© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10290 |
| Gene name | |
| Location | Contig_817:3133..5043 |
| Strand | - |
| Gene length (bp) | 1910 |
| Transcript length (bp) | 1761 |
| Coding sequence length (bp) | 1761 |
| Protein length (aa) | 587 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00728 | Glyco_hydro_20 | Glycosyl hydrolase family 20, catalytic domain | 1.6E-92 | 194 | 533 |
| PF14845 | Glycohydro_20b2 | beta-acetyl hexosaminidase like | 2.4E-18 | 22 | 169 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4AUH6|HEX1_ARTBC | Beta-hexosaminidase ARB_07893 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07893 PE=1 SV=1 | 17 | 573 | 3.0E-145 |
| sp|Q9SYK0|HEXO2_ARATH | Beta-hexosaminidase 2 OS=Arabidopsis thaliana GN=HEXO2 PE=1 SV=1 | 130 | 575 | 9.0E-79 |
| sp|E9DFH0|HEX1_COCPS | Beta-hexosaminidase 1 OS=Coccidioides posadasii (strain RMSCC 757 / Silveira) GN=HEX1 PE=1 SV=1 | 5 | 575 | 2.0E-72 |
| sp|D4AYT4|HEX2_ARTBC | Probable beta-hexosaminidase ARB_01353 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01353 PE=1 SV=1 | 132 | 575 | 3.0E-69 |
| sp|P43077|HEX1_CANAX | Beta-hexosaminidase OS=Candida albicans GN=HEX1 PE=1 SV=1 | 135 | 573 | 6.0E-69 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4AUH6|HEX1_ARTBC | Beta-hexosaminidase ARB_07893 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07893 PE=1 SV=1 | 17 | 573 | 3.0E-145 |
| sp|Q9SYK0|HEXO2_ARATH | Beta-hexosaminidase 2 OS=Arabidopsis thaliana GN=HEXO2 PE=1 SV=1 | 130 | 575 | 9.0E-79 |
| sp|E9DFH0|HEX1_COCPS | Beta-hexosaminidase 1 OS=Coccidioides posadasii (strain RMSCC 757 / Silveira) GN=HEX1 PE=1 SV=1 | 5 | 575 | 2.0E-72 |
| sp|D4AYT4|HEX2_ARTBC | Probable beta-hexosaminidase ARB_01353 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01353 PE=1 SV=1 | 132 | 575 | 3.0E-69 |
| sp|P43077|HEX1_CANAX | Beta-hexosaminidase OS=Candida albicans GN=HEX1 PE=1 SV=1 | 135 | 573 | 6.0E-69 |
| sp|Q8WSF3|FDL_DROME | Probable beta-hexosaminidase fdl OS=Drosophila melanogaster GN=fdl PE=1 SV=1 | 7 | 576 | 2.0E-68 |
| sp|P49010|HEXC_BOMMO | Chitooligosaccharidolytic beta-N-acetylglucosaminidase OS=Bombyx mori PE=1 SV=1 | 128 | 576 | 3.0E-63 |
| sp|A7WM73|HEXO1_ARATH | Beta-hexosaminidase 1 OS=Arabidopsis thaliana GN=HEXO1 PE=1 SV=1 | 6 | 572 | 2.0E-57 |
