Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|10244
Gene name
Location	Contig_81:6056..7571
Strand	-
Gene length (bp)	1515
Transcript length (bp)	1446
Coding sequence length (bp)	1446
Protein length (aa)	482

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01490	Aa_trans	Transmembrane amino acid transporter protein	2.3E-47	65	458

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P38680\|MTR_NEUCR	N amino acid transport system protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mtr PE=3 SV=2	30	480	4.0E-166

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 28	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	71	93	22
2	98	120	22
3	141	163	22
4	178	195	17
5	202	224	22
6	251	273	22
7	286	308	22
8	328	350	22
9	371	393	22
10	398	420	22
11	441	463	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|10244 MGRPTSRTPAGPDRGFELDQWPRPGQGRPPPSEKQARDDVVVVGVGEVTDLDGEAARAADARFHRLGWKRLTVVL IVESVALGALGLPAAFASLGMVLGVFFCVSLGLVAVYTGFLVGEVKLKYPQVAHYADSGRLLMGRFGYELFGAMF VVSIIFVIGSHVLTGTIAFLKLTDNGGCSAAFGFLSAIILLVLAIPPSFADVAILGYIDFASILIAIGITIIATG IQASDGPGLTAINWSWRPKPDLSFVEAFVAISNIAFAYTFVVGQFSFMDEMHTPSDYMKSIWSLGMIEISIYTLT GAIIYAFVGVDVKSPALLSAGETVSKVAFGLALPVIFISGSINTTILGRYIQGRVLSKDSECHHVNTSKGWAIWL GIVSAVTFTAYIIAELIPFFSPLLSLLASLFVSGFSYYFPALMWFKLLREGPWYASKNILSCLASGLTFVVGIVI LICGSYASVADIIKRFTEGDVGEVFTCKPIG*
Coding	>Hirsu2\|10244 ATGGGTCGTCCGACCTCCCGTACCCCCGCCGGGCCGGACCGGGGATTCGAGCTCGACCAATGGCCGCGGCCGGGC CAGGGCCGCCCCCCGCCGTCCGAGAAGCAGGCACGCGACGATGTTGTCGTCGTCGGCGTCGGCGAGGTCACCGAC CTGGACGGTGAGGCCGCGCGCGCGGCCGATGCCCGCTTCCACCGCCTGGGCTGGAAGCGGCTGACCGTCGTCCTG ATCGTCGAGAGCGTCGCGCTCGGCGCACTCGGCCTGCCGGCCGCCTTCGCCTCGCTCGGCATGGTCCTCGGCGTC TTCTTCTGCGTCAGCCTCGGCCTCGTCGCCGTCTACACCGGCTTCCTCGTCGGCGAGGTCAAGCTCAAGTATCCC CAGGTGGCCCACTATGCCGATAGCGGGCGTCTCCTTATGGGCAGGTTCGGCTACGAGCTCTTTGGCGCCATGTTC GTCGTCTCCATCATCTTCGTCATCGGATCCCACGTCCTTACCGGCACCATCGCCTTCCTTAAGCTTACCGATAAC GGTGGCTGCTCTGCTGCTTTTGGCTTTCTCTCTGCTATTATCCTACTAGTCCTGGCCATCCCGCCCTCTTTCGCC