Protein ID | Hirsu2|10363 |
Gene name | |
Location | Contig_83:22407..23655 |
Strand | + |
Gene length (bp) | 1248 |
Transcript length (bp) | 1248 |
Coding sequence length (bp) | 1248 |
Protein length (aa) | 416 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1878 | 0.0916 | 0.8996 | 0.2046 | 0.06 | 0.053 | 0.2168 | 0.3669 | 0.127 | 0.0033 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 16 | 0.979348 |
Orthofinder run ID | 4 |
Orthogroup | 29 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10363 MKLFLLIAVFTFGAFGSVEVQMTEYGEARMRAKVAQLQRDMKIVFNENQPIRNFKIMTEHTCWVNVALCGGGTTF AEDWRMTQFRKGPNGFLIRDPQHSINATVFMRRHVVGRVLNYMQGPGSYTTTREKSSVTVESTTAGWTVGAQLSL GTFDPARGGGGLGATISGSYSSQTTNGTQVTLGESDRIDCPPNYVCWIEAWVAYVRITGICQIFAMVACGGDSVD PCTTFDDDRKLNNDCEQVTLWRDRVCRSKFRDCEVTTPLMDGDTPWVAEVALSVEEEEYKPPEISGYKSGYYQLG SDCYRYRPSTDAKKRYWKCREQGGKESWYKNKAYPDLEDQVSKFRHEVPEIIRSEDNCYLLDSEEWYCPNSKGDK KYYSLVLGTHYAKPTAPEPDVKSFVEAQKANKNKPEADEK* |
Coding | >Hirsu2|10363 ATGAAGCTTTTTCTGCTGATTGCTGTCTTCACCTTTGGAGCCTTTGGCTCGGTGGAGGTTCAGATGACGGAGTAC GGCGAGGCGCGCATGAGGGCCAAGGTGGCCCAGTTACAACGCGACATGAAAATCGTCTTCAATGAAAATCAACCG ATTCGCAATTTCAAGATAATGACGGAACATACATGTTGGGTCAACGTTGCACTCTGTGGGGGAGGGACTACTTTC GCGGAAGACTGGCGAATGACCCAGTTCCGAAAGGGCCCCAATGGGTTCCTCATCCGCGACCCCCAGCACTCTATA AACGCGACCGTCTTCATGAGGCGCCACGTGGTGGGCAGAGTGCTGAACTACATGCAAGGCCCTGGGTCGTACACG ACAACCAGAGAAAAGTCTTCCGTCACCGTCGAAAGCACCACAGCCGGCTGGACCGTCGGCGCACAGTTGAGCCTA GGAACGTTCGATCCGGCACGCGGTGGTGGCGGCCTGGGCGCCACTATTTCCGGATCCTACTCCAGCCAGACGACC AATGGGACGCAAGTGACGTTAGGGGAGTCCGATCGTATTGACTGCCCCCCTAACTACGTCTGTTGGATCGAGGCT TGGGTGGCCTACGTGAGGATAACCGGAATCTGCCAGATCTTTGCGATGGTCGCCTGCGGTGGTGATTCGGTCGAC CCCTGCACCACCTTCGACGATGATAGAAAATTGAACAACGATTGCGAGCAGGTCACTCTCTGGCGTGATCGGGTC TGCAGAAGCAAATTTCGAGACTGCGAAGTGACAACTCCTCTAATGGACGGGGATACGCCGTGGGTAGCCGAAGTT GCTTTGAGTGTGGAGGAAGAAGAGTATAAGCCGCCCGAGATCAGTGGCTATAAATCCGGATACTACCAGCTAGGC TCCGACTGCTACCGCTATAGACCGTCTACAGACGCCAAGAAGCGGTACTGGAAGTGCAGGGAACAGGGAGGAAAG GAATCTTGGTACAAGAACAAGGCCTACCCTGATCTTGAGGATCAGGTTTCCAAATTCAGGCACGAGGTCCCCGAA ATCATACGGTCAGAGGACAACTGCTACCTACTCGACTCGGAGGAGTGGTACTGCCCTAATTCGAAGGGAGATAAG AAATACTATAGCCTGGTCTTGGGGACACATTACGCGAAACCGACCGCACCTGAGCCGGACGTCAAATCGTTCGTC GAGGCTCAGAAGGCGAACAAGAATAAGCCCGAAGCGGATGAGAAGTAA |