| sp|Q8L7S6|HEXO3_ARATH | Beta-hexosaminidase 3 OS=Arabidopsis thaliana GN=HEXO3 PE=1 SV=1 | 22 | 568 | 4.0E-56 |
| sp|Q54K55|HEXB1_DICDI | Beta-hexosaminidase subunit B1 OS=Dictyostelium discoideum GN=hexb1 PE=3 SV=1 | 136 | 569 | 7.0E-56 |
| sp|Q6AXR4|HEXB_RAT | Beta-hexosaminidase subunit beta OS=Rattus norvegicus GN=Hexb PE=2 SV=1 | 1 | 580 | 6.0E-55 |
| sp|P49614|HEXB_FELCA | Beta-hexosaminidase subunit beta OS=Felis catus GN=HEXB PE=2 SV=2 | 136 | 573 | 4.0E-54 |
| sp|P20060|HEXB_MOUSE | Beta-hexosaminidase subunit beta OS=Mus musculus GN=Hexb PE=1 SV=2 | 5 | 573 | 3.0E-53 |
| sp|P07686|HEXB_HUMAN | Beta-hexosaminidase subunit beta OS=Homo sapiens GN=HEXB PE=1 SV=3 | 88 | 575 | 1.0E-50 |
| sp|Q54K56|HEXB2_DICDI | Beta-hexosaminidase subunit B2 OS=Dictyostelium discoideum GN=hexb2 PE=3 SV=1 | 22 | 569 | 4.0E-50 |
| sp|P13723|HEXA1_DICDI | Beta-hexosaminidase subunit A1 OS=Dictyostelium discoideum GN=hexa1 PE=1 SV=1 | 135 | 577 | 6.0E-49 |
| sp|Q29548|HEXB_PIG | Beta-hexosaminidase subunit beta OS=Sus scrofa GN=HEXB PE=1 SV=2 | 136 | 575 | 3.0E-46 |
| sp|Q0V8R6|HEXA_BOVIN | Beta-hexosaminidase subunit alpha OS=Bos taurus GN=HEXA PE=2 SV=1 | 130 | 573 | 3.0E-45 |
| sp|P29416|HEXA_MOUSE | Beta-hexosaminidase subunit alpha OS=Mus musculus GN=Hexa PE=1 SV=2 | 102 | 575 | 8.0E-44 |
| sp|Q641X3|HEXA_RAT | Beta-hexosaminidase subunit alpha OS=Rattus norvegicus GN=Hexa PE=2 SV=1 | 137 | 575 | 2.0E-43 |
| sp|Q5RC84|HEXA_PONAB | Beta-hexosaminidase subunit alpha OS=Pongo abelii GN=HEXA PE=3 SV=1 | 137 | 575 | 2.0E-43 |
| sp|P06865|HEXA_HUMAN | Beta-hexosaminidase subunit alpha OS=Homo sapiens GN=HEXA PE=1 SV=2 | 137 | 575 | 3.0E-43 |
| sp|Q54SC9|HEXA2_DICDI | Beta-hexosaminidase subunit A2 OS=Dictyostelium discoideum GN=hexa2 PE=3 SV=1 | 135 | 577 | 9.0E-42 |
| sp|Q619W7|HEXA_CAEBR | Beta-hexosaminidase A OS=Caenorhabditis briggsae GN=hex-1 PE=3 SV=2 | 111 | 567 | 3.0E-41 |
| sp|Q22492|HEXA_CAEEL | Beta-hexosaminidase A OS=Caenorhabditis elegans GN=hex-1 PE=1 SV=1 | 111 | 567 | 4.0E-40 |
| sp|Q86M34|HEXB_ENTHI | Beta-hexosaminidase subunit beta OS=Entamoeba histolytica GN=HEXB PE=1 SV=1 | 114 | 534 | 4.0E-40 |
| sp|P49009|HEXA_ENTHI | Beta-hexosaminidase subunit alpha OS=Entamoeba histolytica GN=HEXA PE=1 SV=2 | 136 | 532 | 3.0E-37 |
| sp|P96155|HEX1_VIBFU | Beta-hexosaminidase OS=Vibrio furnissii GN=exo I PE=1 SV=1 | 149 | 525 | 4.0E-35 |
