© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10218 |
| Gene name | |
| Location | Contig_803:10044..11395 |
| Strand | + |
| Gene length (bp) | 1351 |
| Transcript length (bp) | 1230 |
| Coding sequence length (bp) | 1230 |
| Protein length (aa) | 410 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07732 | Cu-oxidase_3 | Multicopper oxidase | 7.2E-08 | 119 | 229 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9JTB8|ANIA_NEIMA | Copper-containing nitrite reductase OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=aniA PE=3 SV=1 | 86 | 392 | 2.0E-77 |
| sp|Q9JYE1|ANIA_NEIMB | Copper-containing nitrite reductase OS=Neisseria meningitidis serogroup B (strain MC58) GN=aniA PE=3 SV=1 | 79 | 392 | 8.0E-77 |
| sp|Q02219|ANIA_NEIGO | Copper-containing nitrite reductase OS=Neisseria gonorrhoeae GN=aniA PE=1 SV=1 | 86 | 396 | 8.0E-77 |
| sp|Q92Z29|NIRK_RHIME | Copper-containing nitrite reductase OS=Rhizobium meliloti (strain 1021) GN=nirK PE=3 SV=1 | 82 | 400 | 8.0E-35 |
| sp|Q01537|NIR_RHIGA | Copper-containing nitrite reductase OS=Rhizobium galegae GN=nirU PE=3 SV=1 | 134 | 392 | 1.0E-32 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9JTB8|ANIA_NEIMA | Copper-containing nitrite reductase OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=aniA PE=3 SV=1 | 86 | 392 | 2.0E-77 |
| sp|Q9JYE1|ANIA_NEIMB | Copper-containing nitrite reductase OS=Neisseria meningitidis serogroup B (strain MC58) GN=aniA PE=3 SV=1 | 79 | 392 | 8.0E-77 |
| sp|Q02219|ANIA_NEIGO | Copper-containing nitrite reductase OS=Neisseria gonorrhoeae GN=aniA PE=1 SV=1 | 86 | 396 | 8.0E-77 |
| sp|Q92Z29|NIRK_RHIME | Copper-containing nitrite reductase OS=Rhizobium meliloti (strain 1021) GN=nirK PE=3 SV=1 | 82 | 400 | 8.0E-35 |
| sp|Q01537|NIR_RHIGA | Copper-containing nitrite reductase OS=Rhizobium galegae GN=nirU PE=3 SV=1 | 134 | 392 | 1.0E-32 |
| sp|Q60214|NIR_RHISU | Copper-containing nitrite reductase OS=Rhizobium sullae GN=nirK PE=3 SV=1 | 82 | 400 | 2.0E-31 |
| sp|Q53239|NIR_RHOS5 | Copper-containing nitrite reductase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=nirK PE=1 SV=2 | 99 | 392 | 2.0E-29 |
| sp|P81445|NIR_ALCXX | Copper-containing nitrite reductase OS=Alcaligenes xylosoxydans xylosoxydans GN=nirK PE=1 SV=1 | 134 | 402 | 9.0E-28 |
| sp|P25006|NIR_ACHCY | Copper-containing nitrite reductase OS=Achromobacter cycloclastes GN=nirK PE=1 SV=2 | 82 | 400 | 1.0E-27 |
| sp|Q06006|NIR_PSECL | Copper-containing nitrite reductase OS=Pseudomonas chlororaphis GN=nirK PE=1 SV=1 | 89 | 403 | 2.0E-27 |
