATTTCCAGGCCATCAGAGGTAGCGACCCCATCATGTCGGGCGTGCAGA ACCTGCCGTTCATCCTGGCCGCCATGCTGGGCGCCCTCAGCGCCGGCATCTTCATCTCGAGAACGGGCATGTCGA CCATAGTCATGGTCGGCGGCGCGGGCCTGGGGGTGCTTGGTAGCGGCCTGTGCTACACGCTTGACAGGAACACGT CGACGGGCGCCTGGGTCGGATACCAGATCGTGGCCGGACTCGGCCTCGGCGGTGCCATGCAGATCCCCGTCATTG TCTGCCAGGTCAGCGTCGAGCTGGTTGACCTGTCCTCGGCCACGGCCATGATCCTGTGCTTCCAGACTCTGGGCG GCGCCATCTGGCTATCGGCTGCCCAGTCGGCCTTTGTCAACAGGATGTTGCTCGCTGTGCCCAACACGGCCCCGG GCGTGGACCCGATGCGCGTCGTGGCCACCGGCGCCGGCCAGCTGCACAAGGCCTTTAGGGAAGACGAGCTGGCAG GGGTGCTGGCCGCCTATCTCGACGGCATCAAGATAGCCTTCGTGCTCTCGTGCGCCATCGTAGGCGCCGCGTTCG TGCTCGGATTGTTTCTGCCATGGAGGCGGCATGACACGGCCGCTATTCAGAACAGTGCCGGGGCTGCATGA |