Protein ID | Hirsu2|10238 |
Gene name | |
Location | Contig_808:10441..12007 |
Strand | + |
Gene length (bp) | 1566 |
Transcript length (bp) | 1341 |
Coding sequence length (bp) | 1341 |
Protein length (aa) | 447 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q44091|SNDH_GLULI | L-sorbosone dehydrogenase OS=Gluconacetobacter liquefaciens PE=4 SV=1 | 41 | 434 | 9.0E-15 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1931 | 0.0943 | 0.7856 | 0.3307 | 0.2655 | 0.1284 | 0.3897 | 0.4845 | 0.1726 | 0.0203 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 20 | 0.999596 |
CAZyme category | E-value | Start | End |
---|---|---|---|
AA12 | 8.2E-135 | 34 | 426 |
Orthofinder run ID | 4 |
Orthogroup | 370 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10238 MARLLLVTTLCAAAAATAWASSSSSYCRHVRPAVALATVPGVEYRLLLGGLARPRAVVEDGEGNVLLVESKDRGV TRVVLSGGDDGGCVEAKAEPLIRDRRLNHGLALSADGRTLFASSASDVYAYAYDAVSGTAGPARHVIGGMQQGGH ATRTLLAPALHPDLLLVSRGSDGNVDPGTADVGSARSQIRVFRIAELLARRGKPVPYAAGAVLGWGLRNSVGVAQ EPTTGNIWSVENSLDDMRRGGRDIHNGNPGEELNLHGRPDDVHGPFYGRNYGYPACVTVFDPAGVGAYPGGAATG QPMAGDHMPANYSDGWCRRETLAPRLTFDAHLAPLGLAFADDGSAAYISFHGSWNRRPGIGYRVSRVAFADGQPV HASDSRDAEEKLLWNADESLCPYRCFRPVGLAVGRGGDRIFVTSDATGELVLLTGSGGRGYGRRRPGPSWT* |
Coding | >Hirsu2|10238 ATGGCGCGGCTGCTGCTGGTGACGACGCTGTGTGCGGCGGCGGCGGCGACGGCCTGGGCCTCGTCGTCGTCGTCG TACTGCCGGCACGTGCGGCCGGCGGTGGCGCTGGCGACGGTGCCGGGCGTCGAGTACCGGCTGCTGCTGGGCGGG CTGGCGCGGCCGCGCGCCGTCGTCGAGGACGGCGAGGGCAACGTGCTGCTGGTCGAGAGCAAGGACAGGGGCGTG ACGCGCGTGGTGCTGAGCGGCGGCGACGACGGCGGCTGCGTCGAGGCCAAGGCCGAGCCGCTGATCCGGGACCGA AGGCTCAACCACGGCCTGGCCCTGTCGGCCGACGGCCGGACCCTGTTCGCGTCGTCGGCGTCGGACGTCTACGCC TACGCCTACGACGCCGTCTCGGGCACGGCCGGCCCCGCGCGGCACGTCATCGGCGGCATGCAGCAGGGCGGGCAC GCGACGCGCACGCTGCTGGCGCCGGCGCTGCACCCGGACCTGCTGCTGGTGTCGCGCGGGTCCGACGGCAACGTC GACCCGGGCACGGCCGACGTCGGCTCGGCCCGCAGCCAGATCCGCGTCTTCCGCATCGCCGAGCTGCTGGCGCGG