Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1036
Gene name
LocationContig_1213:4678..5644
Strand-
Gene length (bp)966
Transcript length (bp)822
Coding sequence length (bp)822
Protein length (aa) 274

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular|Endoplasmic reticulum Signal peptide 0.0675 0.0647 0.679 0.1097 0.3295 0.0493 0.6965 0.1273 0.2637 0.012

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.999365

Transmembrane Domains

Domain # Start End Length
1 213 235 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1205
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|24
Ophiocordyceps australis map64 (Brazil) OphauB2|2685
Ophiocordyceps camponoti-floridani Ophcf2|05770
Ophiocordyceps camponoti-rufipedis Ophun1|6014
Ophiocordyceps kimflemingae Ophio5|5979
Ophiocordyceps subramaniannii Hirsu2|1036 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1036
MRIFASAVVAALPLLASAQEDPFAQYKAQLQTFMNRVVSSIPNPGFHDPVAALEAKVGSMRLSTLTLENWKETLY
EPVKSGATTPEEWWVLITGRNKTCYGHCGKVEQAFNETAAKFALLPGTPHMGYLNCDDQPILCNSWAASTANIWS
FSMLPAPAPVEVLKRKLNLTTTTSSDLVELYSSKGAGDWTPLESWFHPFHGKATELGLSIPYAYTIWAFNLVPNW
LFMVIVSFASRSMMSNRMNNMANQGRRPNGGPRAGAGAGAGAGAAAGR*
Coding >Hirsu2|1036
ATGCGCATCTTCGCCTCTGCCGTCGTCGCGGCTCTGCCGCTGCTCGCGTCCGCTCAGGAGGACCCCTTCGCCCAG
TACAAGGCGCAACTGCAGACCTTCATGAACCGGGTCGTCTCGTCCATCCCGAACCCCGGCTTCCATGACCCCGTC
GCCGCCCTCGAGGCCAAGGTGGGCTCCATGCGGCTATCGACCCTAACGCTCGAGAACTGGAAGGAGACGCTATAC
GAGCCGGTCAAGTCCGGGGCCACGACGCCGGAGGAGTGGTGGGTTCTCATCACCGGGAGGAACAAGACGTGCTAC
GGCCATTGCGGCAAGGTCGAGCAGGCCTTCAACGAGACGGCGGCCAAGTTCGCCCTCCTCCCCGGAACGCCTCAC
ATGGGTTACCTCAACTGCGATGACCAGCCCATTCTCTGCAACAGCTGGGCTGCCAGCACCGCCAACATCTGGTCC
TTCTCCATGCTCCCTGCCCCGGCCCCCGTCGAGGTTCTGAAGCGAAAGCTCAACCTCACGACGACGACCTCGTCC
GATCTCGTCGAGCTGTACAGCAGTAAGGGCGCAGGGGACTGGACACCTCTCGAGTCTTGGTTCCATCCCTTCCAC
GGAAAGGCCACCGAGCTCGGCCTCTCTATTCCCTACGCATACACCATCTGGGCCTTCAACCTCGTTCCCAACTGG
TTGTTCATGGTCATCGTCTCCTTTGCCAGCCGAAGCATGATGTCCAACCGCATGAACAACATGGCGAACCAAGGA
CGACGCCCTAATGGCGGACCAAGAGCTGGAGCCGGGGCCGGGGCCGGAGCCGGGGCTGCCGCTGGTCGCTGA
Transcript >Hirsu2|1036
ATGCGCATCTTCGCCTCTGCCGTCGTCGCGGCTCTGCCGCTGCTCGCGTCCGCTCAGGAGGACCCCTTCGCCCAG
TACAAGGCGCAACTGCAGACCTTCATGAACCGGGTCGTCTCGTCCATCCCGAACCCCGGCTTCCATGACCCCGTC
GCCGCCCTCGAGGCCAAGGTGGGCTCCATGCGGCTATCGACCCTAACGCTCGAGAACTGGAAGGAGACGCTATAC
GAGCCGGTCAAGTCCGGGGCCACGACGCCGGAGGAGTGGTGGGTTCTCATCACCGGGAGGAACAAGACGTGCTAC
GGCCATTGCGGCAAGGTCGAGCAGGCCTTCAACGAGACGGCGGCCAAGTTCGCCCTCCTCCCCGGAACGCCTCAC
ATGGGTTACCTCAACTGCGATGACCAGCCCATTCTCTGCAACAGCTGGGCTGCCAGCACCGCCAACATCTGGTCC
TTCTCCATGCTCCCTGCCCCGGCCCCCGTCGAGGTTCTGAAGCGAAAGCTCAACCTCACGACGACGACCTCGTCC
GATCTCGTCGAGCTGTACAGCAGTAAGGGCGCAGGGGACTGGACACCTCTCGAGTCTTGGTTCCATCCCTTCCAC
GGAAAGGCCACCGAGCTCGGCCTCTCTATTCCCTACGCATACACCATCTGGGCCTTCAACCTCGTTCCCAACTGG
TTGTTCATGGTCATCGTCTCCTTTGCCAGCCGAAGCATGATGTCCAACCGCATGAACAACATGGCGAACCAAGGA
CGACGCCCTAATGGCGGACCAAGAGCTGGAGCCGGGGCCGGGGCCGGAGCCGGGGCTGCCGCTGGTCGCTGA
Gene >Hirsu2|1036
ATGCGCATCTTCGCCTCTGCCGTCGTCGCGGCTCTGCCGCTGCTCGCGTCCGCTCAGGAGGACCCCTTCGCCCAG
TACAAGGCGCAACTGCAGACCTTCATGAACCGGGTCGTCTCGTCCATCCCGAACCCCGGCTTCCATGACCCCGTC
GCCGCCCTCGAGGCCAAGGTGGGCTCCATGCGGCTATCGACCCTAACGCTCGAGAACTGGAAGGAGACGCTATAC
GAGCCGGTCAAGTCCGGGGCCACGACGCCGGAGGAGTGGTGGGTTCTCATCACCGGGAGGAACAAGACGTGCTAC
GGTAAGCTCGCCAGTCTTTGTTGATGACCCGGCGCGTGGTGTGCAGAGAGAGCTGACGCGTGTCGCGCAACCGGC
AGGCCATTGCGGCAAGGTCGAGCAGGCCTTCAACGAGACGGCGGCCAAGTTCGCCCTCCTCCCCGGAACGCCTCA
CATGGGTTACCTCAACTGCGATGACCAGCCCATTCTCTGCAACAGCTGGGCTGCCAGCACCGCCAACATCTGGTC
CTTCTCCATGCTCCCTGCCCCGGCCCCCGTCGAGGTTCTGAAGCGAAAGCTCAACCTCACGACGACGACCTCGTC
CGATCTCGTCGAGCTGTACAGCAGTAAGGGCGCAGGGGACTGGACACCTCTCGAGTCTTGGTTCCATCCCTTCCA
CGGAAAGGCCACCGAGCTCGGCCTCTCTATTCCCTACGCATACACCATCTGGGCCTTCAACCTCGTTCCCAACTG
GTTGTTCATGGTCATCGTCTCCTTTGCCAGCCGAAGCATGATGTGGGTCCCCCTCCTTGGTGCATTGCATCTCCT
CCCTGGCAATGCCCTTCGCTGACGCTCCTCATCAGGTCCAACCGCATGAACAACATGGCGAACCAAGGACGACGC
CCTAATGGCGGACCAAGAGCTGGAGCCGGGGCCGGGGCCGGAGCCGGGGCTGCCGCTGGTCGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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