Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1027
Gene name
LocationContig_1212:49..253
Strand+
Gene length (bp)204
Transcript length (bp)204
Coding sequence length (bp)204
Protein length (aa) 68

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03061 4HBT Thioesterase superfamily 1.5E-04 1 41

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Peroxisome Peroxisomal targeting signal 0.5681 0.2829 0.0502 0.1354 0.1577 0.0159 0.3655 0.2748 0.0606 0.877

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6484
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5037
Ophiocordyceps australis map64 (Brazil) OphauB2|4029
Ophiocordyceps camponoti-floridani Ophcf2|06999
Ophiocordyceps subramaniannii Hirsu2|1027 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1027
MHLSYLSAAARPGDVVRVQADADRVGGSLAFVSVRIARVDEASGLETVVALGRHTKYVKGTAPAERG*
Coding >Hirsu2|1027
ATGCACCTCAGCTACCTCAGCGCGGCCGCGCGCCCGGGCGACGTCGTCCGCGTCCAGGCCGACGCCGACCGCGTG
GGCGGCAGCCTCGCGTTCGTGAGCGTGCGCATCGCCCGCGTCGACGAGGCGAGCGGGCTCGAGACGGTCGTCGCG
CTCGGGCGCCATACCAAGTACGTCAAGGGGACGGCACCGGCGGAACGGGGCTGA
Transcript >Hirsu2|1027
ATGCACCTCAGCTACCTCAGCGCGGCCGCGCGCCCGGGCGACGTCGTCCGCGTCCAGGCCGACGCCGACCGCGTG
GGCGGCAGCCTCGCGTTCGTGAGCGTGCGCATCGCCCGCGTCGACGAGGCGAGCGGGCTCGAGACGGTCGTCGCG
CTCGGGCGCCATACCAAGTACGTCAAGGGGACGGCACCGGCGGAACGGGGCTGA
Gene >Hirsu2|1027
ATGCACCTCAGCTACCTCAGCGCGGCCGCGCGCCCGGGCGACGTCGTCCGCGTCCAGGCCGACGCCGACCGCGTG
GGCGGCAGCCTCGCGTTCGTGAGCGTGCGCATCGCCCGCGTCGACGAGGCGAGCGGGCTCGAGACGGTCGTCGCG
CTCGGGCGCCATACCAAGTACGTCAAGGGGACGGCACCGGCGGAACGGGGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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