Transcript | >Hirsu2|10363 ATGAAGCTTTTTCTGCTGATTGCTGTCTTCACCTTTGGAGCCTTTGGCTCGGTGGAGGTTCAGATGACGGAGTAC GGCGAGGCGCGCATGAGGGCCAAGGTGGCCCAGTTACAACGCGACATGAAAATCGTCTTCAATGAAAATCAACCG ATTCGCAATTTCAAGATAATGACGGAACATACATGTTGGGTCAACGTTGCACTCTGTGGGGGAGGGACTACTTTC GCGGAAGACTGGCGAATGACCCAGTTCCGAAAGGGCCCCAATGGGTTCCTCATCCGCGACCCCCAGCACTCTATA AACGCGACCGTCTTCATGAGGCGCCACGTGGTGGGCAGAGTGCTGAACTACATGCAAGGCCCTGGGTCGTACACG ACAACCAGAGAAAAGTCTTCCGTCACCGTCGAAAGCACCACAGCCGGCTGGACCGTCGGCGCACAGTTGAGCCTA GGAACGTTCGATCCGGCACGCGGTGGTGGCGGCCTGGGCGCCACTATTTCCGGATCCTACTCCAGCCAGACGACC AATGGGACGCAAGTGACGTTAGGGGAGTCCGATCGTATTGACTGCCCCCCTAACTACGTCTGTTGGATCGAGGCT TGGGTGGCCTACGTGAGGATAACCGGAATCTGCCAGATCTTTGCGATGGTCGCCTGCGGTGGTGATTCGGTCGAC CCCTGCACCACCTTCGACGATGATAGAAAATTGAACAACGATTGCGAGCAGGTCACTCTCTGGCGTGATCGGGTC TGCAGAAGCAAATTTCGAGACTGCGAAGTGACAACTCCTCTAATGGACGGGGATACGCCGTGGGTAGCCGAAGTT GCTTTGAGTGTGGAGGAAGAAGAGTATAAGCCGCCCGAGATCAGTGGCTATAAATCCGGATACTACCAGCTAGGC TCCGACTGCTACCGCTATAGACCGTCTACAGACGCCAAGAAGCGGTACTGGAAGTGCAGGGAACAGGGAGGAAAG GAATCTTGGTACAAGAACAAGGCCTACCCTGATCTTGAGGATCAGGTTTCCAAATTCAGGCACGAGGTCCCCGAA ATCATACGGTCAGAGGACAACTGCTACCTACTCGACTCGGAGGAGTGGTACTGCCCTAATTCGAAGGGAGATAAG AAATACTATAGCCTGGTCTTGGGGACACATTACGCGAAACCGACCGCACCTGAGCCGGACGTCAAATCGTTCGTC GAGGCTCAGAAGGCGAACAAGAATAAGCCCGAAGCGGATGAGAAGTAA |
Gene | >Hirsu2|10363 ATGAAGCTTTTTCTGCTGATTGCTGTCTTCACCTTTGGAGCCTTTGGCTCGGTGGAGGTTCAGATGACGGAGTAC GGCGAGGCGCGCATGAGGGCCAAGGTGGCCCAGTTACAACGCGACATGAAAATCGTCTTCAATGAAAATCAACCG ATTCGCAATTTCAAGATAATGACGGAACATACATGTTGGGTCAACGTTGCACTCTGTGGGGGAGGGACTACTTTC GCGGAAGACTGGCGAATGACCCAGTTCCGAAAGGGCCCCAATGGGTTCCTCATCCGCGACCCCCAGCACTCTATA AACGCGACCGTCTTCATGAGGCGCCACGTGGTGGGCAGAGTGCTGAACTACATGCAAGGCCCTGGGTCGTACACG ACAACCAGAGAAAAGTCTTCCGTCACCGTCGAAAGCACCACAGCCGGCTGGACCGTCGGCGCACAGTTGAGCCTA GGAACGTTCGATCCGGCACGCGGTGGTGGCGGCCTGGGCGCCACTATTTCCGGATCCTACTCCAGCCAGACGACC AATGGGACGCAAGTGACGTTAGGGGAGTCCGATCGTATTGACTGCCCCCCTAACTACGTCTGTTGGATCGAGGCT TGGGTGGCCTACGTGAGGATAACCGGAATCTGCCAGATCTTTGCGATGGTCGCCTGCGGTGGTGATTCGGTCGAC CCCTGCACCACCTTCGACGATGATAGAAAATTGAACAACGATTGCGAGCAGGTCACTCTCTGGCGTGATCGGGTC TGCAGAAGCAAATTTCGAGACTGCGAAGTGACAACTCCTCTAATGGACGGGGATACGCCGTGGGTAGCCGAAGTT GCTTTGAGTGTGGAGGAAGAAGAGTATAAGCCGCCCGAGATCAGTGGCTATAAATCCGGATACTACCAGCTAGGC TCCGACTGCTACCGCTATAGACCGTCTACAGACGCCAAGAAGCGGTACTGGAAGTGCAGGGAACAGGGAGGAAAG GAATCTTGGTACAAGAACAAGGCCTACCCTGATCTTGAGGATCAGGTTTCCAAATTCAGGCACGAGGTCCCCGAA ATCATACGGTCAGAGGACAACTGCTACCTACTCGACTCGGAGGAGTGGTACTGCCCTAATTCGAAGGGAGATAAG AAATACTATAGCCTGGTCTTGGGGACACATTACGCGAAACCGACCGCACCTGAGCCGGACGTCAAATCGTTCGTC GAGGCTCAGAAGGCGAACAAGAATAAGCCCGAAGCGGATGAGAAGTAA |