| sp|P49008|HEXA_PORGI | Beta-hexosaminidase OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=nahA PE=3 SV=2 | 136 | 551 | 1.0E-30 |
| sp|Q7WUL4|HEX20_CELFI | Beta-N-acetylhexosaminidase OS=Cellulomonas fimi GN=hex20 PE=1 SV=1 | 136 | 536 | 5.0E-29 |
| sp|P13670|CHB_VIBHA | N,N'-diacetylchitobiase OS=Vibrio harveyi GN=chb PE=1 SV=1 | 138 | 531 | 1.0E-21 |
| sp|Q54468|CHB_SERMA | Chitobiase OS=Serratia marcescens GN=chb PE=1 SV=1 | 155 | 377 | 1.0E-19 |
| sp|Q04786|HEX_VIBVL | Beta-hexosaminidase OS=Vibrio vulnificus GN=hex PE=3 SV=1 | 138 | 531 | 6.0E-18 |
| sp|P49007|HEXB_PSEO7 | Beta-hexosaminidase B OS=Pseudoalteromonas piscicida GN=nag096 PE=3 SV=1 | 146 | 355 | 2.0E-13 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 22 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10290 MQPKAAMALVAAAMAPGLVDAIWPAPAQMMTGDRVLFIGRDVKASYNGEPLPCAANGFHRQPGPRFRSRDVIAAG LSRAMAAILEHNFHPWKLRPRHADFEPDVRAKDKTYIESITIVQHGRDGPQAFRPRAGDVDESYALDLSPDGQVR LECRNAVGCLWGLETFIQLFFQHSSGRDWYTPHAPVSIRDAPKFPHRGVLMDVARMWYPVADIKRTIDGMAWSKM NRLHLHATDSQSWPLEIPALPRLAEKGAYRRGLTYSPADLRGICEYAAERGVEVVLEIDMPGHTGVIELAYEDLI VAYNQKPYHWYCAEPPCGAFRMNSSKVYDFVDRLLDDLLPRLAPYSAYFHTGGDELNKNDSALDPGVGSNDQAVI APLLQRFLDRVHARVRRAGMTPFVWEEMVTEWNQTLPNDVVVQSWLGNGAVQKLARAGRKVIDSNFNFWYLDCGR GQWLNFDNGPAFQTYYPFNDWCGPTKSWRLVYANDPTAGLSASAAKNVLGGEVAIWSELLDSTNLDSVLWPRASA AGEVLWSGRQDASGRNRSQYDAAPRLAEFRERMVARGVSAMPVQMIFCTQGDATDCAMLTS* |
| Coding | >Hirsu2|10290 ATGCAGCCCAAGGCTGCCATGGCCCTGGTGGCGGCCGCCATGGCCCCGGGCCTCGTGGACGCGATATGGCCCGCG CCCGCCCAGATGATGACGGGCGACCGGGTCCTCTTTATCGGCAGGGACGTCAAGGCCTCGTACAACGGAGAGCCG CTGCCGTGCGCGGCCAATGGATTCCACAGGCAGCCCGGCCCCCGGTTCCGGAGCCGGGACGTGATCGCGGCCGGC CTCTCGCGCGCCATGGCCGCCATCCTGGAGCACAACTTCCACCCATGGAAGCTGCGGCCGCGCCACGCCGACTTC GAGCCCGACGTGCGGGCCAAGGACAAGACGTACATCGAGTCCATCACGATTGTGCAGCACGGGCGGGACGGCCCG CAGGCGTTCCGGCCTCGGGCGGGCGACGTGGACGAGTCGTACGCGCTCGACCTGTCGCCGGACGGCCAGGTGCGG CTCGAGTGCCGCAACGCGGTCGGCTGCCTCTGGGGCCTTGAGACGTTCATCCAGCTCTTCTTCCAGCACAGCAGC GGGCGCGACTGGTACACGCCTCACGCGCCCGTCTCGATCCGGGACGCACCCAAGTTCCCGCACCGCGGTGTGCTG ATGGACGTGGCGCGGATGTGGTATCCCGTGGCCGACATCAAGCGCACCATCGACGGCATGGCCTGGAGCAAGATG AACCGGCTGCACCTGCACGCGACCGACTCGCAATCGTGGCCTCTGGAGATCCCGGCGCTGCCGCGGCTGGCGGAG AAGGGGGCGTACCGCCGGGGCCTGACGTACTCGCCGGCGGACCTGCGCGGCATCTGCGAGTACGCGGCCGAGCGC GGCGTCGAGGTAGTGCTCGAGATCGACATGCCGGGCCACACGGGCGTCATCGAGCTCGCGTACGAGGACCTCATC