© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1037 |
| Gene name | |
| Location | Contig_1213:6639..7463 |
| Strand | + |
| Gene length (bp) | 824 |
| Transcript length (bp) | 540 |
| Coding sequence length (bp) | 540 |
| Protein length (aa) | 180 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8DQN5|ZMPB_STRR6 | Zinc metalloprotease ZmpB OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=zmpB PE=3 SV=1 | 22 | 168 | 8.0E-06 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.2521 | 0.9152 | 0.1558 | 0.0348 | 0.0524 | 0.0168 | 0.0233 | 0.0073 | 0.0296 | 0.0133 |
| Orthofinder run ID | 4 |
| Orthogroup | 8468 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|1037 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1037 MAPDSSALKPSTPPGPPKRGRGRLRKSLVEDEVVQAPDREPEQQPEPPADVPQSERSRRGRRRQHQKEQQEEQPE QPESEPEPEPQQPQPQQPQQPQRQKRRQRKPEPEPEPEPEPEPEPELEPEPEPEPHQPDPKEKKQHRERRRQRQD KEAQVTEPSTTTAAAEKEPRRMRTRPSAS* |
| Coding | >Hirsu2|1037 ATGGCGCCCGACTCCTCTGCCCTCAAACCCTCAACGCCTCCCGGTCCGCCCAAAAGGGGTAGAGGCCGCCTGCGC AAGTCGCTCGTCGAAGACGAGGTTGTTCAGGCGCCGGATCGGGAGCCGGAGCAGCAGCCGGAGCCGCCTGCGGAT GTGCCACAGAGTGAACGGTCGCGGAGGGGACGCAGACGGCAGCATCAGAAGGAACAGCAGGAGGAGCAGCCTGAG CAGCCGGAGTCGGAGCCGGAGCCGGAGCCGCAGCAGCCGCAGCCGCAGCAGCCGCAGCAGCCACAGCGGCAGAAG CGACGACAACGAAAGCCTGAGCCTGAGCCCGAGCCCGAGCCGGAGCCCGAGCCTGAGCCTGAGCTCGAGCCCGAG CCCGAGCCCGAGCCTCATCAGCCGGACCCAAAGGAGAAGAAGCAGCACCGGGAACGACGACGGCAGCGGCAAGAC AAAGAGGCACAAGTGACGGAGCCCAGCACGACGACGGCCGCGGCGGAGAAGGAGCCGCGCAGGATGAGAACTCGC CCCAGCGCCTCGTAG |
| Transcript | >Hirsu2|1037 ATGGCGCCCGACTCCTCTGCCCTCAAACCCTCAACGCCTCCCGGTCCGCCCAAAAGGGGTAGAGGCCGCCTGCGC AAGTCGCTCGTCGAAGACGAGGTTGTTCAGGCGCCGGATCGGGAGCCGGAGCAGCAGCCGGAGCCGCCTGCGGAT GTGCCACAGAGTGAACGGTCGCGGAGGGGACGCAGACGGCAGCATCAGAAGGAACAGCAGGAGGAGCAGCCTGAG CAGCCGGAGTCGGAGCCGGAGCCGGAGCCGCAGCAGCCGCAGCCGCAGCAGCCGCAGCAGCCACAGCGGCAGAAG CGACGACAACGAAAGCCTGAGCCTGAGCCCGAGCCCGAGCCGGAGCCCGAGCCTGAGCCTGAGCTCGAGCCCGAG CCCGAGCCCGAGCCTCATCAGCCGGACCCAAAGGAGAAGAAGCAGCACCGGGAACGACGACGGCAGCGGCAAGAC AAAGAGGCACAAGTGACGGAGCCCAGCACGACGACGGCCGCGGCGGAGAAGGAGCCGCGCAGGATGAGAACTCGC CCCAGCGCCTCGTAG |
| Gene | >Hirsu2|1037 ATGGTACGATCAACCGTTCAATGACGAACGCTCCTCATTCCCGTGAACACCATCCGACTGACGATTTCGAGACTG ACACGACGACATACGCAGGCGCCCGACTCCTCTGCCCTCAAACGTAAGCGCGGTCGGCCGTCGCTCCAAGCGTCT AAACAACATCAACAGGCGGACGCGTCGCAAAACCCCAGTGCTGTCGGCGCCGAAGCCGAAGGCCGACCGAGGAAG CGCGGCCGGATGGCGGCAACTGAAGCAAAAAATGCCGTAGCCTCAACGCCTCCCGGTCCGCCCAAAAGGGGTAGA GGCCGCCTGCGCAAGTCGCTCGTCGAAGACGAGGTTGTTCAGGCGCCGGATCGGGAGCCGGAGCAGCAGCCGGAG CCGCCTGCGGATGTGCCACAGAGTGAACGGTCGCGGAGGGGACGCAGACGGCAGCATCAGAAGGAACAGCAGGAG GAGCAGCCTGAGCAGCCGGAGTCGGAGCCGGAGCCGGAGCCGCAGCAGCCGCAGCCGCAGCAGCCGCAGCAGCCA CAGCGGCAGAAGCGACGACAACGAAAGCCTGAGCCTGAGCCCGAGCCCGAGCCGGAGCCCGAGCCTGAGCCTGAG CTCGAGCCCGAGCCCGAGCCCGAGCCTCATCAGCCGGACCCAAAGGAGAAGAAGCAGCACCGGGAACGACGACGG CAGCGGCAAGACAAAGAGGCACAAGTGACGGAGCCCAGCACGACGACGGCCGCGGCGGAGAAGGAGCCGCGCAGG ATGAGAACTCGCCGTTCCTTGGACAATCGTCAAGATCAAGACACGCCTCAATCCGCGCAGCCAGCGCCTCGTAG |