Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1029
Gene name
LocationContig_1212:2469..2832
Strand-
Gene length (bp)363
Transcript length (bp)363
Coding sequence length (bp)363
Protein length (aa) 121

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.4857 0.373 0.103 0.1787 0.4209 0.0087 0.0952 0.2411 0.0581 0.0044

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1171
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|6421
Ophiocordyceps subramaniannii Hirsu2|1028
Ophiocordyceps subramaniannii Hirsu2|1029 (this protein)
Ophiocordyceps subramaniannii Hirsu2|2484
Ophiocordyceps subramaniannii Hirsu2|2485
Ophiocordyceps subramaniannii Hirsu2|6060

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1029
MTYWDRLPLELKYTILKILADGDSSAMPKVRAGYACVSREWSYVFERTNFRRVSVSYTRIKSFKKYFTGQNERRQ
AYLEHLQVLILLKQYGCPACMHAEDRDTTEGYKVFRPAPVRKAGY*
Coding >Hirsu2|1029
ATGACCTACTGGGACAGGCTGCCCCTCGAATTAAAGTATACCATCCTCAAGATATTAGCAGACGGCGATAGCTCA
GCCATGCCCAAGGTGCGCGCCGGGTACGCTTGCGTAAGTAGGGAGTGGTCCTACGTCTTCGAGCGGACCAACTTC
CGGCGCGTCTCCGTGAGCTACACGCGCATCAAGTCTTTCAAGAAGTACTTCACCGGGCAGAACGAAAGGCGCCAA
GCCTACCTGGAGCACCTTCAAGTCCTGATCCTCCTCAAGCAATACGGCTGCCCGGCGTGCATGCATGCCGAGGAC
CGCGATACGACTGAAGGGTACAAGGTATTCCGGCCCGCGCCGGTGCGCAAAGCAGGCTATTGA
Transcript >Hirsu2|1029
ATGACCTACTGGGACAGGCTGCCCCTCGAATTAAAGTATACCATCCTCAAGATATTAGCAGACGGCGATAGCTCA
GCCATGCCCAAGGTGCGCGCCGGGTACGCTTGCGTAAGTAGGGAGTGGTCCTACGTCTTCGAGCGGACCAACTTC
CGGCGCGTCTCCGTGAGCTACACGCGCATCAAGTCTTTCAAGAAGTACTTCACCGGGCAGAACGAAAGGCGCCAA
GCCTACCTGGAGCACCTTCAAGTCCTGATCCTCCTCAAGCAATACGGCTGCCCGGCGTGCATGCATGCCGAGGAC
CGCGATACGACTGAAGGGTACAAGGTATTCCGGCCCGCGCCGGTGCGCAAAGCAGGCTATTGA
Gene >Hirsu2|1029
ATGACCTACTGGGACAGGCTGCCCCTCGAATTAAAGTATACCATCCTCAAGATATTAGCAGACGGCGATAGCTCA
GCCATGCCCAAGGTGCGCGCCGGGTACGCTTGCGTAAGTAGGGAGTGGTCCTACGTCTTCGAGCGGACCAACTTC
CGGCGCGTCTCCGTGAGCTACACGCGCATCAAGTCTTTCAAGAAGTACTTCACCGGGCAGAACGAAAGGCGCCAA
GCCTACCTGGAGCACCTTCAAGTCCTGATCCTCCTCAAGCAATACGGCTGCCCGGCGTGCATGCATGCCGAGGAC
CGCGATACGACTGAAGGGTACAAGGTATTCCGGCCCGCGCCGGTGCGCAAAGCAGGCTATTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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