| sp|P38501|NIR_ALCFA | Copper-containing nitrite reductase OS=Alcaligenes faecalis GN=nirK PE=1 SV=1 | 135 | 400 | 6.0E-27 |
| sp|Q40588|ASO_TOBAC | L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1 | 118 | 283 | 8.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005507 | copper ion binding | Yes |
| GO:0046872 | metal ion binding | No |
| GO:0005488 | binding | No |
| GO:0043167 | ion binding | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0043169 | cation binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10218 MSTQSKTPDHGPRARLVSMAAAFATVAVGIGIYTMRQDPFQAGFAPGSRQAVSEKPLAASIRPAGQPSDASFYEA LDDEVPDVETLPVEEAQLLSAPNVPPPIRRDHAVLLKVPLTTSTKTAQVTNQYKYEQWTFNGTVPGPFIRARVGD VVELTLTNRDGTGNPHNIDSHAFTGPGGGAAVTTAEENETKMARFRLLCPGLYVYHCAAAPVPVHIANGMYGLMY VQPAEGDLPAVDREYYVMQSELYHEPPEVLDDGRPSGTVEFSYPNGLREEPNAVVFNGSESALTRDRPLKAAAGE TVRIFFGNAGPNLTSSLHLIGSHFRRVYRDGDVVSAPGRFVGTVAVPPGGATVVDLKMVVPGTYTLVDHAIFRLD KGAVGFLNVSGPPRPDVYGSREPPAPCVGCKLHA* |
| Coding | >Hirsu2|10218 ATGAGCACGCAGTCCAAGACGCCAGACCATGGCCCCCGTGCTAGACTGGTATCCATGGCGGCCGCTTTCGCCACC GTTGCGGTTGGTATCGGCATATATACCATGCGACAGGACCCATTTCAGGCGGGTTTCGCGCCGGGGAGCCGCCAG GCCGTTTCCGAGAAGCCGCTTGCCGCCTCCATCCGTCCGGCCGGCCAGCCGTCAGACGCCAGCTTCTACGAGGCT TTGGATGACGAAGTCCCGGACGTAGAGACGCTTCCAGTCGAGGAGGCGCAGCTTCTGAGCGCCCCCAACGTCCCC CCACCCATCCGGCGGGACCACGCCGTGCTCCTCAAGGTGCCGCTGACGACGTCGACCAAGACGGCGCAGGTGACG AACCAGTACAAGTACGAGCAGTGGACCTTCAACGGGACGGTGCCCGGCCCCTTCATCCGGGCGCGCGTGGGCGAC GTGGTGGAGCTGACGCTCACGAACCGGGACGGCACGGGCAACCCGCACAACATCGACAGCCACGCCTTCACCGGG CCCGGCGGAGGGGCGGCGGTGACGACGGCCGAGGAGAACGAGACCAAGATGGCGCGCTTCCGGCTGCTGTGCCCG GGCCTGTACGTGTACCACTGCGCGGCGGCGCCGGTGCCGGTGCACATCGCCAACGGCATGTACGGGCTCATGTAC GTGCAGCCGGCCGAGGGCGACCTGCCGGCCGTCGACCGCGAGTACTACGTGATGCAGAGCGAGCTGTACCACGAG CCGCCCGAGGTGCTCGACGACGGCCGGCCGTCCGGGACGGTCGAGTTCTCGTACCCCAACGGGCTGCGCGAGGAG CCGAACGCGGTCGTCTTTAACGGCAGCGAGTCGGCCCTGACGCGGGACCGGCCTCTCAAGGCGGCCGCCGGCGAG ACGGTCCGCATCTTCTTCGGCAACGCGGGGCCCAACCTGACCAGCTCGCTGCACCTCATCGGCAGCCACTTCCGG CGCGTCTACCGCGACGGCGACGTCGTCAGCGCGCCGGGCCGCTTCGTCGGCACCGTCGCCGTCCCGCCCGGCGGC GCCACCGTCGTCGACCTCAAGATGGTCGTCCCGGGCACCTACACCCTCGTCGACCACGCCATCTTCCGCCTCGAC AAGGGCGCCGTCGGCTTCCTCAACGTGTCCGGGCCCCCGCGGCCCGACGTCTACGGCAGCCGCGAGCCGCCGGCG CCGTGCGTCGGCTGCAAGCTGCACGCGTGA |
| Transcript | >Hirsu2|10218 ATGAGCACGCAGTCCAAGACGCCAGACCATGGCCCCCGTGCTAGACTGGTATCCATGGCGGCCGCTTTCGCCACC GTTGCGGTTGGTATCGGCATATATACCATGCGACAGGACCCATTTCAGGCGGGTTTCGCGCCGGGGAGCCGCCAG GCCGTTTCCGAGAAGCCGCTTGCCGCCTCCATCCGTCCGGCCGGCCAGCCGTCAGACGCCAGCTTCTACGAGGCT TTGGATGACGAAGTCCCGGACGTAGAGACGCTTCCAGTCGAGGAGGCGCAGCTTCTGAGCGCCCCCAACGTCCCC CCACCCATCCGGCGGGACCACGCCGTGCTCCTCAAGGTGCCGCTGACGACGTCGACCAAGACGGCGCAGGTGACG AACCAGTACAAGTACGAGCAGTGGACCTTCAACGGGACGGTGCCCGGCCCCTTCATCCGGGCGCGCGTGGGCGAC GTGGTGGAGCTGACGCTCACGAACCGGGACGGCACGGGCAACCCGCACAACATCGACAGCCACGCCTTCACCGGG CCCGGCGGAGGGGCGGCGGTGACGACGGCCGAGGAGAACGAGACCAAGATGGCGCGCTTCCGGCTGCTGTGCCCG GGCCTGTACGTGTACCACTGCGCGGCGGCGCCGGTGCCGGTGCACATCGCCAACGGCATGTACGGGCTCATGTAC GTGCAGCCGGCCGAGGGCGACCTGCCGGCCGTCGACCGCGAGTACTACGTGATGCAGAGCGAGCTGTACCACGAG CCGCCCGAGGTGCTCGACGACGGCCGGCCGTCCGGGACGGTCGAGTTCTCGTACCCCAACGGGCTGCGCGAGGAG CCGAACGCGGTCGTCTTTAACGGCAGCGAGTCGGCCCTGACGCGGGACCGGCCTCTCAAGGCGGCCGCCGGCGAG ACGGTCCGCATCTTCTTCGGCAACGCGGGGCCCAACCTGACCAGCTCGCTGCACCTCATCGGCAGCCACTTCCGG CGCGTCTACCGCGACGGCGACGTCGTCAGCGCGCCGGGCCGCTTCGTCGGCACCGTCGCCGTCCCGCCCGGCGGC GCCACCGTCGTCGACCTCAAGATGGTCGTCCCGGGCACCTACACCCTCGTCGACCACGCCATCTTCCGCCTCGAC AAGGGCGCCGTCGGCTTCCTCAACGTGTCCGGGCCCCCGCGGCCCGACGTCTACGGCAGCCGCGAGCCGCCGGCG CCGTGCGTCGGCTGCAAGCTGCACGCGTGA |
| Gene | >Hirsu2|10218 ATGAGCACGCAGTCCAAGACGCCAGACCATGGCCCCCGTGCTAGACTGGTATCCATGGCGGCCGCTTTCGCCACC GTTGCGGTTGGTATCGGCATATATACCATGCGACAGGACCCATTTCAGGCGGGTTTCGCGCCGGGGAGCCGCCAG GCCGTTTCCGAGAAGCCGGTGAGAGTCTCTTGAACAGGCTGTCGGGTAGCGGCAGTCCTTGTGGTCGTTCCACGC CCGGAACACGCAGTGCACGCACATGTGAGGCCGTTACCCAGCTAACTCTGCCGCCGACTGCAAGCTTGCCGCCTC CATCCGTCCGGCCGGCCAGCCGTCAGACGCCAGCTTCTACGAGGCTTTGGATGACGAAGTCCCGGACGTAGAGAC GCTTCCAGTCGAGGAGGCGCAGCTTCTGAGCGCCCCCAACGTCCCCCCACCCATCCGGCGGGACCACGCCGTGCT CCTCAAGGTGCCGCTGACGACGTCGACCAAGACGGCGCAGGTGACGAACCAGTACAAGTACGAGCAGTGGACCTT CAACGGGACGGTGCCCGGCCCCTTCATCCGGGCGCGCGTGGGCGACGTGGTGGAGCTGACGCTCACGAACCGGGA CGGCACGGGCAACCCGCACAACATCGACAGCCACGCCTTCACCGGGCCCGGCGGAGGGGCGGCGGTGACGACGGC CGAGGAGAACGAGACCAAGATGGCGCGCTTCCGGCTGCTGTGCCCGGGCCTGTACGTGTACCACTGCGCGGCGGC GCCGGTGCCGGTGCACATCGCCAACGGCATGTACGGGCTCATGTACGTGCAGCCGGCCGAGGGCGACCTGCCGGC CGTCGACCGCGAGTACTACGTGATGCAGAGCGAGCTGTACCACGAGCCGCCCGAGGTGCTCGACGACGGCCGGCC GTCCGGGACGGTCGAGTTCTCGTACCCCAACGGGCTGCGCGAGGAGCCGAACGCGGTCGTCTTTAACGGCAGCGA GTCGGCCCTGACGCGGGACCGGCCTCTCAAGGCGGCCGCCGGCGAGACGGTCCGCATCTTCTTCGGCAACGCGGG GCCCAACCTGACCAGCTCGCTGCACCTCATCGGCAGCCACTTCCGGCGCGTCTACCGCGACGGCGACGTCGTCAG CGCGCCGGGCCGCTTCGTCGGCACCGTCGCCGTCCCGCCCGGCGGCGCCACCGTCGTCGACCTCAAGATGGTCGT CCCGGGCACCTACACCCTCGTCGACCACGCCATCTTCCGCCTCGACAAGGGCGCCGTCGGCTTCCTCAACGTGTC CGGGCCCCCGCGGCCCGACGTCTACGGCAGCCGCGAGCCGCCGGCGCCGTGCGTCGGCTGCAAGCTGCACGCGTG A |