Protein ID | Hirsu2|10216 |
Gene name | |
Location | Contig_803:6409..7540 |
Strand | - |
Gene length (bp) | 1131 |
Transcript length (bp) | 1131 |
Coding sequence length (bp) | 1131 |
Protein length (aa) | 377 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF20055 | DUF6454 | Family of unknown function (DUF6454) | 2.3E-47 | 86 | 374 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 19 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 2 | 24 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10216 MALAAASLLALAITGALLAPLTGWKRATPAPLDANLMGELAACGAAPPPPLTPSRNVTFHRDVPLAPWPLPAPHA ESDGEAIVELFQALGRSTVWRSVANVSFEGDTFEPEGMVRLGPDRFVVSCGEYTERTERYGRIVNGTDRSPGKGF AHLVVFDGQGRRIADATITRAGALEYHNGGIDYDGRFIWGTVGQYRPNSTALVYKADPSVLEPRPVVRYADHLGG IVRDGPDDSIACLNWGSRSAAIWGLGRVGAGCDDGAGAVPSPVPRTVVRNPSSFVDYQDCKWLGRSRFYGGRSVM LCSGVATVGGYDLGGVALVDVASMAPLAEVPVALESALGVRMTQNPVDVSVHRGRLRFYWLPDQRNSTLYVYEAQ P* |
Coding | >Hirsu2|10216 ATGGCTCTGGCGGCCGCGTCCCTACTGGCGCTGGCCATCACGGGCGCGCTCCTCGCGCCCTTGACGGGCTGGAAG AGGGCGACGCCAGCGCCCTTGGACGCCAACCTCATGGGCGAGCTCGCGGCATGCGGCGCTGCTCCGCCGCCGCCG CTGACTCCCTCGCGCAACGTCACCTTCCATCGGGACGTTCCGCTCGCGCCGTGGCCTCTCCCGGCGCCGCACGCC GAGTCCGACGGCGAGGCCATTGTCGAGCTGTTCCAGGCCCTCGGCCGGTCCACGGTGTGGCGGAGCGTCGCCAAC GTCTCCTTCGAGGGCGACACGTTCGAGCCCGAGGGCATGGTCCGGCTCGGGCCCGACCGGTTCGTCGTCAGCTGC GGCGAGTACACGGAGCGGACGGAGCGGTACGGACGCATCGTCAACGGCACCGACCGGTCGCCCGGTAAGGGATTC GCGCACCTTGTCGTCTTCGACGGCCAGGGGCGGCGCATTGCCGACGCCACCATCACCAGGGCAGGCGCGCTGGAA TACCACAACGGCGGCATCGACTACGATGGCCGCTTCATCTGGGGCACCGTCGGCCAGTATCGGCCCAACAGCACC GCGCTCGTCTACAAGGCCGACCCCTCAGTTCTCGAGCCCCGGCCCGTCGTCCGCTACGCCGACCACCTCGGCGGC ATCGTCCGCGACGGCCCGGACGACAGCATCGCCTGCCTGAACTGGGGCTCGCGCAGCGCCGCGATCTGGGGCCTG GGCCGCGTCGGCGCGGGGTGCGACGACGGCGCCGGCGCCGTTCCGTCGCCGGTGCCCCGAACCGTGGTGCGCAAC CCGAGCTCCTTCGTCGACTACCAGGACTGCAAGTGGCTCGGCCGCAGCCGCTTCTACGGCGGCAGAAGCGTCATG CTCTGCTCCGGCGTTGCAACCGTCGGCGGCTACGACCTCGGCGGCGTGGCGCTCGTCGACGTGGCCTCCATGGCG CCGCTGGCCGAGGTGCCCGTCGCGTTGGAGAGCGCGCTGGGCGTGCGCATGACGCAGAATCCCGTCGACGTGAGC GTCCATCGCGGGAGGCTGAGGTTCTACTGGCTGCCCGACCAGCGCAACAGCACCCTGTACGTGTACGAGGCGCAG CCGTGA |