CGCGGCAAGCCGGTGCCGTACGCGGCCGGCGCCGTGCTGGGCTGGGGGCTGCGCAACAGCGTCGGCGTGGCGCAG GAGCCGACGACGGGCAACATCTGGTCGGTGGAGAACTCGCTCGACGACATGCGGCGCGGCGGCCGCGACATCCAC AACGGCAACCCGGGCGAGGAGCTCAACCTGCACGGGCGGCCCGACGACGTGCACGGCCCGTTCTACGGCCGCAAC TACGGCTACCCGGCCTGCGTCACCGTCTTCGACCCGGCCGGCGTGGGCGCCTACCCCGGCGGCGCGGCCACGGGG CAGCCCATGGCCGGCGACCACATGCCGGCCAACTACAGCGACGGCTGGTGCCGGCGCGAGACGCTGGCGCCGCGC CTGACCTTTGACGCGCACCTGGCGCCGCTGGGGCTGGCCTTTGCCGACGACGGCTCGGCCGCCTACATCTCCTTT CACGGGAGCTGGAACCGCAGGCCCGGCATCGGCTACCGCGTCAGCCGCGTCGCCTTCGCCGACGGCCAGCCCGTG CACGCCAGCGACAGCCGCGACGCCGAGGAGAAGCTGCTGTGGAACGCCGACGAGTCGCTGTGCCCGTACCGCTGC TTCCGGCCCGTCGGCCTGGCCGTCGGCCGCGGCGGCGACCGCATCTTCGTCACGAGCGACGCCACCGGCGAGCTC GTCCTGCTGACCGGCTCCGGGGGGCGGGGTTACGGCCGGCGCAGGCCCGGGCCGAGCTGGACGTGA |
Transcript | >Hirsu2|10238 ATGGCGCGGCTGCTGCTGGTGACGACGCTGTGTGCGGCGGCGGCGGCGACGGCCTGGGCCTCGTCGTCGTCGTCG TACTGCCGGCACGTGCGGCCGGCGGTGGCGCTGGCGACGGTGCCGGGCGTCGAGTACCGGCTGCTGCTGGGCGGG CTGGCGCGGCCGCGCGCCGTCGTCGAGGACGGCGAGGGCAACGTGCTGCTGGTCGAGAGCAAGGACAGGGGCGTG ACGCGCGTGGTGCTGAGCGGCGGCGACGACGGCGGCTGCGTCGAGGCCAAGGCCGAGCCGCTGATCCGGGACCGA AGGCTCAACCACGGCCTGGCCCTGTCGGCCGACGGCCGGACCCTGTTCGCGTCGTCGGCGTCGGACGTCTACGCC TACGCCTACGACGCCGTCTCGGGCACGGCCGGCCCCGCGCGGCACGTCATCGGCGGCATGCAGCAGGGCGGGCAC GCGACGCGCACGCTGCTGGCGCCGGCGCTGCACCCGGACCTGCTGCTGGTGTCGCGCGGGTCCGACGGCAACGTC GACCCGGGCACGGCCGACGTCGGCTCGGCCCGCAGCCAGATCCGCGTCTTCCGCATCGCCGAGCTGCTGGCGCGG CGCGGCAAGCCGGTGCCGTACGCGGCCGGCGCCGTGCTGGGCTGGGGGCTGCGCAACAGCGTCGGCGTGGCGCAG GAGCCGACGACGGGCAACATCTGGTCGGTGGAGAACTCGCTCGACGACATGCGGCGCGGCGGCCGCGACATCCAC AACGGCAACCCGGGCGAGGAGCTCAACCTGCACGGGCGGCCCGACGACGTGCACGGCCCGTTCTACGGCCGCAAC TACGGCTACCCGGCCTGCGTCACCGTCTTCGACCCGGCCGGCGTGGGCGCCTACCCCGGCGGCGCGGCCACGGGG CAGCCCATGGCCGGCGACCACATGCCGGCCAACTACAGCGACGGCTGGTGCCGGCGCGAGACGCTGGCGCCGCGC CTGACCTTTGACGCGCACCTGGCGCCGCTGGGGCTGGCCTTTGCCGACGACGGCTCGGCCGCCTACATCTCCTTT CACGGGAGCTGGAACCGCAGGCCCGGCATCGGCTACCGCGTCAGCCGCGTCGCCTTCGCCGACGGCCAGCCCGTG CACGCCAGCGACAGCCGCGACGCCGAGGAGAAGCTGCTGTGGAACGCCGACGAGTCGCTGTGCCCGTACCGCTGC TTCCGGCCCGTCGGCCTGGCCGTCGGCCGCGGCGGCGACCGCATCTTCGTCACGAGCGACGCCACCGGCGAGCTC GTCCTGCTGACCGGCTCCGGGGGGCGGGGTTACGGCCGGCGCAGGCCCGGGCCGAGCTGGACGTGA |
