Protein ID | Hirsu2|10360 |
Gene name | |
Location | Contig_83:15259..16753 |
Strand | - |
Gene length (bp) | 1494 |
Transcript length (bp) | 1350 |
Coding sequence length (bp) | 1350 |
Protein length (aa) | 450 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04678 | MCU | Mitochondrial calcium uniporter | 9.0E-24 | 223 | 345 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q8VYR0|MCU5_ARATH | Calcium uniporter protein 5, mitochondrial OS=Arabidopsis thaliana GN=At1g57610 PE=2 SV=1 | 237 | 345 | 6.0E-13 |
sp|F4I111|MCU6_ARATH | Calcium uniporter protein 6, mitochondrial OS=Arabidopsis thaliana GN=At1g09575 PE=2 SV=1 | 233 | 366 | 7.0E-12 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 41 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 262 | 281 | 19 |
2 | 291 | 310 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10360 MLAPVGETTQTATQDQEHRTTAAKSQQRKVYDRPWLRESSNALPKATSQDPAGGDATKGRLLTTPTRLLKLILPM PFHPEQEHINATEEERRQWSEQKIEPLALLVHPQQPLSYLELLIQAEIPPVRQDGGRVRLPEVVFRAESGGDEAG SGSAEEAPGGNVAPYSGLGREGPSKRQAKWVRWSSSTEVGDFIRDAARGREFAIDIEGLEQELRVAVPSFKDRTY YMRMRLRKMSRQIDRMSRVKKECDLLAHQGAYRLAKGGFAALAGWWGIVYYVTFHTDMGWDLVEPVTYLAGLTTI MGGYLWFLFISRDLSYKAAMNVTVTRRQNALYQERGFDPQKWEQLVHEANMLRREVRLAATEYDVEWDEMADLGG EEVRQALEQESKDGEEKKKKKKKTKRHDGDEEEENEEDEDDDGEDDGHHGGDKGKPSGRHGGGKDASAKTSKRG* |
Coding | >Hirsu2|10360 ATGTTGGCGCCTGTCGGAGAAACGACGCAGACGGCGACGCAGGACCAAGAGCATCGGACGACGGCGGCCAAGAGC CAGCAGAGAAAAGTGTACGACCGGCCGTGGCTGCGCGAGAGCAGCAATGCCCTGCCCAAGGCCACGTCGCAAGAC CCGGCGGGCGGCGACGCCACCAAAGGACGGCTGTTGACGACGCCGACGCGGCTGCTCAAGCTCATCCTCCCGATG CCCTTCCACCCCGAGCAGGAGCACATCAACGCGACGGAGGAGGAGCGGCGGCAGTGGAGCGAGCAGAAGATCGAA CCGCTGGCCCTCCTCGTCCACCCACAACAGCCGCTCTCGTACCTGGAGCTGCTGATACAGGCCGAGATACCGCCG GTGCGGCAGGACGGCGGGCGGGTGCGGCTGCCGGAGGTCGTCTTCCGGGCCGAGTCGGGGGGCGACGAGGCAGGC TCCGGGTCTGCCGAGGAGGCTCCGGGGGGCAACGTGGCGCCGTACTCGGGCCTCGGGCGCGAGGGCCCGAGCAAG