Protein ID | Hirsu2|1035 |
Gene name | |
Location | Contig_1213:3840..4398 |
Strand | + |
Gene length (bp) | 558 |
Transcript length (bp) | 558 |
Coding sequence length (bp) | 558 |
Protein length (aa) | 186 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09447 | Cnl2_NKP2 | Cnl2/NKP2 family protein | 4.0E-24 | 5 | 68 |
GO Term | Description | Terminal node |
---|---|---|
GO:0000776 | kinetochore | Yes |
GO:0099080 | supramolecular complex | No |
GO:0043226 | organelle | No |
GO:0043229 | intracellular organelle | No |
GO:0005575 | cellular_component | No |
GO:0043228 | non-membrane-bounded organelle | No |
GO:0043232 | intracellular non-membrane-bounded organelle | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | Nuclear localization signal|Nuclear export signal | 0.531 | 0.7728 | 0.05 | 0.0188 | 0.1742 | 0.0017 | 0.0818 | 0.0764 | 0.1038 | 0.0216 |
Orthofinder run ID | 4 |
Orthogroup | 1201 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1035 MAPSESDMLTKYLLQPAPLTAITSWEQFQALFPRPLRASPRLRSLFRDLQAQRNAVVDAVAANIAAETRRGAAMR REVLARRREAERDEADGEIEMERALFGAASSAAQARHTLPSIVPELDGAAGVLEADVRRLRDEEAALLAALGHTV GGLSDLRYGKLANGKLREQVLDGLESLEHACRDEP* |
Coding | >Hirsu2|1035 ATGGCCCCCTCCGAGTCCGACATGCTCACCAAGTACCTGCTCCAGCCGGCGCCGCTGACGGCCATCACCAGCTGG GAGCAGTTCCAGGCGCTGTTCCCGCGACCGCTGCGCGCCTCGCCCCGCCTGCGCTCGCTCTTCCGCGATCTGCAG GCCCAGCGCAACGCCGTCGTCGACGCGGTGGCGGCCAACATCGCGGCCGAGACGAGGCGCGGCGCCGCCATGCGC AGGGAGGTCCTGGCCCGCCGCCGCGAGGCCGAGCGGGACGAGGCCGACGGCGAGATCGAGATGGAGCGCGCCCTC TTCGGCGCCGCCAGCTCCGCCGCCCAGGCCCGGCACACGCTGCCCTCCATCGTGCCCGAGCTCGACGGCGCCGCT GGCGTGCTTGAGGCCGACGTCCGCCGCCTGCGCGACGAGGAGGCCGCGCTGCTCGCCGCCCTCGGCCACACCGTC GGCGGCCTGAGCGATCTCCGCTACGGGAAGCTGGCCAACGGCAAGCTGAGGGAACAGGTCCTCGACGGCCTTGAA TCGCTGGAACATGCGTGCCGCGACGAGCCCTAG |
Transcript | >Hirsu2|1035 ATGGCCCCCTCCGAGTCCGACATGCTCACCAAGTACCTGCTCCAGCCGGCGCCGCTGACGGCCATCACCAGCTGG GAGCAGTTCCAGGCGCTGTTCCCGCGACCGCTGCGCGCCTCGCCCCGCCTGCGCTCGCTCTTCCGCGATCTGCAG GCCCAGCGCAACGCCGTCGTCGACGCGGTGGCGGCCAACATCGCGGCCGAGACGAGGCGCGGCGCCGCCATGCGC AGGGAGGTCCTGGCCCGCCGCCGCGAGGCCGAGCGGGACGAGGCCGACGGCGAGATCGAGATGGAGCGCGCCCTC TTCGGCGCCGCCAGCTCCGCCGCCCAGGCCCGGCACACGCTGCCCTCCATCGTGCCCGAGCTCGACGGCGCCGCT GGCGTGCTTGAGGCCGACGTCCGCCGCCTGCGCGACGAGGAGGCCGCGCTGCTCGCCGCCCTCGGCCACACCGTC GGCGGCCTGAGCGATCTCCGCTACGGGAAGCTGGCCAACGGCAAGCTGAGGGAACAGGTCCTCGACGGCCTTGAA TCGCTGGAACATGCGTGCCGCGACGAGCCCTAG |
Gene | >Hirsu2|1035 ATGGCCCCCTCCGAGTCCGACATGCTCACCAAGTACCTGCTCCAGCCGGCGCCGCTGACGGCCATCACCAGCTGG GAGCAGTTCCAGGCGCTGTTCCCGCGACCGCTGCGCGCCTCGCCCCGCCTGCGCTCGCTCTTCCGCGATCTGCAG GCCCAGCGCAACGCCGTCGTCGACGCGGTGGCGGCCAACATCGCGGCCGAGACGAGGCGCGGCGCCGCCATGCGC AGGGAGGTCCTGGCCCGCCGCCGCGAGGCCGAGCGGGACGAGGCCGACGGCGAGATCGAGATGGAGCGCGCCCTC TTCGGCGCCGCCAGCTCCGCCGCCCAGGCCCGGCACACGCTGCCCTCCATCGTGCCCGAGCTCGACGGCGCCGCT GGCGTGCTTGAGGCCGACGTCCGCCGCCTGCGCGACGAGGAGGCCGCGCTGCTCGCCGCCCTCGGCCACACCGTC GGCGGCCTGAGCGATCTCCGCTACGGGAAGCTGGCCAACGGCAAGCTGAGGGAACAGGTCCTCGACGGCCTTGAA TCGCTGGAACATGCGTGCCGCGACGAGCCCTAG |