Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10216
Gene name
LocationContig_803:6409..7540
Strand-
Gene length (bp)1131
Transcript length (bp)1131
Coding sequence length (bp)1131
Protein length (aa) 377

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20055 DUF6454 Family of unknown function (DUF6454) 2.3E-47 86 374

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Lysosome/Vacuole Signal peptide 0.2613 0.1295 0.6226 0.257 0.2604 0.1058 0.5677 0.5982 0.6192 0.0116

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 2 24 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup8424
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|10216 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10216
MALAAASLLALAITGALLAPLTGWKRATPAPLDANLMGELAACGAAPPPPLTPSRNVTFHRDVPLAPWPLPAPHA
ESDGEAIVELFQALGRSTVWRSVANVSFEGDTFEPEGMVRLGPDRFVVSCGEYTERTERYGRIVNGTDRSPGKGF
AHLVVFDGQGRRIADATITRAGALEYHNGGIDYDGRFIWGTVGQYRPNSTALVYKADPSVLEPRPVVRYADHLGG
IVRDGPDDSIACLNWGSRSAAIWGLGRVGAGCDDGAGAVPSPVPRTVVRNPSSFVDYQDCKWLGRSRFYGGRSVM
LCSGVATVGGYDLGGVALVDVASMAPLAEVPVALESALGVRMTQNPVDVSVHRGRLRFYWLPDQRNSTLYVYEAQ
P*
Coding >Hirsu2|10216
ATGGCTCTGGCGGCCGCGTCCCTACTGGCGCTGGCCATCACGGGCGCGCTCCTCGCGCCCTTGACGGGCTGGAAG
AGGGCGACGCCAGCGCCCTTGGACGCCAACCTCATGGGCGAGCTCGCGGCATGCGGCGCTGCTCCGCCGCCGCCG
CTGACTCCCTCGCGCAACGTCACCTTCCATCGGGACGTTCCGCTCGCGCCGTGGCCTCTCCCGGCGCCGCACGCC
GAGTCCGACGGCGAGGCCATTGTCGAGCTGTTCCAGGCCCTCGGCCGGTCCACGGTGTGGCGGAGCGTCGCCAAC
GTCTCCTTCGAGGGCGACACGTTCGAGCCCGAGGGCATGGTCCGGCTCGGGCCCGACCGGTTCGTCGTCAGCTGC
GGCGAGTACACGGAGCGGACGGAGCGGTACGGACGCATCGTCAACGGCACCGACCGGTCGCCCGGTAAGGGATTC
GCGCACCTTGTCGTCTTCGACGGCCAGGGGCGGCGCATTGCCGACGCCACCATCACCAGGGCAGGCGCGCTGGAA
TACCACAACGGCGGCATCGACTACGATGGCCGCTTCATCTGGGGCACCGTCGGCCAGTATCGGCCCAACAGCACC
GCGCTCGTCTACAAGGCCGACCCCTCAGTTCTCGAGCCCCGGCCCGTCGTCCGCTACGCCGACCACCTCGGCGGC
ATCGTCCGCGACGGCCCGGACGACAGCATCGCCTGCCTGAACTGGGGCTCGCGCAGCGCCGCGATCTGGGGCCTG
GGCCGCGTCGGCGCGGGGTGCGACGACGGCGCCGGCGCCGTTCCGTCGCCGGTGCCCCGAACCGTGGTGCGCAAC
CCGAGCTCCTTCGTCGACTACCAGGACTGCAAGTGGCTCGGCCGCAGCCGCTTCTACGGCGGCAGAAGCGTCATG
CTCTGCTCCGGCGTTGCAACCGTCGGCGGCTACGACCTCGGCGGCGTGGCGCTCGTCGACGTGGCCTCCATGGCG
CCGCTGGCCGAGGTGCCCGTCGCGTTGGAGAGCGCGCTGGGCGTGCGCATGACGCAGAATCCCGTCGACGTGAGC
GTCCATCGCGGGAGGCTGAGGTTCTACTGGCTGCCCGACCAGCGCAACAGCACCCTGTACGTGTACGAGGCGCAG
CCGTGA
Transcript >Hirsu2|10216
ATGGCTCTGGCGGCCGCGTCCCTACTGGCGCTGGCCATCACGGGCGCGCTCCTCGCGCCCTTGACGGGCTGGAAG
AGGGCGACGCCAGCGCCCTTGGACGCCAACCTCATGGGCGAGCTCGCGGCATGCGGCGCTGCTCCGCCGCCGCCG
CTGACTCCCTCGCGCAACGTCACCTTCCATCGGGACGTTCCGCTCGCGCCGTGGCCTCTCCCGGCGCCGCACGCC
GAGTCCGACGGCGAGGCCATTGTCGAGCTGTTCCAGGCCCTCGGCCGGTCCACGGTGTGGCGGAGCGTCGCCAAC
GTCTCCTTCGAGGGCGACACGTTCGAGCCCGAGGGCATGGTCCGGCTCGGGCCCGACCGGTTCGTCGTCAGCTGC
GGCGAGTACACGGAGCGGACGGAGCGGTACGGACGCATCGTCAACGGCACCGACCGGTCGCCCGGTAAGGGATTC
GCGCACCTTGTCGTCTTCGACGGCCAGGGGCGGCGCATTGCCGACGCCACCATCACCAGGGCAGGCGCGCTGGAA
TACCACAACGGCGGCATCGACTACGATGGCCGCTTCATCTGGGGCACCGTCGGCCAGTATCGGCCCAACAGCACC
GCGCTCGTCTACAAGGCCGACCCCTCAGTTCTCGAGCCCCGGCCCGTCGTCCGCTACGCCGACCACCTCGGCGGC
ATCGTCCGCGACGGCCCGGACGACAGCATCGCCTGCCTGAACTGGGGCTCGCGCAGCGCCGCGATCTGGGGCCTG
GGCCGCGTCGGCGCGGGGTGCGACGACGGCGCCGGCGCCGTTCCGTCGCCGGTGCCCCGAACCGTGGTGCGCAAC
CCGAGCTCCTTCGTCGACTACCAGGACTGCAAGTGGCTCGGCCGCAGCCGCTTCTACGGCGGCAGAAGCGTCATG
CTCTGCTCCGGCGTTGCAACCGTCGGCGGCTACGACCTCGGCGGCGTGGCGCTCGTCGACGTGGCCTCCATGGCG
CCGCTGGCCGAGGTGCCCGTCGCGTTGGAGAGCGCGCTGGGCGTGCGCATGACGCAGAATCCCGTCGACGTGAGC
GTCCATCGCGGGAGGCTGAGGTTCTACTGGCTGCCCGACCAGCGCAACAGCACCCTGTACGTGTACGAGGCGCAG
CCGTGA
Gene >Hirsu2|10216
ATGGCTCTGGCGGCCGCGTCCCTACTGGCGCTGGCCATCACGGGCGCGCTCCTCGCGCCCTTGACGGGCTGGAAG
AGGGCGACGCCAGCGCCCTTGGACGCCAACCTCATGGGCGAGCTCGCGGCATGCGGCGCTGCTCCGCCGCCGCCG
CTGACTCCCTCGCGCAACGTCACCTTCCATCGGGACGTTCCGCTCGCGCCGTGGCCTCTCCCGGCGCCGCACGCC
GAGTCCGACGGCGAGGCCATTGTCGAGCTGTTCCAGGCCCTCGGCCGGTCCACGGTGTGGCGGAGCGTCGCCAAC
GTCTCCTTCGAGGGCGACACGTTCGAGCCCGAGGGCATGGTCCGGCTCGGGCCCGACCGGTTCGTCGTCAGCTGC
GGCGAGTACACGGAGCGGACGGAGCGGTACGGACGCATCGTCAACGGCACCGACCGGTCGCCCGGTAAGGGATTC
GCGCACCTTGTCGTCTTCGACGGCCAGGGGCGGCGCATTGCCGACGCCACCATCACCAGGGCAGGCGCGCTGGAA
TACCACAACGGCGGCATCGACTACGATGGCCGCTTCATCTGGGGCACCGTCGGCCAGTATCGGCCCAACAGCACC
GCGCTCGTCTACAAGGCCGACCCCTCAGTTCTCGAGCCCCGGCCCGTCGTCCGCTACGCCGACCACCTCGGCGGC
ATCGTCCGCGACGGCCCGGACGACAGCATCGCCTGCCTGAACTGGGGCTCGCGCAGCGCCGCGATCTGGGGCCTG
GGCCGCGTCGGCGCGGGGTGCGACGACGGCGCCGGCGCCGTTCCGTCGCCGGTGCCCCGAACCGTGGTGCGCAAC
CCGAGCTCCTTCGTCGACTACCAGGACTGCAAGTGGCTCGGCCGCAGCCGCTTCTACGGCGGCAGAAGCGTCATG
CTCTGCTCCGGCGTTGCAACCGTCGGCGGCTACGACCTCGGCGGCGTGGCGCTCGTCGACGTGGCCTCCATGGCG
CCGCTGGCCGAGGTGCCCGTCGCGTTGGAGAGCGCGCTGGGCGTGCGCATGACGCAGAATCCCGTCGACGTGAGC
GTCCATCGCGGGAGGCTGAGGTTCTACTGGCTGCCCGACCAGCGCAACAGCACCCTGTACGTGTACGAGGCGCAG
CCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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