GTCGCCTACAACCAGAAGCCGTACCACTGGTACTGCGCCGAGCCGCCGTGCGGGGCGTTCCGGATGAACAGCAGC AAGGTCTACGACTTCGTCGACCGGCTGCTCGACGACCTGCTGCCGAGGCTGGCGCCCTACTCTGCCTACTTCCAC ACCGGCGGCGACGAGCTCAACAAAAACGACTCGGCGCTGGACCCGGGCGTCGGGTCCAACGACCAGGCCGTGATC GCGCCGCTGCTGCAGCGCTTCCTCGACCGCGTGCACGCCCGGGTGCGCAGGGCGGGCATGACGCCCTTTGTGTGG GAGGAGATGGTGACGGAGTGGAACCAGACGCTGCCGAACGACGTCGTGGTGCAGTCGTGGCTGGGCAACGGCGCG GTGCAGAAGCTGGCGAGGGCGGGCCGCAAGGTCATCGACAGCAACTTTAACTTTTGGTATCTCGACTGCGGGCGC GGCCAATGGCTCAACTTCGACAACGGGCCGGCCTTCCAGACGTACTACCCCTTCAACGACTGGTGCGGGCCGACG AAGAGCTGGCGGCTGGTGTACGCCAACGATCCGACGGCCGGACTGTCGGCCTCGGCGGCCAAGAACGTGCTGGGG GGCGAGGTGGCGATATGGAGCGAGCTGCTGGACAGCACCAACCTGGACAGCGTGCTGTGGCCGCGGGCCAGCGCG GCGGGCGAGGTGCTGTGGTCGGGGCGGCAGGACGCGTCGGGCCGGAACCGCAGCCAGTACGACGCGGCGCCGCGG CTGGCCGAGTTCCGCGAGCGCATGGTGGCCCGGGGGGTGTCGGCGATGCCGGTGCAGATGATCTTTTGCACGCAG GGCGACGCAACCGATTGCGCGATGCTGACGTCGTAG |
| Transcript | >Hirsu2|10290 ATGCAGCCCAAGGCTGCCATGGCCCTGGTGGCGGCCGCCATGGCCCCGGGCCTCGTGGACGCGATATGGCCCGCG CCCGCCCAGATGATGACGGGCGACCGGGTCCTCTTTATCGGCAGGGACGTCAAGGCCTCGTACAACGGAGAGCCG CTGCCGTGCGCGGCCAATGGATTCCACAGGCAGCCCGGCCCCCGGTTCCGGAGCCGGGACGTGATCGCGGCCGGC CTCTCGCGCGCCATGGCCGCCATCCTGGAGCACAACTTCCACCCATGGAAGCTGCGGCCGCGCCACGCCGACTTC GAGCCCGACGTGCGGGCCAAGGACAAGACGTACATCGAGTCCATCACGATTGTGCAGCACGGGCGGGACGGCCCG CAGGCGTTCCGGCCTCGGGCGGGCGACGTGGACGAGTCGTACGCGCTCGACCTGTCGCCGGACGGCCAGGTGCGG CTCGAGTGCCGCAACGCGGTCGGCTGCCTCTGGGGCCTTGAGACGTTCATCCAGCTCTTCTTCCAGCACAGCAGC GGGCGCGACTGGTACACGCCTCACGCGCCCGTCTCGATCCGGGACGCACCCAAGTTCCCGCACCGCGGTGTGCTG ATGGACGTGGCGCGGATGTGGTATCCCGTGGCCGACATCAAGCGCACCATCGACGGCATGGCCTGGAGCAAGATG AACCGGCTGCACCTGCACGCGACCGACTCGCAATCGTGGCCTCTGGAGATCCCGGCGCTGCCGCGGCTGGCGGAG AAGGGGGCGTACCGCCGGGGCCTGACGTACTCGCCGGCGGACCTGCGCGGCATCTGCGAGTACGCGGCCGAGCGC GGCGTCGAGGTAGTGCTCGAGATCGACATGCCGGGCCACACGGGCGTCATCGAGCTCGCGTACGAGGACCTCATC GTCGCCTACAACCAGAAGCCGTACCACTGGTACTGCGCCGAGCCGCCGTGCGGGGCGTTCCGGATGAACAGCAGC AAGGTCTACGACTTCGTCGACCGGCTGCTCGACGACCTGCTGCCGAGGCTGGCGCCCTACTCTGCCTACTTCCAC ACCGGCGGCGACGAGCTCAACAAAAACGACTCGGCGCTGGACCCGGGCGTCGGGTCCAACGACCAGGCCGTGATC GCGCCGCTGCTGCAGCGCTTCCTCGACCGCGTGCACGCCCGGGTGCGCAGGGCGGGCATGACGCCCTTTGTGTGG GAGGAGATGGTGACGGAGTGGAACCAGACGCTGCCGAACGACGTCGTGGTGCAGTCGTGGCTGGGCAACGGCGCG GTGCAGAAGCTGGCGAGGGCGGGCCGCAAGGTCATCGACAGCAACTTTAACTTTTGGTATCTCGACTGCGGGCGC GGCCAATGGCTCAACTTCGACAACGGGCCGGCCTTCCAGACGTACTACCCCTTCAACGACTGGTGCGGGCCGACG