Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|1035
Gene name
Location	Contig_1213:3840..4398
Strand	+
Gene length (bp)	558
Transcript length (bp)	558
Coding sequence length (bp)	558
Protein length (aa)	186

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF09447	Cnl2_NKP2	Cnl2/NKP2 family protein	4.0E-24	5	68

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0000776	kinetochore	Yes
GO:0099080	supramolecular complex	No
GO:0043226	organelle	No
GO:0043229	intracellular organelle	No
GO:0005575	cellular_component	No
GO:0043228	non-membrane-bounded organelle	No
GO:0043232	intracellular non-membrane-bounded organelle	No
GO:0110165	cellular anatomical entity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 39	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|1035 MAPSESDMLTKYLLQPAPLTAITSWEQFQALFPRPLRASPRLRSLFRDLQAQRNAVVDAVAANIAAETRRGAAMR REVLARRREAERDEADGEIEMERALFGAASSAAQARHTLPSIVPELDGAAGVLEADVRRLRDEEAALLAALGHTV GGLSDLRYGKLANGKLREQVLDGLESLEHACRDEP*
Coding	>Hirsu2\|1035 ATGGCCCCCTCCGAGTCCGACATGCTCACCAAGTACCTGCTCCAGCCGGCGCCGCTGACGGCCATCACCAGCTGG GAGCAGTTCCAGGCGCTGTTCCCGCGACCGCTGCGCGCCTCGCCCCGCCTGCGCTCGCTCTTCCGCGATCTGCAG GCCCAGCGCAACGCCGTCGTCGACGCGGTGGCGGCCAACATCGCGGCCGAGACGAGGCGCGGCGCCGCCATGCGC AGGGAGGTCCTGGCCCGCCGCCGCGAGGCCGAGCGGGACGAGGCCGACGGCGAGATCGAGATGGAGCGCGCCCTC TTCGGCGCCGCCAGCTCCGCCGCCCAGGCCCGGCACACGCTGCCCTCCATCGTGCCCGAGCTCGACGGCGCCGCT GGCGTGCTTGAGGCCGACGTCCGCCGCCTGCGCGACGAGGAGGCCGCGCTGCTCGCCGCCCTCGGCCACACCGTC GGCGGCCTGAGCGATCTCCGCTACGGGAAGCTGGCCAACGGCAAGCTGAGGGAACAGGTCCTCGACGGCCTTGAA TCGCTGGAACATGCGTGCCGCGACGAGCCCTAG
Transcript	>Hirsu2\|1035 ATGGCCCCCTCCGAGTCCGACATGCTCACCAAGTACCTGCTCCAGCCGGCGCCGCTGACGGCCATCACCAGCTGG GAGCAGTTCCAGGCGCTGTTCCCGCGACCGCTGCGCGCCTCGCCCCGCCTGCGCTCGCTCTTCCGCGATCTGCAG GCCCAGCGCAACGCCGTCGTCGACGCGGTGGCGGCCAACATCGCGGCCGAGACGAGGCGCGGCGCCGCCATGCGC AGGGAGGTCCTGGCCCGCCGCCGCGAGGCCGAGCGGGACGAGGCCGACGGCGAGATCGAGATGGAGCGCGCCCTC TTCGGCGCCGCCAGCTCCGCCGCCCAGGCCCGGCACACGCTGCCCTCCATCGTGCCCGAGCTCGACGGCGCCGCT GGCGTGCTTGAGGCCGACGTCCGCCGCCTGCGCGACGAGGAGGCCGCGCTGCTCGCCGCCCTCGGCCACACCGTC GGCGGCCTGAGCGATCTCCGCTACGGGAAGCTGGCCAACGGCAAGCTGAGGGAACAGGTCCTCGACGGCCTTGAA TCGCTGGAACATGCGTGCCGCGACGAGCCCTAG
Gene	>Hirsu2\|1035 ATGGCCCCCTCCGAGTCCGACATGCTCACCAAGTACCTGCTCCAGCCGGCGCCGCTGACGGCCATCACCAGCTGG GAGCAGTTCCAGGCGCTGTTCCCGCGACCGCTGCGCGCCTCGCCCCGCCTGCGCTCGCTCTTCCGCGATCTGCAG GCCCAGCGCAACGCCGTCGTCGACGCGGTGGCGGCCAACATCGCGGCCGAGACGAGGCGCGGCGCCGCCATGCGC AGGGAGGTCCTGGCCCGCCGCCGCGAGGCCGAGCGGGACGAGGCCGACGGCGAGATCGAGATGGAGCGCGCCCTC TTCGGCGCCGCCAGCTCCGCCGCCCAGGCCCGGCACACGCTGCCCTCCATCGTGCCCGAGCTCGACGGCGCCGCT GGCGTGCTTGAGGCCGACGTCCGCCGCCTGCGCGACGAGGAGGCCGCGCTGCTCGCCGCCCTCGGCCACACCGTC GGCGGCCTGAGCGATCTCCGCTACGGGAAGCTGGCCAACGGCAAGCTGAGGGAACAGGTCCTCGACGGCCTTGAA TCGCTGGAACATGCGTGCCGCGACGAGCCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail