Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10238
Gene name
LocationContig_808:10441..12007
Strand+
Gene length (bp)1566
Transcript length (bp)1341
Coding sequence length (bp)1341
Protein length (aa) 447

Overview

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q44091|SNDH_GLULI L-sorbosone dehydrogenase OS=Gluconacetobacter liquefaciens PE=4 SV=1 41 434 9.0E-15

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1931 0.0943 0.7856 0.3307 0.2655 0.1284 0.3897 0.4845 0.1726 0.0203

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.999596

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
AA12 8.2E-135 34 426

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup370
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|01409
Ophiocordyceps camponoti-floridani Ophcf2|04180
Ophiocordyceps camponoti-rufipedis Ophun1|1047
Ophiocordyceps camponoti-rufipedis Ophun1|6789
Ophiocordyceps kimflemingae Ophio5|2147
Ophiocordyceps kimflemingae Ophio5|2182
Ophiocordyceps subramaniannii Hirsu2|10238 (this protein)
Ophiocordyceps subramaniannii Hirsu2|152

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10238
MARLLLVTTLCAAAAATAWASSSSSYCRHVRPAVALATVPGVEYRLLLGGLARPRAVVEDGEGNVLLVESKDRGV
TRVVLSGGDDGGCVEAKAEPLIRDRRLNHGLALSADGRTLFASSASDVYAYAYDAVSGTAGPARHVIGGMQQGGH
ATRTLLAPALHPDLLLVSRGSDGNVDPGTADVGSARSQIRVFRIAELLARRGKPVPYAAGAVLGWGLRNSVGVAQ
EPTTGNIWSVENSLDDMRRGGRDIHNGNPGEELNLHGRPDDVHGPFYGRNYGYPACVTVFDPAGVGAYPGGAATG
QPMAGDHMPANYSDGWCRRETLAPRLTFDAHLAPLGLAFADDGSAAYISFHGSWNRRPGIGYRVSRVAFADGQPV
HASDSRDAEEKLLWNADESLCPYRCFRPVGLAVGRGGDRIFVTSDATGELVLLTGSGGRGYGRRRPGPSWT*
Coding >Hirsu2|10238
ATGGCGCGGCTGCTGCTGGTGACGACGCTGTGTGCGGCGGCGGCGGCGACGGCCTGGGCCTCGTCGTCGTCGTCG
TACTGCCGGCACGTGCGGCCGGCGGTGGCGCTGGCGACGGTGCCGGGCGTCGAGTACCGGCTGCTGCTGGGCGGG
CTGGCGCGGCCGCGCGCCGTCGTCGAGGACGGCGAGGGCAACGTGCTGCTGGTCGAGAGCAAGGACAGGGGCGTG
ACGCGCGTGGTGCTGAGCGGCGGCGACGACGGCGGCTGCGTCGAGGCCAAGGCCGAGCCGCTGATCCGGGACCGA
AGGCTCAACCACGGCCTGGCCCTGTCGGCCGACGGCCGGACCCTGTTCGCGTCGTCGGCGTCGGACGTCTACGCC
TACGCCTACGACGCCGTCTCGGGCACGGCCGGCCCCGCGCGGCACGTCATCGGCGGCATGCAGCAGGGCGGGCAC
GCGACGCGCACGCTGCTGGCGCCGGCGCTGCACCCGGACCTGCTGCTGGTGTCGCGCGGGTCCGACGGCAACGTC
GACCCGGGCACGGCCGACGTCGGCTCGGCCCGCAGCCAGATCCGCGTCTTCCGCATCGCCGAGCTGCTGGCGCGG
CGCGGCAAGCCGGTGCCGTACGCGGCCGGCGCCGTGCTGGGCTGGGGGCTGCGCAACAGCGTCGGCGTGGCGCAG
GAGCCGACGACGGGCAACATCTGGTCGGTGGAGAACTCGCTCGACGACATGCGGCGCGGCGGCCGCGACATCCAC
AACGGCAACCCGGGCGAGGAGCTCAACCTGCACGGGCGGCCCGACGACGTGCACGGCCCGTTCTACGGCCGCAAC
TACGGCTACCCGGCCTGCGTCACCGTCTTCGACCCGGCCGGCGTGGGCGCCTACCCCGGCGGCGCGGCCACGGGG
CAGCCCATGGCCGGCGACCACATGCCGGCCAACTACAGCGACGGCTGGTGCCGGCGCGAGACGCTGGCGCCGCGC
CTGACCTTTGACGCGCACCTGGCGCCGCTGGGGCTGGCCTTTGCCGACGACGGCTCGGCCGCCTACATCTCCTTT
CACGGGAGCTGGAACCGCAGGCCCGGCATCGGCTACCGCGTCAGCCGCGTCGCCTTCGCCGACGGCCAGCCCGTG
CACGCCAGCGACAGCCGCGACGCCGAGGAGAAGCTGCTGTGGAACGCCGACGAGTCGCTGTGCCCGTACCGCTGC
TTCCGGCCCGTCGGCCTGGCCGTCGGCCGCGGCGGCGACCGCATCTTCGTCACGAGCGACGCCACCGGCGAGCTC
GTCCTGCTGACCGGCTCCGGGGGGCGGGGTTACGGCCGGCGCAGGCCCGGGCCGAGCTGGACGTGA
Transcript >Hirsu2|10238
ATGGCGCGGCTGCTGCTGGTGACGACGCTGTGTGCGGCGGCGGCGGCGACGGCCTGGGCCTCGTCGTCGTCGTCG
TACTGCCGGCACGTGCGGCCGGCGGTGGCGCTGGCGACGGTGCCGGGCGTCGAGTACCGGCTGCTGCTGGGCGGG
CTGGCGCGGCCGCGCGCCGTCGTCGAGGACGGCGAGGGCAACGTGCTGCTGGTCGAGAGCAAGGACAGGGGCGTG
ACGCGCGTGGTGCTGAGCGGCGGCGACGACGGCGGCTGCGTCGAGGCCAAGGCCGAGCCGCTGATCCGGGACCGA
AGGCTCAACCACGGCCTGGCCCTGTCGGCCGACGGCCGGACCCTGTTCGCGTCGTCGGCGTCGGACGTCTACGCC
TACGCCTACGACGCCGTCTCGGGCACGGCCGGCCCCGCGCGGCACGTCATCGGCGGCATGCAGCAGGGCGGGCAC
GCGACGCGCACGCTGCTGGCGCCGGCGCTGCACCCGGACCTGCTGCTGGTGTCGCGCGGGTCCGACGGCAACGTC
GACCCGGGCACGGCCGACGTCGGCTCGGCCCGCAGCCAGATCCGCGTCTTCCGCATCGCCGAGCTGCTGGCGCGG
CGCGGCAAGCCGGTGCCGTACGCGGCCGGCGCCGTGCTGGGCTGGGGGCTGCGCAACAGCGTCGGCGTGGCGCAG
GAGCCGACGACGGGCAACATCTGGTCGGTGGAGAACTCGCTCGACGACATGCGGCGCGGCGGCCGCGACATCCAC
AACGGCAACCCGGGCGAGGAGCTCAACCTGCACGGGCGGCCCGACGACGTGCACGGCCCGTTCTACGGCCGCAAC
TACGGCTACCCGGCCTGCGTCACCGTCTTCGACCCGGCCGGCGTGGGCGCCTACCCCGGCGGCGCGGCCACGGGG
CAGCCCATGGCCGGCGACCACATGCCGGCCAACTACAGCGACGGCTGGTGCCGGCGCGAGACGCTGGCGCCGCGC
CTGACCTTTGACGCGCACCTGGCGCCGCTGGGGCTGGCCTTTGCCGACGACGGCTCGGCCGCCTACATCTCCTTT
CACGGGAGCTGGAACCGCAGGCCCGGCATCGGCTACCGCGTCAGCCGCGTCGCCTTCGCCGACGGCCAGCCCGTG
CACGCCAGCGACAGCCGCGACGCCGAGGAGAAGCTGCTGTGGAACGCCGACGAGTCGCTGTGCCCGTACCGCTGC
TTCCGGCCCGTCGGCCTGGCCGTCGGCCGCGGCGGCGACCGCATCTTCGTCACGAGCGACGCCACCGGCGAGCTC
GTCCTGCTGACCGGCTCCGGGGGGCGGGGTTACGGCCGGCGCAGGCCCGGGCCGAGCTGGACGTGA
Gene >Hirsu2|10238
ATGGCGCGGCTGCTGCTGGTGACGACGCTGTGTGCGGCGGCGGCGGCGACGGCCTGGGCCTCGTCGTCGTCGTCG
TACTGCCGGCACGTGCGGCCGGCGGTGGCGCTGGCGACGGTGCCGGGCGTCGAGTACCGGCTGCTGCTGGGCGGG
CTGGCGCGGCCGCGCGCCGTCGTCGAGGACGGCGAGGGCAACGTGCTGCTGGTCGAGAGCAAGGACAGGGGCGTG
ACGCGCGTGGTGCTGAGCGGCGGCGACGACGGCGGCTGCGTCGAGGCCAAGGCCGAGCCGCTGATCCGGGACCGA
AGGGTGCTGCTCTCCTCCCTCCTCCTCCTCGTCCTGCCAGAGCAGCGGACTGACCGACGGCGGCGCAGCTCAACC
ACGGCCTGGCCCTGTCGGCCGACGGCCGGACCCTGTTCGCGTCGTCGGCGTCGGACGTCTACGCCTACGCCTACG
ACGCCGTCTCGGGCACGGCCGGCCCCGCGCGGCACGTCATCGGCGGCATGCAGCAGGGCGGGCACGCGACGCGCA
CGCTGCTGGCGCCGGCGCTGCACCCGGACCTGCTGCTGGTGTCGCGCGGGTCCGACGGCAACGTCGACCCGGGCA
CGGCCGACGTCGGCTCGGCCCGCAGCCAGATCCGCGTCTTCCGCATCGCCGAGCTGCTGGCGCGGCGCGGCAAGC
CGGTGCCGTACGCGGCCGGCGCCGTGCTGGGCTGGGGGCTGCGCAACAGCGTCGGCGTGGCGCAGGAGCCGACGA
CGGGCAACATCGTGAGTCGTGTGACCCCTGGCACCGCCACCAGCCGGACTATTCGCTCTTTTTCCCCTGCCGTCT
GACACGGACACGCAACGCGCACACAGTGGTCGGTGGAGAACTCGCTCGACGACATGCGGCGCGGCGGCCGCGACA
TCCACAACGGCAACCCGGGCGAGGAGCTCAACCTGCACGGGCGGCCCGACGACGTGCACGGCCCGTTCTACGGCC
GCAACTACGGCTACCCGGCCTGCGTCACCGTCTTCGACCCGGCCGGCGTGGGCGCCTACCCCGGCGGCGCGGCCA
CGGGGCAGCCCATGGCCGGCGACCACATGCCGGCCAACTACAGCGACGGCTGGTGCCGGCGCGAGACGCTGGCGC
CGCGCCTGACCTTTGACGCGCACCTGGCGCCGCTGGGGCTGGCCTTTGCCGACGACGGCTCGGCCGCCTACATCT
CCTTTCACGGGAGCTGGTATTATTGCCTCTCCTCTCCTCCGCCCCTCCCTTTTCCCTCTCCGTCCGGCTGTTGAC
GACGGCCCCAGGAACCGCAGGCCCGGCATCGGCTACCGCGTCAGCCGCGTCGCCTTCGCCGACGGCCAGCCCGTG
CACGCCAGCGACAGCCGCGACGCCGAGGAGAAGCTGCTGTGGAACGCCGACGAGTCGCTGTGCCCGTACCGCTGC
TTCCGGCCCGTCGGCCTGGCCGTCGGCCGCGGCGGCGACCGCATCTTCGTCACGAGCGACGCCACCGGCGAGCTC
GTCCTGCTGACCGGCTCCGGGGGGCGGGGTTACGGCCGGCGCAGGCCCGGGCCGAGCTGGACGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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