GACGTCGCTATCCTCGGTTATATAGACTTTGCCTCTATCCTTATTGCTATCGGCATTACTATTATCGCTACCGGA ATCCAGGCCAGCGACGGCCCAGGCCTTACAGCCATAAATTGGTCTTGGCGGCCGAAGCCCGACCTTAGCTTTGTC GAAGCCTTTGTTGCCATTTCTAACATCGCCTTCGCCTATACCTTCGTCGTGGGCCAGTTCTCCTTTATGGACGAG ATGCATACGCCGAGCGATTACATGAAGTCGATCTGGTCTCTCGGAATGATCGAGATCAGCATCTATACCTTGACC GGCGCCATCATCTACGCCTTCGTAGGCGTCGACGTCAAGTCGCCGGCCCTCCTGTCGGCCGGGGAAACGGTGTCC AAGGTGGCTTTCGGGCTTGCGTTGCCCGTTATTTTCATTTCCGGGTCCATCAACACCACAATCCTCGGCCGCTAC ATCCAGGGCCGGGTCCTCAGCAAGGACTCGGAGTGTCACCACGTCAATACGTCGAAGGGCTGGGCCATCTGGCTG GGCATTGTATCTGCCGTTACCTTCACGGCGTACATAATTGCCGAGCTCATCCCGTTCTTTTCCCCTCTACTCTCC CTACTGGCCTCGCTCTTCGTTTCCGGCTTTTCCTACTACTTCCCCGCGTTGATGTGGTTCAAGCTCCTCCGCGAG GGCCCCTGGTATGCGAGCAAGAACATTTTGAGCTGCCTCGCGTCCGGCCTTACCTTTGTCGTCGGCATAGTCATC CTCATCTGTGGAAGTTATGCCAGTGTGGCCGACATTATCAAGAGGTTCACCGAGGGCGACGTCGGCGAGGTTTTC ACCTGCAAACCTATTGGATAG
Transcript	>Hirsu2\|10244 ATGGGTCGTCCGACCTCCCGTACCCCCGCCGGGCCGGACCGGGGATTCGAGCTCGACCAATGGCCGCGGCCGGGC CAGGGCCGCCCCCCGCCGTCCGAGAAGCAGGCACGCGACGATGTTGTCGTCGTCGGCGTCGGCGAGGTCACCGAC CTGGACGGTGAGGCCGCGCGCGCGGCCGATGCCCGCTTCCACCGCCTGGGCTGGAAGCGGCTGACCGTCGTCCTG ATCGTCGAGAGCGTCGCGCTCGGCGCACTCGGCCTGCCGGCCGCCTTCGCCTCGCTCGGCATGGTCCTCGGCGTC TTCTTCTGCGTCAGCCTCGGCCTCGTCGCCGTCTACACCGGCTTCCTCGTCGGCGAGGTCAAGCTCAAGTATCCC CAGGTGGCCCACTATGCCGATAGCGGGCGTCTCCTTATGGGCAGGTTCGGCTACGAGCTCTTTGGCGCCATGTTC GTCGTCTCCATCATCTTCGTCATCGGATCCCACGTCCTTACCGGCACCATCGCCTTCCTTAAGCTTACCGATAAC GGTGGCTGCTCTGCTGCTTTTGGCTTTCTCTCTGCTATTATCCTACTAGTCCTGGCCATCCCGCCCTCTTTCGCC GACGTCGCTATCCTCGGTTATATAGACTTTGCCTCTATCCTTATTGCTATCGGCATTACTATTATCGCTACCGGA ATCCAGGCCAGCGACGGCCCAGGCCTTACAGCCATAAATTGGTCTTGGCGGCCGAAGCCCGACCTTAGCTTTGTC GAAGCCTTTGTTGCCATTTCTAACATCGCCTTCGCCTATACCTTCGTCGTGGGCCAGTTCTCCTTTATGGACGAG ATGCATACGCCGAGCGATTACATGAAGTCGATCTGGTCTCTCGGAATGATCGAGATCAGCATCTATACCTTGACC GGCGCCATCATCTACGCCTTCGTAGGCGTCGACGTCAAGTCGCCGGCCCTCCTGTCGGCCGGGGAAACGGTGTCC AAGGTGGCTTTCGGGCTTGCGTTGCCCGTTATTTTCATTTCCGGGTCCATCAACACCACAATCCTCGGCCGCTAC ATCCAGGGCCGGGTCCTCAGCAAGGACTCGGAGTGTCACCACGTCAATACGTCGAAGGGCTGGGCCATCTGGCTG