AGGCAGGCGAAATGGGTGCGATGGAGCAGCAGCACCGAGGTGGGCGACTTCATCCGCGACGCGGCGCGGGGCCGC GAGTTCGCCATCGACATCGAGGGCCTGGAGCAGGAGCTACGGGTGGCAGTGCCGAGCTTCAAGGACCGGACGTAC TACATGCGGATGCGGCTGCGCAAGATGTCGCGGCAGATCGACCGCATGTCGCGCGTCAAGAAGGAGTGCGACCTG CTGGCGCACCAGGGCGCGTACCGGCTGGCCAAGGGCGGCTTCGCGGCGCTGGCCGGCTGGTGGGGGATCGTCTAC TACGTCACCTTCCACACCGACATGGGCTGGGACCTGGTCGAGCCGGTGACGTACCTGGCCGGCCTGACGACCATC ATGGGCGGCTACCTCTGGTTCCTCTTCATCAGCCGCGACCTGAGCTACAAGGCGGCCATGAACGTGACGGTGACG CGCCGCCAGAACGCCCTCTACCAGGAGCGCGGCTTCGACCCGCAGAAGTGGGAGCAGCTGGTGCACGAGGCCAAC ATGCTGCGGCGCGAGGTGCGCTTGGCCGCGACCGAGTACGACGTCGAGTGGGACGAGATGGCCGACCTGGGCGGC GAGGAGGTGCGCCAGGCGCTCGAGCAGGAGAGCAAGGACGGGGAGGAGAAGAAGAAGAAGAAGAAGAAGACGAAG CGGCACGACGGCGACGAGGAGGAGGAGAATGAGGAGGATGAGGACGACGACGGCGAAGACGACGGGCACCACGGC GGCGACAAGGGCAAGCCGAGCGGGCGCCATGGCGGAGGCAAGGACGCGTCGGCGAAGACGAGCAAGCGAGGATGA |
Transcript | >Hirsu2|10360 ATGTTGGCGCCTGTCGGAGAAACGACGCAGACGGCGACGCAGGACCAAGAGCATCGGACGACGGCGGCCAAGAGC CAGCAGAGAAAAGTGTACGACCGGCCGTGGCTGCGCGAGAGCAGCAATGCCCTGCCCAAGGCCACGTCGCAAGAC CCGGCGGGCGGCGACGCCACCAAAGGACGGCTGTTGACGACGCCGACGCGGCTGCTCAAGCTCATCCTCCCGATG CCCTTCCACCCCGAGCAGGAGCACATCAACGCGACGGAGGAGGAGCGGCGGCAGTGGAGCGAGCAGAAGATCGAA CCGCTGGCCCTCCTCGTCCACCCACAACAGCCGCTCTCGTACCTGGAGCTGCTGATACAGGCCGAGATACCGCCG GTGCGGCAGGACGGCGGGCGGGTGCGGCTGCCGGAGGTCGTCTTCCGGGCCGAGTCGGGGGGCGACGAGGCAGGC TCCGGGTCTGCCGAGGAGGCTCCGGGGGGCAACGTGGCGCCGTACTCGGGCCTCGGGCGCGAGGGCCCGAGCAAG AGGCAGGCGAAATGGGTGCGATGGAGCAGCAGCACCGAGGTGGGCGACTTCATCCGCGACGCGGCGCGGGGCCGC GAGTTCGCCATCGACATCGAGGGCCTGGAGCAGGAGCTACGGGTGGCAGTGCCGAGCTTCAAGGACCGGACGTAC TACATGCGGATGCGGCTGCGCAAGATGTCGCGGCAGATCGACCGCATGTCGCGCGTCAAGAAGGAGTGCGACCTG CTGGCGCACCAGGGCGCGTACCGGCTGGCCAAGGGCGGCTTCGCGGCGCTGGCCGGCTGGTGGGGGATCGTCTAC TACGTCACCTTCCACACCGACATGGGCTGGGACCTGGTCGAGCCGGTGACGTACCTGGCCGGCCTGACGACCATC ATGGGCGGCTACCTCTGGTTCCTCTTCATCAGCCGCGACCTGAGCTACAAGGCGGCCATGAACGTGACGGTGACG