Protein ID | Hirsu2|1027 |
Gene name | |
Location | Contig_1212:49..253 |
Strand | + |
Gene length (bp) | 204 |
Transcript length (bp) | 204 |
Coding sequence length (bp) | 204 |
Protein length (aa) | 68 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03061 | 4HBT | Thioesterase superfamily | 1.5E-04 | 1 | 41 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Peroxisome | Peroxisomal targeting signal | 0.5681 | 0.2829 | 0.0502 | 0.1354 | 0.1577 | 0.0159 | 0.3655 | 0.2748 | 0.0606 | 0.877 |
Orthofinder run ID | 4 |
Orthogroup | 6484 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1027 MHLSYLSAAARPGDVVRVQADADRVGGSLAFVSVRIARVDEASGLETVVALGRHTKYVKGTAPAERG* |
Coding | >Hirsu2|1027 ATGCACCTCAGCTACCTCAGCGCGGCCGCGCGCCCGGGCGACGTCGTCCGCGTCCAGGCCGACGCCGACCGCGTG GGCGGCAGCCTCGCGTTCGTGAGCGTGCGCATCGCCCGCGTCGACGAGGCGAGCGGGCTCGAGACGGTCGTCGCG CTCGGGCGCCATACCAAGTACGTCAAGGGGACGGCACCGGCGGAACGGGGCTGA |
Transcript | >Hirsu2|1027 ATGCACCTCAGCTACCTCAGCGCGGCCGCGCGCCCGGGCGACGTCGTCCGCGTCCAGGCCGACGCCGACCGCGTG GGCGGCAGCCTCGCGTTCGTGAGCGTGCGCATCGCCCGCGTCGACGAGGCGAGCGGGCTCGAGACGGTCGTCGCG CTCGGGCGCCATACCAAGTACGTCAAGGGGACGGCACCGGCGGAACGGGGCTGA |
Gene | >Hirsu2|1027 ATGCACCTCAGCTACCTCAGCGCGGCCGCGCGCCCGGGCGACGTCGTCCGCGTCCAGGCCGACGCCGACCGCGTG GGCGGCAGCCTCGCGTTCGTGAGCGTGCGCATCGCCCGCGTCGACGAGGCGAGCGGGCTCGAGACGGTCGTCGCG CTCGGGCGCCATACCAAGTACGTCAAGGGGACGGCACCGGCGGAACGGGGCTGA |