GGCATTGTATCTGCCGTTACCTTCACGGCGTACATAATTGCCGAGCTCATCCCGTTCTTTTCCCCTCTACTCTCC CTACTGGCCTCGCTCTTCGTTTCCGGCTTTTCCTACTACTTCCCCGCGTTGATGTGGTTCAAGCTCCTCCGCGAG GGCCCCTGGTATGCGAGCAAGAACATTTTGAGCTGCCTCGCGTCCGGCCTTACCTTTGTCGTCGGCATAGTCATC CTCATCTGTGGAAGTTATGCCAGTGTGGCCGACATTATCAAGAGGTTCACCGAGGGCGACGTCGGCGAGGTTTTC ACCTGCAAACCTATTGGATAG
Gene	>Hirsu2\|10244 ATGGGTCGTCCGACCTCCCGTACCCCCGCCGGGCCGGACCGGGGATTCGAGCTCGACCAATGGCCGCGGCCGGGC CAGGGCCGCCCCCCGCCGTCCGAGAAGCAGGCACGCGACGATGTTGTCGTCGTCGGCGTCGGCGAGGTCACCGAC CTGGACGGTGAGGCCGCGCGCGCGGCCGATGCCCGCTTCCACCGCCTGGGCTGGAAGCGGCTGACCGTCGTCCTG ATCGTCGAGAGCGTCGCGCTCGGCGCACTCGGCCTGCCGGCCGCCTTCGCCTCGCTCGGCATGGTCCTCGGCGTC TTCTTCTGCGTCAGCCTCGGCCTCGTCGCCGTCTACACCGGCTTCCTCGTCGGCGAGGTCAAGCTCAAGTATCCC CAGGTGGCCCACTATGCCGATAGCGGGCGTCTCCTTATGGGCAGGTTCGGCTACGAGCTCTTTGGCGCCATGTTC GTCGTCTCCATCATCTTCGTCATCGGATCCCACGTCCTTACCGGCACCATCGCCTTCCTTAAGCTTACCGATAAC GGTGGCTGCTCTGCTGCTTTTGGCTTTCTCTCTGCTATTATCCTACTAGTCCTGGCCATCCCGCCCTCTTTCGCC GACGTCGCTATCCTCGGTTATATAGACTTTGCCTCTATCCTTATTGCTATCGGCATTACTATTATCGCTACCGGA ATCCAGGCCAGCGACGGCCCAGGCCTTACAGCCATAAATTGGTCTTGGCGGCCGAAGCCCGACCTTAGCTTTGTC GAAGCCTTTGTTGCCATTTCTAACATCGCCTTCGCCTATACCTTCGTCGTGGGCCAGTTCTCCTTTATGGACGAG ATGCATACGCCGAGCGATTACATGAAGTCGATCTGGTCTCTCGGAATGATCGAGATCAGCATCTATACCTTGACC GGCGCCATCATCTACGCCTTCGTAGGCGTCGACGTCAAGTCGCCGGCCCTCCTGTCGGCCGGGGAAACGGTGTCC AAGGTGGCTTTCGGGCTTGCGTTGCCCGTTATTTTCATTTCCGGGTCCATCAACACCACAATCCTCGGCCGCTAC ATCCAGGGCCGGGTCCTCAGCAAGGACTCGGAGTGTCACCACGTCAATACGTCGAAGGGCTGGGCCATCTGGCTG GGCATTGTATCTGCCGTTACCTTCACGGCGTACATAATTGCCGAGCTCATCCCGTTCTTTTCCCCTCTACTCTCC CTACTGGCCTCGCTCTTCGTTTCCGGCTTTTCCTACTACTTCCCCGCGTTGATGTGGTTCAAGCTCCTCCGCGAG GGCCCCTGGTATGCGAGCAAGAACATTTTGAGCTGCCTCGCGTCCGGCCTTACCTTTGTCGTCGGCATAGTCATC CTCATCTGTGGAAGTTATGCCAGTGTGGCCGACATTGTGAGTCTCGTTACCGCCGGCCCGATGGGATCCCTCTCC GCTGCAATACTGACTGGCCGACGCGTCTAGATCAAGAGGTTCACCGAGGGCGACGTCGGCGAGGTTTTCACCTGC AAACCTATTGGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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