CGCCGCCAGAACGCCCTCTACCAGGAGCGCGGCTTCGACCCGCAGAAGTGGGAGCAGCTGGTGCACGAGGCCAAC ATGCTGCGGCGCGAGGTGCGCTTGGCCGCGACCGAGTACGACGTCGAGTGGGACGAGATGGCCGACCTGGGCGGC GAGGAGGTGCGCCAGGCGCTCGAGCAGGAGAGCAAGGACGGGGAGGAGAAGAAGAAGAAGAAGAAGAAGACGAAG CGGCACGACGGCGACGAGGAGGAGGAGAATGAGGAGGATGAGGACGACGACGGCGAAGACGACGGGCACCACGGC GGCGACAAGGGCAAGCCGAGCGGGCGCCATGGCGGAGGCAAGGACGCGTCGGCGAAGACGAGCAAGCGAGGATGA |
Gene | >Hirsu2|10360 ATGTTGGCGCCTGTCGGTGGGTTCGCGAGGTCCTTTTCAACCTCTCCTTTTACTTTGCGAGACCACAATGCCACC TCGGCAGGAGAAACGACGCAGACGGCGACGCAGGACCAAGAGCATCGGACGACGGCGGCCAAGAGCCAGCAGAGA AAAGTGTACGACCGGCCGTGGCTGCGCGAGAGCAGCAATGCCCTGCCCAAGGCCACGTCGCAAGACCCGGCGGGC GGCGACGCCACCAAAGGTCGGTAGCTGCCCCGGCCGATGCAGAGCAGAGCAGGATAGAGCGATGACGCTGACACG GCCGCATCACCCACTCCAGGACGGCTGTTGACGACGCCGACGCGGCTGCTCAAGCTCATCCTCCCGATGCCCTTC CACCCCGAGCAGGAGCACATCAACGCGACGGAGGAGGAGCGGCGGCAGTGGAGCGAGCAGAAGATCGAACCGCTG GCCCTCCTCGTCCACCCACAACAGCCGCTCTCGTACCTGGAGCTGCTGATACAGGCCGAGATACCGCCGGTGCGG CAGGACGGCGGGCGGGTGCGGCTGCCGGAGGTCGTCTTCCGGGCCGAGTCGGGGGGCGACGAGGCAGGCTCCGGG TCTGCCGAGGAGGCTCCGGGGGGCAACGTGGCGCCGTACTCGGGCCTCGGGCGCGAGGGCCCGAGCAAGAGGCAG GCGAAATGGGTGCGATGGAGCAGCAGCACCGAGGTGGGCGACTTCATCCGCGACGCGGCGCGGGGCCGCGAGTTC GCCATCGACATCGAGGGCCTGGAGCAGGAGCTACGGGTGGCAGTGCCGAGCTTCAAGGACCGGACGTACTACATG CGGATGCGGCTGCGCAAGATGTCGCGGCAGATCGACCGCATGTCGCGCGTCAAGAAGGAGTGCGACCTGCTGGCG CACCAGGGCGCGTACCGGCTGGCCAAGGGCGGCTTCGCGGCGCTGGCCGGCTGGTGGGGGATCGTCTACTACGTC ACCTTCCACACCGACATGGGCTGGGACCTGGTCGAGCCGGTGACGTACCTGGCCGGCCTGACGACCATCATGGGC GGCTACCTCTGGTTCCTCTTCATCAGCCGCGACCTGAGCTACAAGGCGGCCATGAACGTGACGGTGACGCGCCGC CAGAACGCCCTCTACCAGGAGCGCGGCTTCGACCCGCAGAAGTGGGAGCAGCTGGTGCACGAGGCCAACATGCTG CGGCGCGAGGTGCGCTTGGCCGCGACCGAGTACGACGTCGAGTGGGACGAGATGGCCGACCTGGGCGGCGAGGAG GTGCGCCAGGCGCTCGAGCAGGAGAGCAAGGACGGGGAGGAGAAGAAGAAGAAGAAGAAGAAGACGAAGCGGCAC GACGGCGACGAGGAGGAGGAGAATGAGGAGGATGAGGACGACGACGGCGAAGACGACGGGCACCACGGCGGCGAC AAGGGCAAGCCGAGCGGGCGCCATGGCGGAGGCAAGGACGCGTCGGCGAAGACGAGCAAGCGAGGATGA |