Gene | >Hirsu2|10238 ATGGCGCGGCTGCTGCTGGTGACGACGCTGTGTGCGGCGGCGGCGGCGACGGCCTGGGCCTCGTCGTCGTCGTCG TACTGCCGGCACGTGCGGCCGGCGGTGGCGCTGGCGACGGTGCCGGGCGTCGAGTACCGGCTGCTGCTGGGCGGG CTGGCGCGGCCGCGCGCCGTCGTCGAGGACGGCGAGGGCAACGTGCTGCTGGTCGAGAGCAAGGACAGGGGCGTG ACGCGCGTGGTGCTGAGCGGCGGCGACGACGGCGGCTGCGTCGAGGCCAAGGCCGAGCCGCTGATCCGGGACCGA AGGGTGCTGCTCTCCTCCCTCCTCCTCCTCGTCCTGCCAGAGCAGCGGACTGACCGACGGCGGCGCAGCTCAACC ACGGCCTGGCCCTGTCGGCCGACGGCCGGACCCTGTTCGCGTCGTCGGCGTCGGACGTCTACGCCTACGCCTACG ACGCCGTCTCGGGCACGGCCGGCCCCGCGCGGCACGTCATCGGCGGCATGCAGCAGGGCGGGCACGCGACGCGCA CGCTGCTGGCGCCGGCGCTGCACCCGGACCTGCTGCTGGTGTCGCGCGGGTCCGACGGCAACGTCGACCCGGGCA CGGCCGACGTCGGCTCGGCCCGCAGCCAGATCCGCGTCTTCCGCATCGCCGAGCTGCTGGCGCGGCGCGGCAAGC CGGTGCCGTACGCGGCCGGCGCCGTGCTGGGCTGGGGGCTGCGCAACAGCGTCGGCGTGGCGCAGGAGCCGACGA CGGGCAACATCGTGAGTCGTGTGACCCCTGGCACCGCCACCAGCCGGACTATTCGCTCTTTTTCCCCTGCCGTCT GACACGGACACGCAACGCGCACACAGTGGTCGGTGGAGAACTCGCTCGACGACATGCGGCGCGGCGGCCGCGACA TCCACAACGGCAACCCGGGCGAGGAGCTCAACCTGCACGGGCGGCCCGACGACGTGCACGGCCCGTTCTACGGCC GCAACTACGGCTACCCGGCCTGCGTCACCGTCTTCGACCCGGCCGGCGTGGGCGCCTACCCCGGCGGCGCGGCCA CGGGGCAGCCCATGGCCGGCGACCACATGCCGGCCAACTACAGCGACGGCTGGTGCCGGCGCGAGACGCTGGCGC CGCGCCTGACCTTTGACGCGCACCTGGCGCCGCTGGGGCTGGCCTTTGCCGACGACGGCTCGGCCGCCTACATCT CCTTTCACGGGAGCTGGTATTATTGCCTCTCCTCTCCTCCGCCCCTCCCTTTTCCCTCTCCGTCCGGCTGTTGAC GACGGCCCCAGGAACCGCAGGCCCGGCATCGGCTACCGCGTCAGCCGCGTCGCCTTCGCCGACGGCCAGCCCGTG CACGCCAGCGACAGCCGCGACGCCGAGGAGAAGCTGCTGTGGAACGCCGACGAGTCGCTGTGCCCGTACCGCTGC TTCCGGCCCGTCGGCCTGGCCGTCGGCCGCGGCGGCGACCGCATCTTCGTCACGAGCGACGCCACCGGCGAGCTC GTCCTGCTGACCGGCTCCGGGGGGCGGGGTTACGGCCGGCGCAGGCCCGGGCCGAGCTGGACGTGA |