Transcript | >Hirsu2|10216 ATGGCTCTGGCGGCCGCGTCCCTACTGGCGCTGGCCATCACGGGCGCGCTCCTCGCGCCCTTGACGGGCTGGAAG AGGGCGACGCCAGCGCCCTTGGACGCCAACCTCATGGGCGAGCTCGCGGCATGCGGCGCTGCTCCGCCGCCGCCG CTGACTCCCTCGCGCAACGTCACCTTCCATCGGGACGTTCCGCTCGCGCCGTGGCCTCTCCCGGCGCCGCACGCC GAGTCCGACGGCGAGGCCATTGTCGAGCTGTTCCAGGCCCTCGGCCGGTCCACGGTGTGGCGGAGCGTCGCCAAC GTCTCCTTCGAGGGCGACACGTTCGAGCCCGAGGGCATGGTCCGGCTCGGGCCCGACCGGTTCGTCGTCAGCTGC GGCGAGTACACGGAGCGGACGGAGCGGTACGGACGCATCGTCAACGGCACCGACCGGTCGCCCGGTAAGGGATTC GCGCACCTTGTCGTCTTCGACGGCCAGGGGCGGCGCATTGCCGACGCCACCATCACCAGGGCAGGCGCGCTGGAA TACCACAACGGCGGCATCGACTACGATGGCCGCTTCATCTGGGGCACCGTCGGCCAGTATCGGCCCAACAGCACC GCGCTCGTCTACAAGGCCGACCCCTCAGTTCTCGAGCCCCGGCCCGTCGTCCGCTACGCCGACCACCTCGGCGGC ATCGTCCGCGACGGCCCGGACGACAGCATCGCCTGCCTGAACTGGGGCTCGCGCAGCGCCGCGATCTGGGGCCTG GGCCGCGTCGGCGCGGGGTGCGACGACGGCGCCGGCGCCGTTCCGTCGCCGGTGCCCCGAACCGTGGTGCGCAAC CCGAGCTCCTTCGTCGACTACCAGGACTGCAAGTGGCTCGGCCGCAGCCGCTTCTACGGCGGCAGAAGCGTCATG CTCTGCTCCGGCGTTGCAACCGTCGGCGGCTACGACCTCGGCGGCGTGGCGCTCGTCGACGTGGCCTCCATGGCG CCGCTGGCCGAGGTGCCCGTCGCGTTGGAGAGCGCGCTGGGCGTGCGCATGACGCAGAATCCCGTCGACGTGAGC GTCCATCGCGGGAGGCTGAGGTTCTACTGGCTGCCCGACCAGCGCAACAGCACCCTGTACGTGTACGAGGCGCAG CCGTGA |
Gene | >Hirsu2|10216 ATGGCTCTGGCGGCCGCGTCCCTACTGGCGCTGGCCATCACGGGCGCGCTCCTCGCGCCCTTGACGGGCTGGAAG AGGGCGACGCCAGCGCCCTTGGACGCCAACCTCATGGGCGAGCTCGCGGCATGCGGCGCTGCTCCGCCGCCGCCG CTGACTCCCTCGCGCAACGTCACCTTCCATCGGGACGTTCCGCTCGCGCCGTGGCCTCTCCCGGCGCCGCACGCC GAGTCCGACGGCGAGGCCATTGTCGAGCTGTTCCAGGCCCTCGGCCGGTCCACGGTGTGGCGGAGCGTCGCCAAC GTCTCCTTCGAGGGCGACACGTTCGAGCCCGAGGGCATGGTCCGGCTCGGGCCCGACCGGTTCGTCGTCAGCTGC GGCGAGTACACGGAGCGGACGGAGCGGTACGGACGCATCGTCAACGGCACCGACCGGTCGCCCGGTAAGGGATTC GCGCACCTTGTCGTCTTCGACGGCCAGGGGCGGCGCATTGCCGACGCCACCATCACCAGGGCAGGCGCGCTGGAA TACCACAACGGCGGCATCGACTACGATGGCCGCTTCATCTGGGGCACCGTCGGCCAGTATCGGCCCAACAGCACC GCGCTCGTCTACAAGGCCGACCCCTCAGTTCTCGAGCCCCGGCCCGTCGTCCGCTACGCCGACCACCTCGGCGGC ATCGTCCGCGACGGCCCGGACGACAGCATCGCCTGCCTGAACTGGGGCTCGCGCAGCGCCGCGATCTGGGGCCTG GGCCGCGTCGGCGCGGGGTGCGACGACGGCGCCGGCGCCGTTCCGTCGCCGGTGCCCCGAACCGTGGTGCGCAAC CCGAGCTCCTTCGTCGACTACCAGGACTGCAAGTGGCTCGGCCGCAGCCGCTTCTACGGCGGCAGAAGCGTCATG CTCTGCTCCGGCGTTGCAACCGTCGGCGGCTACGACCTCGGCGGCGTGGCGCTCGTCGACGTGGCCTCCATGGCG CCGCTGGCCGAGGTGCCCGTCGCGTTGGAGAGCGCGCTGGGCGTGCGCATGACGCAGAATCCCGTCGACGTGAGC GTCCATCGCGGGAGGCTGAGGTTCTACTGGCTGCCCGACCAGCGCAACAGCACCCTGTACGTGTACGAGGCGCAG CCGTGA |