AAGAGCTGGCGGCTGGTGTACGCCAACGATCCGACGGCCGGACTGTCGGCCTCGGCGGCCAAGAACGTGCTGGGG GGCGAGGTGGCGATATGGAGCGAGCTGCTGGACAGCACCAACCTGGACAGCGTGCTGTGGCCGCGGGCCAGCGCG GCGGGCGAGGTGCTGTGGTCGGGGCGGCAGGACGCGTCGGGCCGGAACCGCAGCCAGTACGACGCGGCGCCGCGG CTGGCCGAGTTCCGCGAGCGCATGGTGGCCCGGGGGGTGTCGGCGATGCCGGTGCAGATGATCTTTTGCACGCAG GGCGACGCAACCGATTGCGCGATGCTGACGTCGTAG |
| Gene | >Hirsu2|10290 ATGCAGCCCAAGGCTGCCATGGCCCTGGTGGCGGCCGCCATGGCCCCGGGCCTCGTGGACGCGATATGGCCCGCG CCCGCCCAGATGATGACGGGCGACCGGGTCCTCTTTATCGGCAGGGACGTCAAGGCCTCGTACAACGGAGAGCCG CTGCCGTGCGCGGCCAATGGATTCCACAGGCAGCCCGGCCCCCGGTTCCGGAGCCGGGACGTGATCGCGGCCGGC CTCTCGCGCGCCATGGCCGCCATCCTGGAGCACAACTTCCACCCATGGAAGCTGCGGCCGCGCCACGCCGACTTC GAGCCCGACGTGCGGGCCAAGGACAAGACGTACATCGAGTCCATCACGATTGTGCAGCACGGGCGGGACGGCCCG CAGGCGTTCCGGCCTCGGGCGGGCGACGTGGACGAGTCGTACGCGCTCGACCTGTCGCCGGACGGCCAGGTGCGG CTCGAGTGCCGCAACGCGGTCGGCTGCCTCTGGGGCCTTGAGACGTTCATCCAGCTCTTCTTCCAGCACAGCAGC GGGCGCGACTGGTACACGCCTCACGCGCCCGTCTCGATCCGGGACGCACCCAAGTTCCCGCACCGCGGTGTGCTG ATGGACGTGGCGCGGATGTGGTATCCCGTGGCCGACATCAAGCGCACCATCGACGGCATGGCCTGGAGCAAGATG AACCGGCTGCACCTGCACGCGACCGACTCGCAATCGTGGCCTCTGGAGATCCCGGCGCTGCCGCGGCTGGCGGAG AAGGGGGCGTACCGCCGGGGCCTGACGTACTCGCCGGCGGACCTGCGCGGCATCTGCGAGTACGCGGCCGAGCGC GGCGTCGAGGTAGTGCTCGAGATCGACATGCCGGGCCACACGGGCGTCATCGAGCTCGCGTACGAGGACCTCATC GTCGCCTACAACCAGAAGCCGTACCACTGGTACTGCGCCGAGCCGCCGTGCGGGGCGTTCCGGATGAACAGCAGC AAGGTCTACGACTTCGTCGACCGGCTGCTCGACGACCTGCTGCCGAGGCTGGCGCCCTACTCTGCCTACTTCCAC ACCGGCGGCGACGAGCTCAACAAAAACGACTCGGCGCTGGACCCGGGCGTCGGGTCCAACGACCAGGCCGTGATC GCGCCGCTGCTGCAGCGCTTCCTCGACCGCGTGCACGCCCGGGTGCGCAGGGCGGGCATGACGCCCTTTGTGTGG GAGGAGATGGTGACGGAGTGGAACCAGACGCTGCCGAACGACGTCGTGGTGCAGTCGTGGCTGGGCAACGGCGCG GTGCAGAAGCTGGCGAGGGCGGGCCGCAAGGTCATCGACAGCAACTTTAACTTTTGGGTAGGTCGGGCTGCCCGG GCTTCTTGGTCCCTCTCGCTCTCCGGTCCCCCTCCTTCCCTCCCTCTCCCGCTCTCCCGATCCCTCTGTTTCTGG CTTCTTCGCCCTATTCCATTAGCGTGTGCGTGCTGACGGCGGCGGGGGCGGCGCAGTATCTCGACTGCGGGCGCG GCCAATGGCTCAACTTCGACAACGGGCCGGCCTTCCAGACGTACTACCCCTTCAACGACTGGTGCGGGCCGACGA AGAGCTGGCGGCTGGTGTACGCCAACGATCCGACGGCCGGACTGTCGGCCTCGGCGGCCAAGAACGTGCTGGGGG GCGAGGTGGCGATATGGAGCGAGCTGCTGGACAGCACCAACCTGGACAGCGTGCTGTGGCCGCGGGCCAGCGCGG CGGGCGAGGTGCTGTGGTCGGGGCGGCAGGACGCGTCGGGCCGGAACCGCAGCCAGTACGACGCGGCGCCGCGGC TGGCCGAGTTCCGCGAGCGCATGGTGGCCCGGGGGGTGTCGGCGATGCCGGTGCAGATGATCTTTTGCACGCAGG GCGACGCAACCGATTGCGCGATGCTGACGTCGTAG |